RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 RUSC2Q8N2Y8 1516 aa32.71■■■□□ 2.83
NDUFS3-213ENST00000534716 CUL7Q14999 1698 aa32.69■■■□□ 2.82
NDUFS3-213ENST00000534716 KIAA0586Q9BVV6 1533 aa32.62■■■□□ 2.81
NDUFS3-213ENST00000534716 AEBP2Q6ZN18 517 aaPredicted RBP32.59■■■□□ 2.81
NDUFS3-213ENST00000534716 CARMIL1Q5VZK9 1371 aa32.57■■■□□ 2.8
NDUFS3-213ENST00000534716 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
NDUFS3-213ENST00000534716 ADCY10Q96PN6 1610 aa32.29■■■□□ 2.76
NDUFS3-213ENST00000534716 IQGAP2Q13576 1575 aa32.28■■■□□ 2.76
NDUFS3-213ENST00000534716 NPM1P06748 294 aaKnown RBP eCLIP32.28■■■□□ 2.76
NDUFS3-213ENST00000534716 CARMIL2Q6F5E8 1435 aa32.26■■■□□ 2.76
NDUFS3-213ENST00000534716 MAPKBP1O60336 1514 aa32.26■■■□□ 2.76
NDUFS3-213ENST00000534716 PTPRGP23470 1445 aa32.25■■■□□ 2.75
NDUFS3-213ENST00000534716 TNIKQ9UKE5 1360 aa32.22■■■□□ 2.75
NDUFS3-213ENST00000534716 ABCC10Q5T3U5 1492 aa32.2■■■□□ 2.75
NDUFS3-213ENST00000534716 KIF13AQ9H1H9 1805 aa32.19■■■□□ 2.74
NDUFS3-213ENST00000534716 DISP1Q96F81 1524 aa32.16■■■□□ 2.74
NDUFS3-213ENST00000534716 UGGT2Q9NYU1 1516 aa32.14■■■□□ 2.74
NDUFS3-213ENST00000534716 FAM69CQ0P6D2 419 aa32.11■■■□□ 2.73
NDUFS3-213ENST00000534716 DIP2BQ9P265 1576 aa32.08■■■□□ 2.73
NDUFS3-213ENST00000534716 UHRF1BP1LA0JNW5 1464 aa32.07■■■□□ 2.72
NDUFS3-213ENST00000534716 PRXQ9BXM0 1461 aa32.06■■■□□ 2.72
NDUFS3-213ENST00000534716 ABCC2Q92887 1545 aa32.05■■■□□ 2.72
NDUFS3-213ENST00000534716 TTBK1Q5TCY1 1321 aaPredicted RBP32.01■■■□□ 2.72
NDUFS3-213ENST00000534716 UACAQ9BZF9 1416 aa32.01■■■□□ 2.72
NDUFS3-213ENST00000534716 KIAA0556O60303 1618 aa31.98■■■□□ 2.71
NDUFS3-213ENST00000534716 CTTNBP2Q8WZ74 1663 aa31.94■■■□□ 2.7
NDUFS3-213ENST00000534716 PLB1Q6P1J6 1458 aa31.91■■■□□ 2.7
NDUFS3-213ENST00000534716 ASXL2Q76L83 1435 aa31.91■■■□□ 2.7
NDUFS3-213ENST00000534716 KDM5BQ9UGL1 1544 aa31.9■■■□□ 2.7
NDUFS3-213ENST00000534716 GOLGA3Q08378 1498 aa31.89■■■□□ 2.7
NDUFS3-213ENST00000534716 CSRNP3Q8WYN3 585 aa31.84■■■□□ 2.69
NDUFS3-213ENST00000534716 GLI2P10070 1586 aa31.83■■■□□ 2.69
NDUFS3-213ENST00000534716 EEA1Q15075 1411 aa31.78■■■□□ 2.68
NDUFS3-213ENST00000534716 ZCCHC11Q5TAX3 1644 aaKnown RBP31.75■■■□□ 2.67
NDUFS3-213ENST00000534716 EPRSP07814 1512 aaKnown RBP31.72■■■□□ 2.67
NDUFS3-213ENST00000534716 ABCA8O94911 1581 aa31.71■■■□□ 2.67
NDUFS3-213ENST00000534716 KDM6BO15054 1643 aa31.71■■■□□ 2.67
NDUFS3-213ENST00000534716 TSPOAP1O95153 1857 aa31.69■■■□□ 2.66
NDUFS3-213ENST00000534716 PPRC1Q5VV67 1664 aaKnown RBP31.64■■■□□ 2.66
NDUFS3-213ENST00000534716 WDR7Q9Y4E6 1490 aa31.64■■■□□ 2.66
NDUFS3-213ENST00000534716 MAP3K4Q9Y6R4 1608 aa31.61■■■□□ 2.65
NDUFS3-213ENST00000534716 SAMD9Q5K651 1589 aa31.58■■■□□ 2.65
NDUFS3-213ENST00000534716 FAM9AQ8IZU1 332 aaPredicted RBP31.57■■■□□ 2.64
NDUFS3-213ENST00000534716 TEX14Q8IWB6 1497 aa31.53■■■□□ 2.64
NDUFS3-213ENST00000534716 P3H3Q8IVL6 736 aa31.52■■■□□ 2.64
NDUFS3-213ENST00000534716 ATP10BO94823 1461 aa31.46■■■□□ 2.63
NDUFS3-213ENST00000534716 COL17A1Q9UMD9 1497 aaPredicted RBP31.46■■■□□ 2.63
NDUFS3-213ENST00000534716 KIF21BO75037 1637 aa31.46■■■□□ 2.63
NDUFS3-213ENST00000534716 MAGI3Q5TCQ9 1506 aa31.43■■■□□ 2.62
NDUFS3-213ENST00000534716 CHIC1Q5VXU3 224 aa31.42■■■□□ 2.62
NDUFS3-213ENST00000534716 CD109Q6YHK3 1445 aa31.41■■■□□ 2.62
NDUFS3-213ENST00000534716 KCNH8Q96L42 1107 aa31.41■■■□□ 2.62
NDUFS3-213ENST00000534716 CFAP43Q8NDM7 1665 aa31.41■■■□□ 2.62
NDUFS3-213ENST00000534716 RAPGEF6Q8TEU7 1601 aa31.37■■■□□ 2.61
NDUFS3-213ENST00000534716 KDM4FA0A1W2PPD8 638 aa31.35■■■□□ 2.61
NDUFS3-213ENST00000534716 FHOD3Q2V2M9 1422 aa31.32■■■□□ 2.61
NDUFS3-213ENST00000534716 EFCAB5A4FU69 1503 aa31.32■■■□□ 2.6
NDUFS3-213ENST00000534716 ARID3CA6NKF2 412 aa31.31■■■□□ 2.6
NDUFS3-213ENST00000534716 NUP153P49790 1475 aaKnown RBP31.3■■■□□ 2.6
NDUFS3-213ENST00000534716 RANGAP1P46060 587 aaPredicted RBP31.28■■■□□ 2.6
NDUFS3-213ENST00000534716 ABCA9Q8IUA7 1624 aa31.23■■■□□ 2.59
NDUFS3-213ENST00000534716 ARAP3Q8WWN8 1544 aa31.18■■■□□ 2.58
NDUFS3-213ENST00000534716 PHLDB1Q86UU1 1377 aa31.17■■■□□ 2.58
NDUFS3-213ENST00000534716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.17■■■□□ 2.58
NDUFS3-213ENST00000534716 HNRNPUL2Q1KMD3 747 aaKnown RBP31.17■■■□□ 2.58
NDUFS3-213ENST00000534716 UBTFP17480 764 aaKnown RBP31.16■■■□□ 2.58
NDUFS3-213ENST00000534716 ILDR1Q86SU0 546 aaPredicted RBP31.15■■■□□ 2.58
NDUFS3-213ENST00000534716 ADGRL1O94910 1474 aa31.12■■■□□ 2.57
NDUFS3-213ENST00000534716 PLEKHD1A6NEE1 506 aa31.11■■■□□ 2.57
NDUFS3-213ENST00000534716 NEO1Q92859 1461 aa31.08■■■□□ 2.57
NDUFS3-213ENST00000534716 ARHGAP35Q9NRY4 1499 aa31.06■■■□□ 2.56
NDUFS3-213ENST00000534716 FMN1Q68DA7 1419 aa31.05■■■□□ 2.56
NDUFS3-213ENST00000534716 EHMT2Q96KQ7 1210 aa31.04■■■□□ 2.56
NDUFS3-213ENST00000534716 CDK13Q14004 1512 aaKnown RBP30.96■■■□□ 2.55
NDUFS3-213ENST00000534716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.96■■■□□ 2.551e-6■■■■□ 25.1
NDUFS3-213ENST00000534716 HECW1Q76N89 1606 aa30.92■■■□□ 2.54
NDUFS3-213ENST00000534716 RAPGEF3O95398 923 aa30.92■■■□□ 2.54
NDUFS3-213ENST00000534716 FRMPD1Q5SYB0 1578 aa30.88■■■□□ 2.53
NDUFS3-213ENST00000534716 TTC37Q6PGP7 1564 aa30.88■■■□□ 2.53
NDUFS3-213ENST00000534716 AKNAQ7Z591 1439 aa30.87■■■□□ 2.53
NDUFS3-213ENST00000534716 FANCAO15360 1455 aa30.87■■■□□ 2.53
NDUFS3-213ENST00000534716 CFAP74Q9C0B2 1584 aa30.86■■■□□ 2.53
NDUFS3-213ENST00000534716 CDK11AQ9UQ88 783 aaPredicted RBP30.84■■■□□ 2.53
NDUFS3-213ENST00000534716 ATP1B4Q9UN42 357 aaPredicted RBP30.83■■■□□ 2.53
NDUFS3-213ENST00000534716 DENND4BO75064 1496 aaPredicted RBP30.82■■■□□ 2.53
NDUFS3-213ENST00000534716 PLCH2O75038 1416 aa30.81■■■□□ 2.52
NDUFS3-213ENST00000534716 RICTORQ6R327 1708 aa30.76■■■□□ 2.51
NDUFS3-213ENST00000534716 TROQ12816 1431 aaPredicted RBP30.75■■■□□ 2.51
NDUFS3-213ENST00000534716 CASKIN1Q8WXD9 1431 aa30.74■■■□□ 2.51
NDUFS3-213ENST00000534716 ZMYM4Q5VZL5 1548 aa30.7■■■□□ 2.51
NDUFS3-213ENST00000534716 ARHGEF40Q8TER5 1519 aa30.7■■■□□ 2.51
NDUFS3-213ENST00000534716 CLIP1P30622 1438 aa30.69■■■□□ 2.5
NDUFS3-213ENST00000534716 LRRIQ1Q96JM4 1722 aa30.68■■■□□ 2.5
NDUFS3-213ENST00000534716 KIF14Q15058 1648 aa30.68■■■□□ 2.5
NDUFS3-213ENST00000534716 EFCAB2Q5VUJ9 269 aa30.67■■■□□ 2.5
NDUFS3-213ENST00000534716 CCDC18Q5T9S5 1454 aa30.67■■■□□ 2.5
NDUFS3-213ENST00000534716 MAGI2Q86UL8 1455 aa30.67■■■□□ 2.5
NDUFS3-213ENST00000534716 ADAMTSL3P82987 1691 aa30.67■■■□□ 2.5
NDUFS3-213ENST00000534716 SCAPERQ9BY12 1400 aa30.65■■■□□ 2.5
NDUFS3-213ENST00000534716 PCF11O94913 1555 aaKnown RBP30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms