RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 PRXQ9BXM0 1461 aa23.56■■□□□ 1.36
VPS11-205ENST00000534551 CTTNBP2Q8WZ74 1663 aa23.55■■□□□ 1.36
VPS11-205ENST00000534551 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
VPS11-205ENST00000534551 ARAP1Q96P48 1450 aa23.54■■□□□ 1.36
VPS11-205ENST00000534551 EEA1Q15075 1411 aa23.53■■□□□ 1.36
VPS11-205ENST00000534551 IQGAP2Q13576 1575 aa23.49■■□□□ 1.35
VPS11-205ENST00000534551 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
VPS11-205ENST00000534551 CSRNP3Q8WYN3 585 aa23.46■■□□□ 1.35
VPS11-205ENST00000534551 KIF21BO75037 1637 aa23.44■■□□□ 1.34
VPS11-205ENST00000534551 PRG4Q92954 1404 aaPredicted RBP23.42■■□□□ 1.34
VPS11-205ENST00000534551 JPH4Q96JJ6 628 aa23.38■■□□□ 1.33
VPS11-205ENST00000534551 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
VPS11-205ENST00000534551 UGGT2Q9NYU1 1516 aa23.32■■□□□ 1.32
VPS11-205ENST00000534551 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
VPS11-205ENST00000534551 KIAA0556O60303 1618 aa23.3■■□□□ 1.32
VPS11-205ENST00000534551 DISP1Q96F81 1524 aa23.3■■□□□ 1.32
VPS11-205ENST00000534551 GOLGA3Q08378 1498 aa23.25■■□□□ 1.31
VPS11-205ENST00000534551 CARMIL2Q6F5E8 1435 aa23.19■■□□□ 1.3
VPS11-205ENST00000534551 ADCY10Q96PN6 1610 aa23.19■■□□□ 1.3
VPS11-205ENST00000534551 SAMD9Q5K651 1589 aa23.18■■□□□ 1.3
VPS11-205ENST00000534551 TTBK1Q5TCY1 1321 aaPredicted RBP23.17■■□□□ 1.3
VPS11-205ENST00000534551 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.29
VPS11-205ENST00000534551 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
VPS11-205ENST00000534551 PTPRGP23470 1445 aa23.1■■□□□ 1.29
VPS11-205ENST00000534551 UBTFP17480 764 aaKnown RBP23.08■■□□□ 1.29
VPS11-205ENST00000534551 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
VPS11-205ENST00000534551 EFCAB5A4FU69 1503 aa23.03■■□□□ 1.28
VPS11-205ENST00000534551 FHOD3Q2V2M9 1422 aa23.03■■□□□ 1.28
VPS11-205ENST00000534551 PLB1Q6P1J6 1458 aa23.02■■□□□ 1.28
VPS11-205ENST00000534551 ABCC2Q92887 1545 aa23.02■■□□□ 1.28
VPS11-205ENST00000534551 ABCA8O94911 1581 aa23■■□□□ 1.27
VPS11-205ENST00000534551 UACAQ9BZF9 1416 aa22.98■■□□□ 1.27
VPS11-205ENST00000534551 ARHGAP35Q9NRY4 1499 aa22.97■■□□□ 1.27
VPS11-205ENST00000534551 ZCCHC11Q5TAX3 1644 aaKnown RBP22.97■■□□□ 1.27
VPS11-205ENST00000534551 UHRF1BP1LA0JNW5 1464 aa22.96■■□□□ 1.27
VPS11-205ENST00000534551 RAPGEF6Q8TEU7 1601 aa22.93■■□□□ 1.26
VPS11-205ENST00000534551 KIF13AQ9H1H9 1805 aa22.92■■□□□ 1.26
VPS11-205ENST00000534551 MAPKBP1O60336 1514 aa22.91■■□□□ 1.26
VPS11-205ENST00000534551 KDM5BQ9UGL1 1544 aa22.87■■□□□ 1.25
VPS11-205ENST00000534551 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
VPS11-205ENST00000534551 DIP2BQ9P265 1576 aa22.84■■□□□ 1.25
VPS11-205ENST00000534551 ARID3CA6NKF2 412 aa22.82■■□□□ 1.24
VPS11-205ENST00000534551 CLIP1P30622 1438 aa22.82■■□□□ 1.24
VPS11-205ENST00000534551 NUP153P49790 1475 aaKnown RBP22.81■■□□□ 1.24
VPS11-205ENST00000534551 TRHP20396 242 aaPredicted RBP22.81■■□□□ 1.24
VPS11-205ENST00000534551 LRRIQ1Q96JM4 1722 aa22.81■■□□□ 1.24
VPS11-205ENST00000534551 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
VPS11-205ENST00000534551 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
VPS11-205ENST00000534551 CEP162Q5TB80 1403 aa22.79■■□□□ 1.24
VPS11-205ENST00000534551 ASXL2Q76L83 1435 aa22.79■■□□□ 1.24
VPS11-205ENST00000534551 ABCC10Q5T3U5 1492 aa22.75■■□□□ 1.23
VPS11-205ENST00000534551 HECW1Q76N89 1606 aa22.75■■□□□ 1.23
VPS11-205ENST00000534551 ATP10BO94823 1461 aa22.74■■□□□ 1.23
VPS11-205ENST00000534551 TSPOAP1O95153 1857 aa22.74■■□□□ 1.23
VPS11-205ENST00000534551 CDK13Q14004 1512 aaKnown RBP22.73■■□□□ 1.23
VPS11-205ENST00000534551 FMN1Q68DA7 1419 aa22.73■■□□□ 1.23
VPS11-205ENST00000534551 WDR7Q9Y4E6 1490 aa22.71■■□□□ 1.23
VPS11-205ENST00000534551 EPRSP07814 1512 aaKnown RBP22.67■■□□□ 1.22
VPS11-205ENST00000534551 PPRC1Q5VV67 1664 aaKnown RBP22.65■■□□□ 1.22
VPS11-205ENST00000534551 GLI2P10070 1586 aa22.64■■□□□ 1.22
VPS11-205ENST00000534551 MAP3K4Q9Y6R4 1608 aa22.64■■□□□ 1.21
VPS11-205ENST00000534551 FAM69CQ0P6D2 419 aa22.63■■□□□ 1.21
VPS11-205ENST00000534551 CASKIN1Q8WXD9 1431 aa22.61■■□□□ 1.21
VPS11-205ENST00000534551 FYCO1Q9BQS8 1478 aa22.6■■□□□ 1.21
VPS11-205ENST00000534551 ATP1B4Q9UN42 357 aaPredicted RBP22.6■■□□□ 1.21
VPS11-205ENST00000534551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.58■■□□□ 1.21
VPS11-205ENST00000534551 HNRNPUL2Q1KMD3 747 aaKnown RBP22.58■■□□□ 1.21
VPS11-205ENST00000534551 CFAP43Q8NDM7 1665 aa22.57■■□□□ 1.2
VPS11-205ENST00000534551 ABCA9Q8IUA7 1624 aa22.54■■□□□ 1.2
VPS11-205ENST00000534551 KIF14Q15058 1648 aa22.53■■□□□ 1.2
VPS11-205ENST00000534551 KCNH8Q96L42 1107 aa22.53■■□□□ 1.2
VPS11-205ENST00000534551 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.2
VPS11-205ENST00000534551 TTC37Q6PGP7 1564 aa22.52■■□□□ 1.2
VPS11-205ENST00000534551 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
VPS11-205ENST00000534551 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
VPS11-205ENST00000534551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.47■■□□□ 1.19
VPS11-205ENST00000534551 TROQ12816 1431 aaPredicted RBP22.42■■□□□ 1.18
VPS11-205ENST00000534551 CD109Q6YHK3 1445 aa22.42■■□□□ 1.18
VPS11-205ENST00000534551 KDM6BO15054 1643 aa22.42■■□□□ 1.18
VPS11-205ENST00000534551 PLEKHD1A6NEE1 506 aa22.41■■□□□ 1.18
VPS11-205ENST00000534551 MYO5CQ9NQX4 1742 aa22.4■■□□□ 1.18
VPS11-205ENST00000534551 TIAM1Q13009 1591 aa22.38■■□□□ 1.17
VPS11-205ENST00000534551 TEX14Q8IWB6 1497 aa22.37■■□□□ 1.17
VPS11-205ENST00000534551 CDC42BPAQ5VT25 1732 aa22.34■■□□□ 1.17
VPS11-205ENST00000534551 EHBP1L1Q8N3D4 1523 aa22.34■■□□□ 1.17
VPS11-205ENST00000534551 CDC42BPBQ9Y5S2 1711 aa22.32■■□□□ 1.16
VPS11-205ENST00000534551 COL17A1Q9UMD9 1497 aaPredicted RBP22.32■■□□□ 1.16
VPS11-205ENST00000534551 PREX2Q70Z35 1606 aa22.31■■□□□ 1.16
VPS11-205ENST00000534551 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
VPS11-205ENST00000534551 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
VPS11-205ENST00000534551 MTUS2Q5JR59 1369 aa22.26■■□□□ 1.15
VPS11-205ENST00000534551 FANCAO15360 1455 aa22.26■■□□□ 1.15
VPS11-205ENST00000534551 FRMPD1Q5SYB0 1578 aa22.25■■□□□ 1.15
VPS11-205ENST00000534551 SUPT6HQ7KZ85 1726 aaKnown RBP22.24■■□□□ 1.15
VPS11-205ENST00000534551 ARHGAP5Q13017 1502 aa22.24■■□□□ 1.15
VPS11-205ENST00000534551 NEO1Q92859 1461 aa22.23■■□□□ 1.15
VPS11-205ENST00000534551 PLCH2O75038 1416 aa22.22■■□□□ 1.15
VPS11-205ENST00000534551 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
VPS11-205ENST00000534551 ARAP3Q8WWN8 1544 aa22.21■■□□□ 1.15
VPS11-205ENST00000534551 RICTORQ6R327 1708 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms