RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 RUSC2Q8N2Y8 1516 aa30.97■■■□□ 2.55
RECQL4-207ENST00000534538 KIAA0586Q9BVV6 1533 aa30.9■■■□□ 2.54
RECQL4-207ENST00000534538 CUL7Q14999 1698 aa30.85■■■□□ 2.53
RECQL4-207ENST00000534538 NPM1P06748 294 aaKnown RBP eCLIP30.83■■■□□ 2.53
RECQL4-207ENST00000534538 AEBP2Q6ZN18 517 aaPredicted RBP30.79■■■□□ 2.52
RECQL4-207ENST00000534538 KIF13AQ9H1H9 1805 aa30.78■■■□□ 2.52
RECQL4-207ENST00000534538 CARMIL1Q5VZK9 1371 aa30.78■■■□□ 2.52
RECQL4-207ENST00000534538 FAM69CQ0P6D2 419 aa30.73■■■□□ 2.51
RECQL4-207ENST00000534538 ABCC10Q5T3U5 1492 aa30.73■■■□□ 2.51
RECQL4-207ENST00000534538 MAPKBP1O60336 1514 aa30.73■■■□□ 2.51
RECQL4-207ENST00000534538 ADCY10Q96PN6 1610 aa30.7■■■□□ 2.51
RECQL4-207ENST00000534538 PTPRGP23470 1445 aa30.64■■■□□ 2.49
RECQL4-207ENST00000534538 CARMIL2Q6F5E8 1435 aa30.6■■■□□ 2.49
RECQL4-207ENST00000534538 DIP2BQ9P265 1576 aa30.58■■■□□ 2.49
RECQL4-207ENST00000534538 TNIKQ9UKE5 1360 aa30.58■■■□□ 2.49
RECQL4-207ENST00000534538 IQGAP2Q13576 1575 aa30.53■■■□□ 2.48
RECQL4-207ENST00000534538 TTBK1Q5TCY1 1321 aaPredicted RBP30.48■■■□□ 2.47
RECQL4-207ENST00000534538 RAPGEF2Q9Y4G8 1499 aa30.47■■■□□ 2.47
RECQL4-207ENST00000534538 ABCC2Q92887 1545 aa30.47■■■□□ 2.47
RECQL4-207ENST00000534538 UHRF1BP1LA0JNW5 1464 aa30.43■■■□□ 2.46
RECQL4-207ENST00000534538 DISP1Q96F81 1524 aa30.42■■■□□ 2.46
RECQL4-207ENST00000534538 UACAQ9BZF9 1416 aa30.39■■■□□ 2.46
RECQL4-207ENST00000534538 PLB1Q6P1J6 1458 aa30.38■■■□□ 2.45
RECQL4-207ENST00000534538 UGGT2Q9NYU1 1516 aa30.37■■■□□ 2.45
RECQL4-207ENST00000534538 ASXL2Q76L83 1435 aa30.36■■■□□ 2.45
RECQL4-207ENST00000534538 KDM6BO15054 1643 aa30.33■■■□□ 2.45
RECQL4-207ENST00000534538 TSPOAP1O95153 1857 aa30.32■■■□□ 2.44
RECQL4-207ENST00000534538 GLI2P10070 1586 aa30.29■■■□□ 2.44
RECQL4-207ENST00000534538 KDM5BQ9UGL1 1544 aa30.27■■■□□ 2.44
RECQL4-207ENST00000534538 KIAA0556O60303 1618 aa30.24■■■□□ 2.43
RECQL4-207ENST00000534538 EPRSP07814 1512 aaKnown RBP30.17■■■□□ 2.42
RECQL4-207ENST00000534538 PPRC1Q5VV67 1664 aaKnown RBP30.15■■■□□ 2.42
RECQL4-207ENST00000534538 PRXQ9BXM0 1461 aa30.15■■■□□ 2.42
RECQL4-207ENST00000534538 KDM4FA0A1W2PPD8 638 aa30.15■■■□□ 2.42
RECQL4-207ENST00000534538 GOLGA3Q08378 1498 aa30.14■■■□□ 2.42
RECQL4-207ENST00000534538 ZCCHC11Q5TAX3 1644 aaKnown RBP30.13■■■□□ 2.41
RECQL4-207ENST00000534538 CTTNBP2Q8WZ74 1663 aa30.12■■■□□ 2.41
RECQL4-207ENST00000534538 MAP3K4Q9Y6R4 1608 aa30.07■■■□□ 2.4
RECQL4-207ENST00000534538 TEX14Q8IWB6 1497 aa30.05■■■□□ 2.4
RECQL4-207ENST00000534538 WDR7Q9Y4E6 1490 aa30.04■■■□□ 2.4
RECQL4-207ENST00000534538 COL17A1Q9UMD9 1497 aaPredicted RBP30.02■■■□□ 2.4
RECQL4-207ENST00000534538 ABCA8O94911 1581 aa30.01■■■□□ 2.39
RECQL4-207ENST00000534538 FAM9AQ8IZU1 332 aaPredicted RBP29.94■■■□□ 2.38
RECQL4-207ENST00000534538 CSRNP3Q8WYN3 585 aa29.93■■■□□ 2.38
RECQL4-207ENST00000534538 KCNH8Q96L42 1107 aa29.91■■■□□ 2.38
RECQL4-207ENST00000534538 CD109Q6YHK3 1445 aa29.9■■■□□ 2.38
RECQL4-207ENST00000534538 MAGI3Q5TCQ9 1506 aa29.88■■■□□ 2.37
RECQL4-207ENST00000534538 P3H3Q8IVL6 736 aa29.84■■■□□ 2.37
RECQL4-207ENST00000534538 CFAP43Q8NDM7 1665 aa29.83■■■□□ 2.37
RECQL4-207ENST00000534538 ADGRL1O94910 1474 aa29.83■■■□□ 2.37
RECQL4-207ENST00000534538 ATP10BO94823 1461 aa29.79■■■□□ 2.36
RECQL4-207ENST00000534538 EEA1Q15075 1411 aa29.77■■■□□ 2.36
RECQL4-207ENST00000534538 SAMD9Q5K651 1589 aa29.74■■■□□ 2.35
RECQL4-207ENST00000534538 ARID3CA6NKF2 412 aa29.72■■■□□ 2.35
RECQL4-207ENST00000534538 ARAP3Q8WWN8 1544 aa29.66■■■□□ 2.34
RECQL4-207ENST00000534538 PHLDB1Q86UU1 1377 aa29.65■■■□□ 2.34
RECQL4-207ENST00000534538 RAPGEF6Q8TEU7 1601 aa29.64■■■□□ 2.34
RECQL4-207ENST00000534538 ABCA9Q8IUA7 1624 aa29.62■■■□□ 2.33
RECQL4-207ENST00000534538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.59■■■□□ 2.33
RECQL4-207ENST00000534538 HNRNPUL2Q1KMD3 747 aaKnown RBP29.59■■■□□ 2.33
RECQL4-207ENST00000534538 NUP153P49790 1475 aaKnown RBP29.57■■■□□ 2.32
RECQL4-207ENST00000534538 RANGAP1P46060 587 aaPredicted RBP29.56■■■□□ 2.32
RECQL4-207ENST00000534538 FHOD3Q2V2M9 1422 aa29.54■■■□□ 2.32
RECQL4-207ENST00000534538 NEO1Q92859 1461 aa29.52■■■□□ 2.32
RECQL4-207ENST00000534538 PLEKHD1A6NEE1 506 aa29.49■■■□□ 2.31
RECQL4-207ENST00000534538 KIF21BO75037 1637 aa29.47■■■□□ 2.31
RECQL4-207ENST00000534538 RAPGEF3O95398 923 aa29.47■■■□□ 2.31
RECQL4-207ENST00000534538 EFCAB5A4FU69 1503 aa29.45■■■□□ 2.31
RECQL4-207ENST00000534538 HECW2Q9P2P5 1572 aa29.42■■■□□ 2.3
RECQL4-207ENST00000534538 FRMPD1Q5SYB0 1578 aa29.31■■■□□ 2.28
RECQL4-207ENST00000534538 AKNAQ7Z591 1439 aa29.31■■■□□ 2.28
RECQL4-207ENST00000534538 UBTFP17480 764 aaKnown RBP29.31■■■□□ 2.28
RECQL4-207ENST00000534538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.3■■■□□ 2.28
RECQL4-207ENST00000534538 DENND4BO75064 1496 aaPredicted RBP29.29■■■□□ 2.28
RECQL4-207ENST00000534538 ILDR1Q86SU0 546 aaPredicted RBP29.29■■■□□ 2.28
RECQL4-207ENST00000534538 ADAMTSL3P82987 1691 aa29.28■■■□□ 2.28
RECQL4-207ENST00000534538 CHIC1Q5VXU3 224 aa29.28■■■□□ 2.28
RECQL4-207ENST00000534538 FANCAO15360 1455 aa29.28■■■□□ 2.28
RECQL4-207ENST00000534538 PTPRMP28827 1452 aa29.24■■■□□ 2.27
RECQL4-207ENST00000534538 ARID4BQ4LE39 1312 aaPredicted RBP29.23■■■□□ 2.27
RECQL4-207ENST00000534538 CFAP74Q9C0B2 1584 aa29.23■■■□□ 2.27
RECQL4-207ENST00000534538 FMN1Q68DA7 1419 aa29.23■■■□□ 2.27
RECQL4-207ENST00000534538 CDK13Q14004 1512 aaKnown RBP29.22■■■□□ 2.27
RECQL4-207ENST00000534538 TTC37Q6PGP7 1564 aa29.21■■■□□ 2.27
RECQL4-207ENST00000534538 RICTORQ6R327 1708 aa29.2■■■□□ 2.27
RECQL4-207ENST00000534538 EHMT2Q96KQ7 1210 aa29.2■■■□□ 2.26
RECQL4-207ENST00000534538 BCORL1Q5H9F3 1711 aa29.19■■■□□ 2.26
RECQL4-207ENST00000534538 ARHGAP35Q9NRY4 1499 aa29.18■■■□□ 2.26
RECQL4-207ENST00000534538 PLCH2O75038 1416 aa29.18■■■□□ 2.26
RECQL4-207ENST00000534538 ARHGEF40Q8TER5 1519 aa29.17■■■□□ 2.26
RECQL4-207ENST00000534538 ATP1B4Q9UN42 357 aaPredicted RBP29.16■■■□□ 2.26
RECQL4-207ENST00000534538 CDK11AQ9UQ88 783 aaPredicted RBP29.16■■■□□ 2.26
RECQL4-207ENST00000534538 ZMYM4Q5VZL5 1548 aa29.14■■■□□ 2.25
RECQL4-207ENST00000534538 MAGI2Q86UL8 1455 aa29.12■■■□□ 2.25
RECQL4-207ENST00000534538 HECW1Q76N89 1606 aa29.12■■■□□ 2.25
RECQL4-207ENST00000534538 MADDQ8WXG6 1647 aa29.1■■■□□ 2.25
RECQL4-207ENST00000534538 SCAPERQ9BY12 1400 aa29.1■■■□□ 2.25
RECQL4-207ENST00000534538 EFCAB2Q5VUJ9 269 aa29.09■■■□□ 2.25
RECQL4-207ENST00000534538 POGZQ7Z3K3 1410 aa29.08■■■□□ 2.25
RECQL4-207ENST00000534538 ZFYVE16Q7Z3T8 1539 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms