RNA–Protein interactions for RNA: ENST00000534495.1

LMNB2-206, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-206ENST00000534495 JPH4Q96JJ6 628 aa36.49■■■■□ 3.43
LMNB2-206ENST00000534495 PRG4Q92954 1404 aaPredicted RBP36.45■■■■□ 3.43
LMNB2-206ENST00000534495 KIAA0586Q9BVV6 1533 aa36.44■■■■□ 3.42
LMNB2-206ENST00000534495 RAPGEF2Q9Y4G8 1499 aa36.26■■■■□ 3.4
LMNB2-206ENST00000534495 TRHP20396 242 aaPredicted RBP36.25■■■■□ 3.39
LMNB2-206ENST00000534495 IQGAP2Q13576 1575 aa36.18■■■■□ 3.38
LMNB2-206ENST00000534495 PRXQ9BXM0 1461 aa36.07■■■■□ 3.37
LMNB2-206ENST00000534495 CARMIL2Q6F5E8 1435 aa36.03■■■■□ 3.36
LMNB2-206ENST00000534495 ADCY10Q96PN6 1610 aa36■■■■□ 3.35
LMNB2-206ENST00000534495 CTTNBP2Q8WZ74 1663 aa36■■■■□ 3.35
LMNB2-206ENST00000534495 UGGT2Q9NYU1 1516 aa35.98■■■■□ 3.35
LMNB2-206ENST00000534495 DISP1Q96F81 1524 aa35.97■■■■□ 3.35
LMNB2-206ENST00000534495 PTPRGP23470 1445 aa35.96■■■■□ 3.35
LMNB2-206ENST00000534495 TNIKQ9UKE5 1360 aa35.95■■■■□ 3.35
LMNB2-206ENST00000534495 CSRNP3Q8WYN3 585 aa35.91■■■■□ 3.34
LMNB2-206ENST00000534495 EEA1Q15075 1411 aa35.89■■■■□ 3.34
LMNB2-206ENST00000534495 NPM1P06748 294 aaKnown RBP eCLIP35.86■■■■□ 3.33
LMNB2-206ENST00000534495 KIAA0556O60303 1618 aa35.85■■■■□ 3.33
LMNB2-206ENST00000534495 KIF13AQ9H1H9 1805 aa35.83■■■■□ 3.33
LMNB2-206ENST00000534495 MAPKBP1O60336 1514 aa35.83■■■■□ 3.33
LMNB2-206ENST00000534495 TTBK1Q5TCY1 1321 aaPredicted RBP35.83■■■■□ 3.33
LMNB2-206ENST00000534495 CHIC1Q5VXU3 224 aa35.8■■■■□ 3.32
LMNB2-206ENST00000534495 UHRF1BP1LA0JNW5 1464 aa35.73■■■■□ 3.31
LMNB2-206ENST00000534495 UACAQ9BZF9 1416 aa35.72■■■■□ 3.31
LMNB2-206ENST00000534495 GOLGA3Q08378 1498 aa35.72■■■■□ 3.31
LMNB2-206ENST00000534495 ABCC2Q92887 1545 aa35.71■■■■□ 3.31
LMNB2-206ENST00000534495 ABCC10Q5T3U5 1492 aa35.7■■■■□ 3.31
LMNB2-206ENST00000534495 FAM9AQ8IZU1 332 aaPredicted RBP35.67■■■■□ 3.3
LMNB2-206ENST00000534495 DIP2BQ9P265 1576 aa35.64■■■■□ 3.3
LMNB2-206ENST00000534495 FAM69CQ0P6D2 419 aa35.61■■■■□ 3.29
LMNB2-206ENST00000534495 KIF21BO75037 1637 aa35.58■■■■□ 3.29
LMNB2-206ENST00000534495 KDM5BQ9UGL1 1544 aa35.56■■■■□ 3.28
LMNB2-206ENST00000534495 PLB1Q6P1J6 1458 aa35.52■■■■□ 3.28
LMNB2-206ENST00000534495 ASXL2Q76L83 1435 aa35.51■■■■□ 3.28
LMNB2-206ENST00000534495 SAMD9Q5K651 1589 aa35.5■■■■□ 3.27
LMNB2-206ENST00000534495 ZCCHC11Q5TAX3 1644 aaKnown RBP35.5■■■■□ 3.27
LMNB2-206ENST00000534495 ABCA8O94911 1581 aa35.49■■■■□ 3.27
LMNB2-206ENST00000534495 P3H3Q8IVL6 736 aa35.42■■■■□ 3.26
LMNB2-206ENST00000534495 TSPOAP1O95153 1857 aa35.4■■■■□ 3.26
LMNB2-206ENST00000534495 GLI2P10070 1586 aa35.38■■■■□ 3.25
LMNB2-206ENST00000534495 EPRSP07814 1512 aaKnown RBP35.32■■■■□ 3.24
LMNB2-206ENST00000534495 RANGAP1P46060 587 aaPredicted RBP35.29■■■■□ 3.24
LMNB2-206ENST00000534495 WDR7Q9Y4E6 1490 aa35.27■■■■□ 3.24
LMNB2-206ENST00000534495 PPRC1Q5VV67 1664 aaKnown RBP35.24■■■■□ 3.23
LMNB2-206ENST00000534495 EFCAB5A4FU69 1503 aa35.24■■■■□ 3.23
LMNB2-206ENST00000534495 RAPGEF6Q8TEU7 1601 aa35.23■■■■□ 3.23
LMNB2-206ENST00000534495 FHOD3Q2V2M9 1422 aa35.23■■■■□ 3.23
LMNB2-206ENST00000534495 UBTFP17480 764 aaKnown RBP35.22■■■■□ 3.23
LMNB2-206ENST00000534495 EHMT2Q96KQ7 1210 aa35.22■■■■□ 3.23
LMNB2-206ENST00000534495 MAP3K4Q9Y6R4 1608 aa35.21■■■■□ 3.23
LMNB2-206ENST00000534495 ATP10BO94823 1461 aa35.18■■■■□ 3.22
LMNB2-206ENST00000534495 KDM6BO15054 1643 aa35.17■■■■□ 3.22
LMNB2-206ENST00000534495 ARID3CA6NKF2 412 aa35.12■■■■□ 3.21
LMNB2-206ENST00000534495 NUP153P49790 1475 aaKnown RBP35.09■■■■□ 3.21
LMNB2-206ENST00000534495 KCNH8Q96L42 1107 aa35.07■■■■□ 3.2
LMNB2-206ENST00000534495 CFAP43Q8NDM7 1665 aa35.05■■■■□ 3.2
LMNB2-206ENST00000534495 TEX14Q8IWB6 1497 aa35.03■■■■□ 3.2
LMNB2-206ENST00000534495 ARHGAP35Q9NRY4 1499 aa35.01■■■■□ 3.19
LMNB2-206ENST00000534495 CD109Q6YHK3 1445 aa34.98■■■■□ 3.19
LMNB2-206ENST00000534495 MAGI3Q5TCQ9 1506 aa34.96■■■■□ 3.19
LMNB2-206ENST00000534495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.94■■■■□ 3.18
LMNB2-206ENST00000534495 HNRNPUL2Q1KMD3 747 aaKnown RBP34.94■■■■□ 3.18
LMNB2-206ENST00000534495 COL17A1Q9UMD9 1497 aaPredicted RBP34.91■■■■□ 3.18
LMNB2-206ENST00000534495 FMN1Q68DA7 1419 aa34.9■■■■□ 3.18
LMNB2-206ENST00000534495 ABCA9Q8IUA7 1624 aa34.9■■■■□ 3.18
LMNB2-206ENST00000534495 PLEKHD1A6NEE1 506 aa34.81■■■■□ 3.16
LMNB2-206ENST00000534495 HECW1Q76N89 1606 aa34.8■■■■□ 3.16
LMNB2-206ENST00000534495 CDK13Q14004 1512 aaKnown RBP34.79■■■■□ 3.16
LMNB2-206ENST00000534495 ATP1B4Q9UN42 357 aaPredicted RBP34.7■■■■□ 3.15
LMNB2-206ENST00000534495 AEBP2Q6ZN18 517 aaPredicted RBP34.69■■■■□ 3.14
LMNB2-206ENST00000534495 LRRIQ1Q96JM4 1722 aa34.67■■■■□ 3.14
LMNB2-206ENST00000534495 ARAP3Q8WWN8 1544 aa34.67■■■■□ 3.14
LMNB2-206ENST00000534495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.65■■■■□ 3.14
LMNB2-206ENST00000534495 CLIP1P30622 1438 aa34.65■■■■□ 3.14
LMNB2-206ENST00000534495 PHLDB1Q86UU1 1377 aa34.65■■■■□ 3.14
LMNB2-206ENST00000534495 NEO1Q92859 1461 aa34.63■■■■□ 3.13
LMNB2-206ENST00000534495 TTC37Q6PGP7 1564 aa34.62■■■■□ 3.13
LMNB2-206ENST00000534495 PCF11O94913 1555 aaKnown RBP34.61■■■■□ 3.13
LMNB2-206ENST00000534495 CASKIN1Q8WXD9 1431 aa34.6■■■■□ 3.13
LMNB2-206ENST00000534495 CDK11AQ9UQ88 783 aaPredicted RBP34.57■■■■□ 3.12
LMNB2-206ENST00000534495 KDM4FA0A1W2PPD8 638 aa34.53■■■■□ 3.12
LMNB2-206ENST00000534495 TROQ12816 1431 aaPredicted RBP34.5■■■■□ 3.11
LMNB2-206ENST00000534495 CCDC18Q5T9S5 1454 aa34.5■■■■□ 3.11
LMNB2-206ENST00000534495 FYCO1Q9BQS8 1478 aa34.5■■■■□ 3.11
LMNB2-206ENST00000534495 CFAP74Q9C0B2 1584 aa34.49■■■■□ 3.11
LMNB2-206ENST00000534495 FANCAO15360 1455 aa34.48■■■■□ 3.11
LMNB2-206ENST00000534495 KIF14Q15058 1648 aa34.47■■■■□ 3.11
LMNB2-206ENST00000534495 RAPGEF3O95398 923 aa34.45■■■■□ 3.11
LMNB2-206ENST00000534495 AKNAQ7Z591 1439 aa34.45■■■■□ 3.11
LMNB2-206ENST00000534495 PLCH2O75038 1416 aa34.44■■■■□ 3.1
LMNB2-206ENST00000534495 FRMPD1Q5SYB0 1578 aa34.44■■■■□ 3.1
LMNB2-206ENST00000534495 MYO5CQ9NQX4 1742 aa34.43■■■■□ 3.1
LMNB2-206ENST00000534495 CEP162Q5TB80 1403 aa34.41■■■■□ 3.1
LMNB2-206ENST00000534495 ADGRL1O94910 1474 aa34.4■■■■□ 3.1
LMNB2-206ENST00000534495 RICTORQ6R327 1708 aa34.38■■■■□ 3.09
LMNB2-206ENST00000534495 DENND4BO75064 1496 aaPredicted RBP34.37■■■■□ 3.09
LMNB2-206ENST00000534495 LOC105371045A0A1W2PR82 267 aa34.33■■■■□ 3.09
LMNB2-206ENST00000534495 EFCAB2Q5VUJ9 269 aa34.28■■■■□ 3.08
LMNB2-206ENST00000534495 CDC42BPBQ9Y5S2 1711 aa34.26■■■■□ 3.07
LMNB2-206ENST00000534495 SCAPERQ9BY12 1400 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms