RNA–Protein interactions for RNA: ENST00000534391.1

CHRNB3-203, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

TSL 3

Gene CHRNB3, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-203ENST00000534391 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
CHRNB3-203ENST00000534391 MIER1Q8N108 512 aa12.2□□□□□ -0.46
CHRNB3-203ENST00000534391 PLCD3Q8N3E9 789 aa12.2□□□□□ -0.46
CHRNB3-203ENST00000534391 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
CHRNB3-203ENST00000534391 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
CHRNB3-203ENST00000534391 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
CHRNB3-203ENST00000534391 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
CHRNB3-203ENST00000534391 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
CHRNB3-203ENST00000534391 BAZ1BQ9UIG0 1483 aaKnown RBP12.1□□□□□ -0.47
CHRNB3-203ENST00000534391 POTEHQ6S545 545 aa12.09□□□□□ -0.47
CHRNB3-203ENST00000534391 KIF21AQ7Z4S6 1674 aa12.08□□□□□ -0.48
CHRNB3-203ENST00000534391 PDS5BQ9NTI5 1447 aa12.07□□□□□ -0.48
CHRNB3-203ENST00000534391 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
CHRNB3-203ENST00000534391 KLHL34Q8N239 644 aa12.05□□□□□ -0.48
CHRNB3-203ENST00000534391 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
CHRNB3-203ENST00000534391 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
CHRNB3-203ENST00000534391 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHRNB3-203ENST00000534391 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
CHRNB3-203ENST00000534391 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
CHRNB3-203ENST00000534391 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
CHRNB3-203ENST00000534391 MRC2Q9UBG0 1479 aa11.98□□□□□ -0.49
CHRNB3-203ENST00000534391 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
CHRNB3-203ENST00000534391 WDR62O43379 1518 aa11.96□□□□□ -0.49
CHRNB3-203ENST00000534391 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
CHRNB3-203ENST00000534391 SPOCK2Q92563 424 aa11.91□□□□□ -0.5
CHRNB3-203ENST00000534391 HAX1O00165 279 aa11.89□□□□□ -0.51
CHRNB3-203ENST00000534391 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
CHRNB3-203ENST00000534391 CD44P16070 742 aaKnown RBP11.86□□□□□ -0.51
CHRNB3-203ENST00000534391 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
CHRNB3-203ENST00000534391 NUBP1P53384 320 aa11.85□□□□□ -0.51
CHRNB3-203ENST00000534391 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
CHRNB3-203ENST00000534391 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
CHRNB3-203ENST00000534391 FAM212AQ96EL1 285 aa11.83□□□□□ -0.52
CHRNB3-203ENST00000534391 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
CHRNB3-203ENST00000534391 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
CHRNB3-203ENST00000534391 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
CHRNB3-203ENST00000534391 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
CHRNB3-203ENST00000534391 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
CHRNB3-203ENST00000534391 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
CHRNB3-203ENST00000534391 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
CHRNB3-203ENST00000534391 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.52
CHRNB3-203ENST00000534391 CIZ1Q9ULV3 898 aaPredicted RBP11.76□□□□□ -0.53
CHRNB3-203ENST00000534391 CFTRP13569 1480 aa11.76□□□□□ -0.53
CHRNB3-203ENST00000534391 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
CHRNB3-203ENST00000534391 GSE1Q14687 1217 aa11.75□□□□□ -0.53
CHRNB3-203ENST00000534391 WIZO95785 1651 aa11.75□□□□□ -0.53
CHRNB3-203ENST00000534391 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
CHRNB3-203ENST00000534391 EVX2Q03828 476 aa11.71□□□□□ -0.53
CHRNB3-203ENST00000534391 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
CHRNB3-203ENST00000534391 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
CHRNB3-203ENST00000534391 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
CHRNB3-203ENST00000534391 PHF12Q96QT6 1004 aa11.66□□□□□ -0.54
CHRNB3-203ENST00000534391 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
CHRNB3-203ENST00000534391 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
CHRNB3-203ENST00000534391 PYGBP11216 843 aa11.62□□□□□ -0.55
CHRNB3-203ENST00000534391 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
CHRNB3-203ENST00000534391 AMER1Q5JTC6 1135 aaPredicted RBP11.6□□□□□ -0.55
CHRNB3-203ENST00000534391 ECM2O94769 699 aaPredicted RBP11.57□□□□□ -0.56
CHRNB3-203ENST00000534391 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
CHRNB3-203ENST00000534391 TOPBP1Q92547 1522 aa11.56□□□□□ -0.56
CHRNB3-203ENST00000534391 CLCN6P51797 869 aa11.56□□□□□ -0.56
CHRNB3-203ENST00000534391 PKD2Q13563 968 aa11.56□□□□□ -0.56
CHRNB3-203ENST00000534391 RSF1Q96T23 1441 aaPredicted RBP11.56□□□□□ -0.56
CHRNB3-203ENST00000534391 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
CHRNB3-203ENST00000534391 EIF4G3O43432 1585 aaKnown RBP11.55□□□□□ -0.56
CHRNB3-203ENST00000534391 MAP3K13O43283 966 aa11.55□□□□□ -0.56
CHRNB3-203ENST00000534391 AQRO60306 1485 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHRNB3-203ENST00000534391 CHRM1P11229 460 aaPredicted RBP11.54□□□□□ -0.56
CHRNB3-203ENST00000534391 PCDHB13Q9Y5F0 798 aa11.54□□□□□ -0.56
CHRNB3-203ENST00000534391 GABBR2O75899 941 aa11.53□□□□□ -0.56
CHRNB3-203ENST00000534391 CHD1O14646 1710 aa11.52□□□□□ -0.56
CHRNB3-203ENST00000534391 MS4A3Q96HJ5 214 aa11.52□□□□□ -0.57
CHRNB3-203ENST00000534391 RTN4Q9NQC3 1192 aaKnown RBP11.52□□□□□ -0.57
CHRNB3-203ENST00000534391 SGIP1Q9BQI5 828 aa11.51□□□□□ -0.57
CHRNB3-203ENST00000534391 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
CHRNB3-203ENST00000534391 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
CHRNB3-203ENST00000534391 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
CHRNB3-203ENST00000534391 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
CHRNB3-203ENST00000534391 CCDC88BA6NC98 1476 aa11.48□□□□□ -0.57
CHRNB3-203ENST00000534391 TARBP1Q13395 1621 aaKnown RBP11.48□□□□□ -0.57
CHRNB3-203ENST00000534391 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
CHRNB3-203ENST00000534391 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
CHRNB3-203ENST00000534391 PCDHB8Q9UN66 801 aa11.45□□□□□ -0.58
CHRNB3-203ENST00000534391 RIOK3O14730 519 aaKnown RBP11.43□□□□□ -0.58
CHRNB3-203ENST00000534391 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
CHRNB3-203ENST00000534391 CLASP1Q7Z460 1538 aa11.42□□□□□ -0.58
CHRNB3-203ENST00000534391 RGL2O15211 777 aa11.42□□□□□ -0.58
CHRNB3-203ENST00000534391 RNF25Q96BH1 459 aaPredicted RBP11.42□□□□□ -0.58
CHRNB3-203ENST00000534391 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
CHRNB3-203ENST00000534391 RAD54L2Q9Y4B4 1467 aa11.41□□□□□ -0.58
CHRNB3-203ENST00000534391 DCBLD2Q96PD2 775 aa11.4□□□□□ -0.58
CHRNB3-203ENST00000534391 TAOK2Q9UL54 1235 aa11.39□□□□□ -0.59
CHRNB3-203ENST00000534391 CHMP7Q8WUX9 453 aaPredicted RBP11.38□□□□□ -0.59
CHRNB3-203ENST00000534391 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
CHRNB3-203ENST00000534391 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
CHRNB3-203ENST00000534391 SOGA1O94964 1423 aa11.37□□□□□ -0.59
CHRNB3-203ENST00000534391 VGFO15240 615 aaPredicted RBP11.37□□□□□ -0.59
CHRNB3-203ENST00000534391 PDAP1Q13442 181 aaKnown RBP11.37□□□□□ -0.59
CHRNB3-203ENST00000534391 TIE1P35590 1138 aa11.36□□□□□ -0.59
CHRNB3-203ENST00000534391 PSEN1P49768 467 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms