RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	RUSC2	Q8N2Y8	1516 aa		42.25	■■■■■ 4.35
RELA-223	ENST00000534283	KIAA0586	Q9BVV6	1533 aa		42.19	■■■■■ 4.34
RELA-223	ENST00000534283	CARMIL1	Q5VZK9	1371 aa		42.13	■■■■■ 4.33
RELA-223	ENST00000534283	CUL7	Q14999	1698 aa		42.11	■■■■■ 4.33
RELA-223	ENST00000534283	NPM1	P06748	294 aa	Known RBP eCLIP	41.86	■■■■■ 4.29
RELA-223	ENST00000534283	ADCY10	Q96PN6	1610 aa		41.8	■■■■■ 4.28
RELA-223	ENST00000534283	PTPRG	P23470	1445 aa		41.78	■■■■■ 4.28
RELA-223	ENST00000534283	ABCC10	Q5T3U5	1492 aa		41.77	■■■■■ 4.28
RELA-223	ENST00000534283	MAPKBP1	O60336	1514 aa		41.76	■■■■■ 4.28
RELA-223	ENST00000534283	FAM69C	Q0P6D2	419 aa		41.74	■■■■■ 4.27
RELA-223	ENST00000534283	TNIK	Q9UKE5	1360 aa		41.72	■■■■■ 4.27
RELA-223	ENST00000534283	CARMIL2	Q6F5E8	1435 aa		41.71	■■■■■ 4.27
RELA-223	ENST00000534283	RAPGEF2	Q9Y4G8	1499 aa		41.71	■■■■■ 4.27
RELA-223	ENST00000534283	KIF13A	Q9H1H9	1805 aa		41.69	■■■■■ 4.26
RELA-223	ENST00000534283	IQGAP2	Q13576	1575 aa		41.67	■■■■■ 4.26
RELA-223	ENST00000534283	TTBK1	Q5TCY1	1321 aa	Predicted RBP	41.61	■■■■■ 4.25
RELA-223	ENST00000534283	DISP1	Q96F81	1524 aa		41.6	■■■■■ 4.25
RELA-223	ENST00000534283	DIP2B	Q9P265	1576 aa		41.56	■■■■■ 4.24
RELA-223	ENST00000534283	UGGT2	Q9NYU1	1516 aa		41.52	■■■■■ 4.24
RELA-223	ENST00000534283	ABCC2	Q92887	1545 aa		41.49	■■■■■ 4.23
RELA-223	ENST00000534283	UHRF1BP1L	A0JNW5	1464 aa		41.47	■■■■■ 4.23
RELA-223	ENST00000534283	UACA	Q9BZF9	1416 aa		41.45	■■■■■ 4.23
RELA-223	ENST00000534283	AEBP2	Q6ZN18	517 aa	Predicted RBP	41.4	■■■■■ 4.22
RELA-223	ENST00000534283	PRX	Q9BXM0	1461 aa		41.39	■■■■■ 4.22
RELA-223	ENST00000534283	ASXL2	Q76L83	1435 aa		41.35	■■■■■ 4.21
RELA-223	ENST00000534283	PLB1	Q6P1J6	1458 aa		41.32	■■■■■ 4.2
RELA-223	ENST00000534283	KIAA0556	O60303	1618 aa		41.3	■■■■■ 4.2
RELA-223	ENST00000534283	KDM5B	Q9UGL1	1544 aa		41.28	■■■■■ 4.2
RELA-223	ENST00000534283	GLI2	P10070	1586 aa		41.19	■■■■■ 4.18
RELA-223	ENST00000534283	GOLGA3	Q08378	1498 aa		41.15	■■■■■ 4.18
RELA-223	ENST00000534283	CSRNP3	Q8WYN3	585 aa		41.12	■■■■■ 4.17
RELA-223	ENST00000534283	CTTNBP2	Q8WZ74	1663 aa		41.1	■■■■■ 4.17
RELA-223	ENST00000534283	EPRS	P07814	1512 aa	Known RBP	41.1	■■■■■ 4.17
RELA-223	ENST00000534283	KDM6B	O15054	1643 aa		41.1	■■■■■ 4.17
RELA-223	ENST00000534283	TSPOAP1	O95153	1857 aa		41.07	■■■■■ 4.16
RELA-223	ENST00000534283	ZCCHC11	Q5TAX3	1644 aa	Known RBP	41.04	■■■■■ 4.16
RELA-223	ENST00000534283	ABCA8	O94911	1581 aa		40.99	■■■■■ 4.15
RELA-223	ENST00000534283	PPRC1	Q5VV67	1664 aa	Known RBP	40.98	■■■■■ 4.15
RELA-223	ENST00000534283	WDR7	Q9Y4E6	1490 aa		40.95	■■■■■ 4.15
RELA-223	ENST00000534283	COL17A1	Q9UMD9	1497 aa	Predicted RBP	40.9	■■■■■ 4.14
RELA-223	ENST00000534283	MAP3K4	Q9Y6R4	1608 aa		40.89	■■■■■ 4.14
RELA-223	ENST00000534283	EEA1	Q15075	1411 aa		40.88	■■■■■ 4.13
RELA-223	ENST00000534283	KDM4F	A0A1W2PPD8	638 aa		40.88	■■■■■ 4.13
RELA-223	ENST00000534283	P3H3	Q8IVL6	736 aa		40.88	■■■■■ 4.13
RELA-223	ENST00000534283	TEX14	Q8IWB6	1497 aa		40.81	■■■■■ 4.12
RELA-223	ENST00000534283	KCNH8	Q96L42	1107 aa		40.79	■■■■■ 4.12
RELA-223	ENST00000534283	FAM9A	Q8IZU1	332 aa	Predicted RBP	40.74	■■■■■ 4.11
RELA-223	ENST00000534283	ATP10B	O94823	1461 aa		40.72	■■■■■ 4.11
RELA-223	ENST00000534283	CD109	Q6YHK3	1445 aa		40.72	■■■■■ 4.11
RELA-223	ENST00000534283	SAMD9	Q5K651	1589 aa		40.71	■■■■■ 4.11
RELA-223	ENST00000534283	ARID3C	A6NKF2	412 aa		40.69	■■■■■ 4.1
RELA-223	ENST00000534283	MAGI3	Q5TCQ9	1506 aa		40.68	■■■■■ 4.1
RELA-223	ENST00000534283	RANGAP1	P46060	587 aa	Predicted RBP	40.56	■■■■■ 4.08
RELA-223	ENST00000534283	CFAP43	Q8NDM7	1665 aa		40.55	■■■■■ 4.08
RELA-223	ENST00000534283	FHOD3	Q2V2M9	1422 aa		40.51	■■■■■ 4.08
RELA-223	ENST00000534283	CHIC1	Q5VXU3	224 aa		40.51	■■■■■ 4.08
RELA-223	ENST00000534283	NUP153	P49790	1475 aa	Known RBP	40.47	■■■■■ 4.07
RELA-223	ENST00000534283	RAPGEF6	Q8TEU7	1601 aa		40.47	■■■■■ 4.07
RELA-223	ENST00000534283	KIF21B	O75037	1637 aa		40.46	■■■■■ 4.07
RELA-223	ENST00000534283	ADGRL1	O94910	1474 aa		40.44	■■■■■ 4.06
RELA-223	ENST00000534283	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	40.39	■■■■■ 4.06
RELA-223	ENST00000534283	HNRNPUL2	Q1KMD3	747 aa	Known RBP	40.39	■■■■■ 4.06
RELA-223	ENST00000534283	ARAP3	Q8WWN8	1544 aa		40.37	■■■■■ 4.05
RELA-223	ENST00000534283	ABCA9	Q8IUA7	1624 aa		40.34	■■■■■ 4.05
RELA-223	ENST00000534283	EFCAB5	A4FU69	1503 aa		40.33	■■■■■ 4.05
RELA-223	ENST00000534283	PHLDB1	Q86UU1	1377 aa		40.32	■■■■■ 4.04
RELA-223	ENST00000534283	PLEKHD1	A6NEE1	506 aa		40.26	■■■■■ 4.04
RELA-223	ENST00000534283	UBTF	P17480	764 aa	Known RBP	40.25	■■■■■ 4.03
RELA-223	ENST00000534283	EHMT2	Q96KQ7	1210 aa		40.24	■■■■■ 4.03
RELA-223	ENST00000534283	NEO1	Q92859	1461 aa		40.2	■■■■■ 4.03
RELA-223	ENST00000534283	RAPGEF3	O95398	923 aa		40.18	■■■■■ 4.02
RELA-223	ENST00000534283	ARHGAP35	Q9NRY4	1499 aa		40.09	■■■■■ 4.01
RELA-223	ENST00000534283	CDK13	Q14004	1512 aa	Known RBP	40.03	■■■■■ 4
RELA-223	ENST00000534283	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	40.02	■■■■■ 4
RELA-223	ENST00000534283	FMN1	Q68DA7	1419 aa		40.02	■■■■■ 4
RELA-223	ENST00000534283	FRMPD1	Q5SYB0	1578 aa		39.97	■■■■□ 3.99
RELA-223	ENST00000534283	AKNA	Q7Z591	1439 aa		39.97	■■■■□ 3.99
RELA-223	ENST00000534283	FANCA	O15360	1455 aa		39.94	■■■■□ 3.98
RELA-223	ENST00000534283	ATP1B4	Q9UN42	357 aa	Predicted RBP	39.92	■■■■□ 3.98
RELA-223	ENST00000534283	DENND4B	O75064	1496 aa	Predicted RBP	39.92	■■■■□ 3.98
RELA-223	ENST00000534283	TTC37	Q6PGP7	1564 aa		39.9	■■■■□ 3.98
RELA-223	ENST00000534283	PLCH2	O75038	1416 aa		39.85	■■■■□ 3.97
RELA-223	ENST00000534283	HECW1	Q76N89	1606 aa		39.83	■■■■□ 3.97
RELA-223	ENST00000534283	CDK11A	Q9UQ88	783 aa	Predicted RBP	39.82	■■■■□ 3.97
RELA-223	ENST00000534283	HECW2	Q9P2P5	1572 aa		39.79	■■■■□ 3.96
RELA-223	ENST00000534283	CFAP74	Q9C0B2	1584 aa		39.76	■■■■□ 3.96
RELA-223	ENST00000534283	RICTOR	Q6R327	1708 aa		39.74	■■■■□ 3.95
RELA-223	ENST00000534283	ADAMTSL3	P82987	1691 aa		39.74	■■■■□ 3.95
RELA-223	ENST00000534283	ARID4B	Q4LE39	1312 aa	Predicted RBP	39.73	■■■■□ 3.95
RELA-223	ENST00000534283	TRO	Q12816	1431 aa	Predicted RBP	39.73	■■■■□ 3.95
RELA-223	ENST00000534283	ARHGEF40	Q8TER5	1519 aa		39.71	■■■■□ 3.95
RELA-223	ENST00000534283	PTPRM	P28827	1452 aa		39.71	■■■■□ 3.95
RELA-223	ENST00000534283	EFCAB2	Q5VUJ9	269 aa		39.71	■■■■□ 3.95
RELA-223	ENST00000534283	SCAPER	Q9BY12	1400 aa		39.71	■■■■□ 3.95
RELA-223	ENST00000534283	ZMYM4	Q5VZL5	1548 aa		39.7	■■■■□ 3.95
RELA-223	ENST00000534283	YEATS2	Q9ULM3	1422 aa		39.66	■■■■□ 3.94
RELA-223	ENST00000534283	POGZ	Q7Z3K3	1410 aa		39.65	■■■■□ 3.94
RELA-223	ENST00000534283	CASKIN1	Q8WXD9	1431 aa		39.65	■■■■□ 3.94
RELA-223	ENST00000534283	MAGI2	Q86UL8	1455 aa		39.65	■■■■□ 3.94
RELA-223	ENST00000534283	BCORL1	Q5H9F3	1711 aa		39.62	■■■■□ 3.93

Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms