RNA–Protein interactions for RNA: ENST00000534230.5

SC5D-208, Transcript of sterol-C5-desaturase, humanhuman

TSL 5 BASIC

Gene SC5D, Length 1,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-208ENST00000534230 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
SC5D-208ENST00000534230 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.88
SC5D-208ENST00000534230 JPH4Q96JJ6 628 aa20.51■□□□□ 0.87
SC5D-208ENST00000534230 KIAA0586Q9BVV6 1533 aa20.5■□□□□ 0.87
SC5D-208ENST00000534230 FAM9AQ8IZU1 332 aaPredicted RBP20.48■□□□□ 0.87
SC5D-208ENST00000534230 PRG4Q92954 1404 aaPredicted RBP20.47■□□□□ 0.87
SC5D-208ENST00000534230 PRXQ9BXM0 1461 aa20.45■□□□□ 0.86
SC5D-208ENST00000534230 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
SC5D-208ENST00000534230 EEA1Q15075 1411 aa20.4■□□□□ 0.86
SC5D-208ENST00000534230 IQGAP2Q13576 1575 aa20.4■□□□□ 0.86
SC5D-208ENST00000534230 CTTNBP2Q8WZ74 1663 aa20.34■□□□□ 0.85
SC5D-208ENST00000534230 TTBK1Q5TCY1 1321 aaPredicted RBP20.3■□□□□ 0.84
SC5D-208ENST00000534230 DISP1Q96F81 1524 aa20.27■□□□□ 0.84
SC5D-208ENST00000534230 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
SC5D-208ENST00000534230 UGGT2Q9NYU1 1516 aa20.27■□□□□ 0.84
SC5D-208ENST00000534230 CARMIL2Q6F5E8 1435 aa20.27■□□□□ 0.83
SC5D-208ENST00000534230 KIF21BO75037 1637 aa20.23■□□□□ 0.83
SC5D-208ENST00000534230 PTPRGP23470 1445 aa20.22■□□□□ 0.83
SC5D-208ENST00000534230 TNIKQ9UKE5 1360 aa20.22■□□□□ 0.83
SC5D-208ENST00000534230 KIAA0556O60303 1618 aa20.21■□□□□ 0.83
SC5D-208ENST00000534230 ADCY10Q96PN6 1610 aa20.17■□□□□ 0.82
SC5D-208ENST00000534230 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
SC5D-208ENST00000534230 RANGAP1P46060 587 aaPredicted RBP20.17■□□□□ 0.82
SC5D-208ENST00000534230 P3H3Q8IVL6 736 aa20.13■□□□□ 0.81
SC5D-208ENST00000534230 GOLGA3Q08378 1498 aa20.13■□□□□ 0.81
SC5D-208ENST00000534230 UBTFP17480 764 aaKnown RBP20.12■□□□□ 0.81
SC5D-208ENST00000534230 NPM1P06748 294 aaKnown RBP eCLIP20.08■□□□□ 0.81
SC5D-208ENST00000534230 UACAQ9BZF9 1416 aa20.08■□□□□ 0.8
SC5D-208ENST00000534230 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
SC5D-208ENST00000534230 PLB1Q6P1J6 1458 aa20.04■□□□□ 0.8
SC5D-208ENST00000534230 ABCC2Q92887 1545 aa20.03■□□□□ 0.8
SC5D-208ENST00000534230 UHRF1BP1LA0JNW5 1464 aa20.03■□□□□ 0.8
SC5D-208ENST00000534230 FHOD3Q2V2M9 1422 aa20■□□□□ 0.79
SC5D-208ENST00000534230 MAPKBP1O60336 1514 aa20■□□□□ 0.79
SC5D-208ENST00000534230 ABCA8O94911 1581 aa19.99■□□□□ 0.79
SC5D-208ENST00000534230 KDM5BQ9UGL1 1544 aa19.96■□□□□ 0.79
SC5D-208ENST00000534230 KIF13AQ9H1H9 1805 aa19.95■□□□□ 0.78
SC5D-208ENST00000534230 EFCAB5A4FU69 1503 aa19.95■□□□□ 0.78
SC5D-208ENST00000534230 ZCCHC11Q5TAX3 1644 aaKnown RBP19.95■□□□□ 0.78
SC5D-208ENST00000534230 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
SC5D-208ENST00000534230 ABCC10Q5T3U5 1492 aa19.92■□□□□ 0.78
SC5D-208ENST00000534230 ASXL2Q76L83 1435 aa19.92■□□□□ 0.78
SC5D-208ENST00000534230 FAM69CQ0P6D2 419 aa19.92■□□□□ 0.78
SC5D-208ENST00000534230 DIP2BQ9P265 1576 aa19.91■□□□□ 0.78
SC5D-208ENST00000534230 ARHGAP35Q9NRY4 1499 aa19.9■□□□□ 0.78
SC5D-208ENST00000534230 RAPGEF6Q8TEU7 1601 aa19.89■□□□□ 0.77
SC5D-208ENST00000534230 ATP10BO94823 1461 aa19.84■□□□□ 0.77
SC5D-208ENST00000534230 NUP153P49790 1475 aaKnown RBP19.83■□□□□ 0.76
SC5D-208ENST00000534230 LOC105371045A0A1W2PR82 267 aa19.82■□□□□ 0.76
SC5D-208ENST00000534230 WDR7Q9Y4E6 1490 aa19.8■□□□□ 0.76
SC5D-208ENST00000534230 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
SC5D-208ENST00000534230 TSPOAP1O95153 1857 aa19.8■□□□□ 0.76
SC5D-208ENST00000534230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
SC5D-208ENST00000534230 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
SC5D-208ENST00000534230 KCNH8Q96L42 1107 aa19.78■□□□□ 0.76
SC5D-208ENST00000534230 CLIP1P30622 1438 aa19.78■□□□□ 0.76
SC5D-208ENST00000534230 FMN1Q68DA7 1419 aa19.77■□□□□ 0.76
SC5D-208ENST00000534230 ATP1B4Q9UN42 357 aaPredicted RBP19.76■□□□□ 0.75
SC5D-208ENST00000534230 GLI2P10070 1586 aa19.76■□□□□ 0.75
SC5D-208ENST00000534230 CDK13Q14004 1512 aaKnown RBP19.72■□□□□ 0.75
SC5D-208ENST00000534230 MAP3K4Q9Y6R4 1608 aa19.7■□□□□ 0.74
SC5D-208ENST00000534230 PPRC1Q5VV67 1664 aaKnown RBP19.7■□□□□ 0.74
SC5D-208ENST00000534230 CEP162Q5TB80 1403 aa19.69■□□□□ 0.74
SC5D-208ENST00000534230 HECW1Q76N89 1606 aa19.69■□□□□ 0.74
SC5D-208ENST00000534230 PCF11O94913 1555 aaKnown RBP19.67■□□□□ 0.74
SC5D-208ENST00000534230 LRRIQ1Q96JM4 1722 aa19.67■□□□□ 0.74
SC5D-208ENST00000534230 PLEKHD1A6NEE1 506 aa19.65■□□□□ 0.74
SC5D-208ENST00000534230 CD109Q6YHK3 1445 aa19.63■□□□□ 0.73
SC5D-208ENST00000534230 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
SC5D-208ENST00000534230 CFAP43Q8NDM7 1665 aa19.63■□□□□ 0.73
SC5D-208ENST00000534230 KDM6BO15054 1643 aa19.59■□□□□ 0.73
SC5D-208ENST00000534230 ABCA9Q8IUA7 1624 aa19.59■□□□□ 0.73
SC5D-208ENST00000534230 FYCO1Q9BQS8 1478 aa19.58■□□□□ 0.72
SC5D-208ENST00000534230 TEX14Q8IWB6 1497 aa19.57■□□□□ 0.72
SC5D-208ENST00000534230 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
SC5D-208ENST00000534230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.54■□□□□ 0.72
SC5D-208ENST00000534230 COL17A1Q9UMD9 1497 aaPredicted RBP19.54■□□□□ 0.72
SC5D-208ENST00000534230 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
SC5D-208ENST00000534230 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
SC5D-208ENST00000534230 TTC37Q6PGP7 1564 aa19.53■□□□□ 0.72
SC5D-208ENST00000534230 KIF14Q15058 1648 aa19.51■□□□□ 0.71
SC5D-208ENST00000534230 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
SC5D-208ENST00000534230 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
SC5D-208ENST00000534230 FANCAO15360 1455 aa19.41■□□□□ 0.7
SC5D-208ENST00000534230 NEO1Q92859 1461 aa19.41■□□□□ 0.7
SC5D-208ENST00000534230 MYO5CQ9NQX4 1742 aa19.4■□□□□ 0.7
SC5D-208ENST00000534230 PLCH2O75038 1416 aa19.4■□□□□ 0.7
SC5D-208ENST00000534230 ARAP3Q8WWN8 1544 aa19.39■□□□□ 0.69
SC5D-208ENST00000534230 AEBP2Q6ZN18 517 aaPredicted RBP19.39■□□□□ 0.69
SC5D-208ENST00000534230 RAPGEF3O95398 923 aa19.37■□□□□ 0.69
SC5D-208ENST00000534230 AKNAQ7Z591 1439 aa19.37■□□□□ 0.69
SC5D-208ENST00000534230 MTUS2Q5JR59 1369 aa19.37■□□□□ 0.69
SC5D-208ENST00000534230 PHLDB1Q86UU1 1377 aa19.36■□□□□ 0.69
SC5D-208ENST00000534230 CFAP74Q9C0B2 1584 aa19.35■□□□□ 0.69
SC5D-208ENST00000534230 TIAM1Q13009 1591 aa19.34■□□□□ 0.69
SC5D-208ENST00000534230 ARHGAP5Q13017 1502 aa19.34■□□□□ 0.69
SC5D-208ENST00000534230 CDC42BPBQ9Y5S2 1711 aa19.34■□□□□ 0.69
SC5D-208ENST00000534230 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.68
SC5D-208ENST00000534230 CDC42BPAQ5VT25 1732 aa19.32■□□□□ 0.68
SC5D-208ENST00000534230 FRMPD1Q5SYB0 1578 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms