RNA–Protein interactions for RNA: ENST00000534018.5

GSDMD-215, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-215ENST00000534018 CUL7Q14999 1698 aa29.14■■■□□ 2.26
GSDMD-215ENST00000534018 KIF27Q86VH2 1401 aa29.07■■■□□ 2.24
GSDMD-215ENST00000534018 AEBP2Q6ZN18 517 aaPredicted RBP29.06■■■□□ 2.24
GSDMD-215ENST00000534018 ADCY10Q96PN6 1610 aa29.05■■■□□ 2.24
GSDMD-215ENST00000534018 IGF1RP08069 1367 aa29.03■■■□□ 2.24
GSDMD-215ENST00000534018 KIAA0586Q9BVV6 1533 aa29.02■■■□□ 2.24
GSDMD-215ENST00000534018 MAPKBP1O60336 1514 aa28.98■■■□□ 2.23
GSDMD-215ENST00000534018 DIP2BQ9P265 1576 aa28.94■■■□□ 2.22
GSDMD-215ENST00000534018 ABCC10Q5T3U5 1492 aa28.93■■■□□ 2.22
GSDMD-215ENST00000534018 NPM1P06748 294 aaKnown RBP eCLIP28.93■■■□□ 2.22
GSDMD-215ENST00000534018 FAM69CQ0P6D2 419 aa28.88■■■□□ 2.21
GSDMD-215ENST00000534018 CARMIL1Q5VZK9 1371 aa28.86■■■□□ 2.21
GSDMD-215ENST00000534018 TSPOAP1O95153 1857 aa28.85■■■□□ 2.21
GSDMD-215ENST00000534018 IQGAP2Q13576 1575 aa28.81■■■□□ 2.2
GSDMD-215ENST00000534018 PTPRGP23470 1445 aa28.77■■■□□ 2.2
GSDMD-215ENST00000534018 TTBK1Q5TCY1 1321 aaPredicted RBP28.76■■■□□ 2.19
GSDMD-215ENST00000534018 KDM6BO15054 1643 aa28.74■■■□□ 2.19
GSDMD-215ENST00000534018 CARMIL2Q6F5E8 1435 aa28.74■■■□□ 2.19
GSDMD-215ENST00000534018 TNIKQ9UKE5 1360 aa28.71■■■□□ 2.19
GSDMD-215ENST00000534018 ABCC2Q92887 1545 aa28.68■■■□□ 2.18
GSDMD-215ENST00000534018 DISP1Q96F81 1524 aa28.64■■■□□ 2.17
GSDMD-215ENST00000534018 RAPGEF2Q9Y4G8 1499 aa28.62■■■□□ 2.17
GSDMD-215ENST00000534018 ASXL2Q76L83 1435 aa28.59■■■□□ 2.17
GSDMD-215ENST00000534018 UHRF1BP1LA0JNW5 1464 aa28.59■■■□□ 2.17
GSDMD-215ENST00000534018 PPRC1Q5VV67 1664 aaKnown RBP28.58■■■□□ 2.17
GSDMD-215ENST00000534018 UGGT2Q9NYU1 1516 aa28.57■■■□□ 2.16
GSDMD-215ENST00000534018 CTTNBP2Q8WZ74 1663 aa28.57■■■□□ 2.16
GSDMD-215ENST00000534018 KIAA0556O60303 1618 aa28.56■■■□□ 2.16
GSDMD-215ENST00000534018 UACAQ9BZF9 1416 aa28.56■■■□□ 2.16
GSDMD-215ENST00000534018 PLB1Q6P1J6 1458 aa28.54■■■□□ 2.16
GSDMD-215ENST00000534018 GLI2P10070 1586 aa28.54■■■□□ 2.16
GSDMD-215ENST00000534018 ZCCHC11Q5TAX3 1644 aaKnown RBP28.52■■■□□ 2.16
GSDMD-215ENST00000534018 KDM5BQ9UGL1 1544 aa28.47■■■□□ 2.15
GSDMD-215ENST00000534018 MAP3K4Q9Y6R4 1608 aa28.45■■■□□ 2.14
GSDMD-215ENST00000534018 EPRSP07814 1512 aaKnown RBP28.42■■■□□ 2.14
GSDMD-215ENST00000534018 KDM4FA0A1W2PPD8 638 aa28.38■■■□□ 2.13
GSDMD-215ENST00000534018 GOLGA3Q08378 1498 aa28.31■■■□□ 2.12
GSDMD-215ENST00000534018 TEX14Q8IWB6 1497 aa28.29■■■□□ 2.12
GSDMD-215ENST00000534018 WDR7Q9Y4E6 1490 aa28.29■■■□□ 2.12
GSDMD-215ENST00000534018 COL17A1Q9UMD9 1497 aaPredicted RBP28.28■■■□□ 2.12
GSDMD-215ENST00000534018 ABCA8O94911 1581 aa28.28■■■□□ 2.12
GSDMD-215ENST00000534018 PRXQ9BXM0 1461 aa28.27■■■□□ 2.12
GSDMD-215ENST00000534018 CFAP43Q8NDM7 1665 aa28.23■■■□□ 2.11
GSDMD-215ENST00000534018 ADGRL1O94910 1474 aa28.21■■■□□ 2.11
GSDMD-215ENST00000534018 CD109Q6YHK3 1445 aa28.1■■■□□ 2.09
GSDMD-215ENST00000534018 MAGI3Q5TCQ9 1506 aa28.1■■■□□ 2.09
GSDMD-215ENST00000534018 KCNH8Q96L42 1107 aa28.1■■■□□ 2.09
GSDMD-215ENST00000534018 SAMD9Q5K651 1589 aa28.06■■■□□ 2.08
GSDMD-215ENST00000534018 P3H3Q8IVL6 736 aa28.05■■■□□ 2.08
GSDMD-215ENST00000534018 ARID3CA6NKF2 412 aa28.04■■■□□ 2.08
GSDMD-215ENST00000534018 RAPGEF6Q8TEU7 1601 aa28■■■□□ 2.07
GSDMD-215ENST00000534018 ATP10BO94823 1461 aa27.99■■■□□ 2.07
GSDMD-215ENST00000534018 KIF21BO75037 1637 aa27.97■■■□□ 2.07
GSDMD-215ENST00000534018 CSRNP3Q8WYN3 585 aa27.97■■■□□ 2.07
GSDMD-215ENST00000534018 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
GSDMD-215ENST00000534018 ABCA9Q8IUA7 1624 aa27.96■■■□□ 2.07
GSDMD-215ENST00000534018 HECW2Q9P2P5 1572 aa27.9■■■□□ 2.06
GSDMD-215ENST00000534018 ARAP3Q8WWN8 1544 aa27.88■■■□□ 2.05
GSDMD-215ENST00000534018 EEA1Q15075 1411 aa27.86■■■□□ 2.05
GSDMD-215ENST00000534018 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
GSDMD-215ENST00000534018 NUP153P49790 1475 aaKnown RBP27.83■■■□□ 2.04
GSDMD-215ENST00000534018 FHOD3Q2V2M9 1422 aa27.82■■■□□ 2.04
GSDMD-215ENST00000534018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.81■■■□□ 2.04
GSDMD-215ENST00000534018 HNRNPUL2Q1KMD3 747 aaKnown RBP27.81■■■□□ 2.04
GSDMD-215ENST00000534018 NEO1Q92859 1461 aa27.75■■■□□ 2.03
GSDMD-215ENST00000534018 PHLDB1Q86UU1 1377 aa27.74■■■□□ 2.03
GSDMD-215ENST00000534018 FRMPD1Q5SYB0 1578 aa27.74■■■□□ 2.03
GSDMD-215ENST00000534018 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
GSDMD-215ENST00000534018 RAPGEF3O95398 923 aa27.7■■■□□ 2.02
GSDMD-215ENST00000534018 ADAMTSL3P82987 1691 aa27.68■■■□□ 2.02
GSDMD-215ENST00000534018 ILDR1Q86SU0 546 aaPredicted RBP27.67■■■□□ 2.02
GSDMD-215ENST00000534018 RICTORQ6R327 1708 aa27.65■■■□□ 2.02
GSDMD-215ENST00000534018 BCORL1Q5H9F3 1711 aa27.64■■■□□ 2.02
GSDMD-215ENST00000534018 TTC37Q6PGP7 1564 aa27.64■■■□□ 2.01
GSDMD-215ENST00000534018 CFAP74Q9C0B2 1584 aa27.64■■■□□ 2.01
GSDMD-215ENST00000534018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.62■■■□□ 2.01
GSDMD-215ENST00000534018 PLEKHD1A6NEE1 506 aa27.61■■■□□ 2.01
GSDMD-215ENST00000534018 ARHGEF40Q8TER5 1519 aa27.6■■■□□ 2.01
GSDMD-215ENST00000534018 MADDQ8WXG6 1647 aa27.59■■■□□ 2.01
GSDMD-215ENST00000534018 PTPRMP28827 1452 aa27.58■■■□□ 2.01
GSDMD-215ENST00000534018 CDK13Q14004 1512 aaKnown RBP27.58■■■□□ 2.01
GSDMD-215ENST00000534018 FANCAO15360 1455 aa27.57■■■□□ 2
GSDMD-215ENST00000534018 AKNAQ7Z591 1439 aa27.55■■■□□ 2
GSDMD-215ENST00000534018 DENND4BO75064 1496 aaPredicted RBP27.55■■■□□ 2
GSDMD-215ENST00000534018 EHMT2Q96KQ7 1210 aa27.54■■■□□ 2
GSDMD-215ENST00000534018 ARID4BQ4LE39 1312 aaPredicted RBP27.52■■■□□ 2
GSDMD-215ENST00000534018 RIMS1Q86UR5 1692 aaKnown RBP27.52■■■□□ 2
GSDMD-215ENST00000534018 HECW1Q76N89 1606 aa27.49■■□□□ 1.99
GSDMD-215ENST00000534018 ZMYM4Q5VZL5 1548 aa27.48■■□□□ 1.99
GSDMD-215ENST00000534018 SIGLEC1Q9BZZ2 1709 aa27.47■■□□□ 1.99
GSDMD-215ENST00000534018 MYO5CQ9NQX4 1742 aa27.46■■□□□ 1.99
GSDMD-215ENST00000534018 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.98
GSDMD-215ENST00000534018 ZFYVE16Q7Z3T8 1539 aa27.45■■□□□ 1.98
GSDMD-215ENST00000534018 ARHGAP35Q9NRY4 1499 aa27.43■■□□□ 1.98
GSDMD-215ENST00000534018 FMN1Q68DA7 1419 aa27.42■■□□□ 1.98
GSDMD-215ENST00000534018 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
GSDMD-215ENST00000534018 LRRIQ1Q96JM4 1722 aa27.41■■□□□ 1.98
GSDMD-215ENST00000534018 PCF11O94913 1555 aaKnown RBP27.4■■□□□ 1.98
GSDMD-215ENST00000534018 ATP1B4Q9UN42 357 aaPredicted RBP27.4■■□□□ 1.98
GSDMD-215ENST00000534018 KIF14Q15058 1648 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms