RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
SOX9-AS1-213ENST00000533996 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
SOX9-AS1-213ENST00000533996 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
SOX9-AS1-213ENST00000533996 NUP160Q12769 1436 aa17.13■□□□□ 0.33
SOX9-AS1-213ENST00000533996 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
SOX9-AS1-213ENST00000533996 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
SOX9-AS1-213ENST00000533996 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
SOX9-AS1-213ENST00000533996 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
SOX9-AS1-213ENST00000533996 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
SOX9-AS1-213ENST00000533996 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
SOX9-AS1-213ENST00000533996 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
SOX9-AS1-213ENST00000533996 MAPKBP1O60336 1514 aa16.97■□□□□ 0.31
SOX9-AS1-213ENST00000533996 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
SOX9-AS1-213ENST00000533996 KDM4FA0A1W2PPD8 638 aa16.96■□□□□ 0.31
SOX9-AS1-213ENST00000533996 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
SOX9-AS1-213ENST00000533996 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
SOX9-AS1-213ENST00000533996 KDM6BO15054 1643 aa16.93■□□□□ 0.3
SOX9-AS1-213ENST00000533996 ILDR1Q86SU0 546 aaPredicted RBP16.93■□□□□ 0.3
SOX9-AS1-213ENST00000533996 DIP2BQ9P265 1576 aa16.93■□□□□ 0.3
SOX9-AS1-213ENST00000533996 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
SOX9-AS1-213ENST00000533996 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
SOX9-AS1-213ENST00000533996 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
SOX9-AS1-213ENST00000533996 ADCY10Q96PN6 1610 aa16.85■□□□□ 0.29
SOX9-AS1-213ENST00000533996 RUSC2Q8N2Y8 1516 aa16.84■□□□□ 0.29
SOX9-AS1-213ENST00000533996 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
SOX9-AS1-213ENST00000533996 MAPK8IP2Q13387 824 aaPredicted RBP16.75■□□□□ 0.27
SOX9-AS1-213ENST00000533996 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
SOX9-AS1-213ENST00000533996 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
SOX9-AS1-213ENST00000533996 GLI2P10070 1586 aa16.69■□□□□ 0.26
SOX9-AS1-213ENST00000533996 ADGRL1O94910 1474 aa16.69■□□□□ 0.26
SOX9-AS1-213ENST00000533996 PPRC1Q5VV67 1664 aaKnown RBP16.67■□□□□ 0.26
SOX9-AS1-213ENST00000533996 PTPRGP23470 1445 aa16.67■□□□□ 0.26
SOX9-AS1-213ENST00000533996 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
SOX9-AS1-213ENST00000533996 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
SOX9-AS1-213ENST00000533996 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
SOX9-AS1-213ENST00000533996 CUL7Q14999 1698 aa16.63■□□□□ 0.25
SOX9-AS1-213ENST00000533996 HECW2Q9P2P5 1572 aa16.63■□□□□ 0.25
SOX9-AS1-213ENST00000533996 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
SOX9-AS1-213ENST00000533996 IGF1RP08069 1367 aa16.61■□□□□ 0.25
SOX9-AS1-213ENST00000533996 CARMIL2Q6F5E8 1435 aa16.61■□□□□ 0.25
SOX9-AS1-213ENST00000533996 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
SOX9-AS1-213ENST00000533996 UHRF1BP1LA0JNW5 1464 aa16.6■□□□□ 0.25
SOX9-AS1-213ENST00000533996 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
SOX9-AS1-213ENST00000533996 MAP3K4Q9Y6R4 1608 aa16.57■□□□□ 0.24
SOX9-AS1-213ENST00000533996 TEX14Q8IWB6 1497 aa16.57■□□□□ 0.24
SOX9-AS1-213ENST00000533996 COL17A1Q9UMD9 1497 aaPredicted RBP16.56■□□□□ 0.24
SOX9-AS1-213ENST00000533996 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
SOX9-AS1-213ENST00000533996 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
SOX9-AS1-213ENST00000533996 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
SOX9-AS1-213ENST00000533996 UACAQ9BZF9 1416 aa16.53■□□□□ 0.24
SOX9-AS1-213ENST00000533996 KDM5BQ9UGL1 1544 aa16.51■□□□□ 0.23
SOX9-AS1-213ENST00000533996 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
SOX9-AS1-213ENST00000533996 TTBK1Q5TCY1 1321 aaPredicted RBP16.5■□□□□ 0.23
SOX9-AS1-213ENST00000533996 FBXO41Q8TF61 875 aa16.5■□□□□ 0.23
SOX9-AS1-213ENST00000533996 IQGAP2Q13576 1575 aa16.49■□□□□ 0.23
SOX9-AS1-213ENST00000533996 CARMIL1Q5VZK9 1371 aa16.48■□□□□ 0.23
SOX9-AS1-213ENST00000533996 ZCCHC11Q5TAX3 1644 aaKnown RBP16.45■□□□□ 0.22
SOX9-AS1-213ENST00000533996 DISP1Q96F81 1524 aa16.43■□□□□ 0.22
SOX9-AS1-213ENST00000533996 MAGI3Q5TCQ9 1506 aa16.4■□□□□ 0.22
SOX9-AS1-213ENST00000533996 WDR7Q9Y4E6 1490 aa16.39■□□□□ 0.21
SOX9-AS1-213ENST00000533996 CFAP43Q8NDM7 1665 aa16.39■□□□□ 0.21
SOX9-AS1-213ENST00000533996 UGGT2Q9NYU1 1516 aa16.39■□□□□ 0.21
SOX9-AS1-213ENST00000533996 CD109Q6YHK3 1445 aa16.36■□□□□ 0.21
SOX9-AS1-213ENST00000533996 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
SOX9-AS1-213ENST00000533996 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.2
SOX9-AS1-213ENST00000533996 KIF21BO75037 1637 aa16.31■□□□□ 0.2
SOX9-AS1-213ENST00000533996 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
SOX9-AS1-213ENST00000533996 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
SOX9-AS1-213ENST00000533996 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
SOX9-AS1-213ENST00000533996 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
SOX9-AS1-213ENST00000533996 ADAMTSL3P82987 1691 aa16.26■□□□□ 0.19
SOX9-AS1-213ENST00000533996 PTPRMP28827 1452 aa16.25■□□□□ 0.19
SOX9-AS1-213ENST00000533996 PHLDB1Q86UU1 1377 aa16.25■□□□□ 0.19
SOX9-AS1-213ENST00000533996 ABCA8O94911 1581 aa16.23■□□□□ 0.19
SOX9-AS1-213ENST00000533996 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
SOX9-AS1-213ENST00000533996 CTTNBP2Q8WZ74 1663 aa16.2■□□□□ 0.18
SOX9-AS1-213ENST00000533996 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
SOX9-AS1-213ENST00000533996 BCORL1Q5H9F3 1711 aa16.18■□□□□ 0.18
SOX9-AS1-213ENST00000533996 FAM9AQ8IZU1 332 aaPredicted RBP16.17■□□□□ 0.18
SOX9-AS1-213ENST00000533996 LMTK3Q96Q04 1460 aa16.15■□□□□ 0.18
SOX9-AS1-213ENST00000533996 ABCA9Q8IUA7 1624 aa16.14■□□□□ 0.17
SOX9-AS1-213ENST00000533996 NEO1Q92859 1461 aa16.13■□□□□ 0.17
SOX9-AS1-213ENST00000533996 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
SOX9-AS1-213ENST00000533996 RAPGEF3O95398 923 aa16.1■□□□□ 0.17
SOX9-AS1-213ENST00000533996 ATP10BO94823 1461 aa16.1■□□□□ 0.17
SOX9-AS1-213ENST00000533996 ARID4BQ4LE39 1312 aaPredicted RBP16.08■□□□□ 0.16
SOX9-AS1-213ENST00000533996 CERKQ8TCT0 537 aa16.07■□□□□ 0.16
SOX9-AS1-213ENST00000533996 RIMS1Q86UR5 1692 aaKnown RBP16.06■□□□□ 0.16
SOX9-AS1-213ENST00000533996 FRMPD1Q5SYB0 1578 aa16.04■□□□□ 0.16
SOX9-AS1-213ENST00000533996 ZBTB22O15209 634 aa16.04■□□□□ 0.16
SOX9-AS1-213ENST00000533996 FOXD4L1Q9NU39 408 aa16.02■□□□□ 0.16
SOX9-AS1-213ENST00000533996 ARHGEF40Q8TER5 1519 aa16.01■□□□□ 0.15
SOX9-AS1-213ENST00000533996 SOCS7O14512 581 aa16.01■□□□□ 0.15
SOX9-AS1-213ENST00000533996 POGZQ7Z3K3 1410 aa16.01■□□□□ 0.15
SOX9-AS1-213ENST00000533996 RICTORQ6R327 1708 aa15.99■□□□□ 0.15
SOX9-AS1-213ENST00000533996 HSPA2P54652 639 aa15.99■□□□□ 0.15
SOX9-AS1-213ENST00000533996 FANCAO15360 1455 aa15.98■□□□□ 0.15
SOX9-AS1-213ENST00000533996 DENND4BO75064 1496 aaPredicted RBP15.98■□□□□ 0.15
SOX9-AS1-213ENST00000533996 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
SOX9-AS1-213ENST00000533996 FHOD3Q2V2M9 1422 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms