RNA–Protein interactions for RNA: ENST00000533991.1

RDX-216, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-216ENST00000533991 CUL7Q14999 1698 aa26.27■■□□□ 1.8
RDX-216ENST00000533991 PRG4Q92954 1404 aaPredicted RBP26.24■■□□□ 1.79
RDX-216ENST00000533991 KIAA0586Q9BVV6 1533 aa26.22■■□□□ 1.79
RDX-216ENST00000533991 RAPGEF2Q9Y4G8 1499 aa26.12■■□□□ 1.77
RDX-216ENST00000533991 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
RDX-216ENST00000533991 PRXQ9BXM0 1461 aa26.08■■□□□ 1.77
RDX-216ENST00000533991 CSRNP3Q8WYN3 585 aa26.03■■□□□ 1.76
RDX-216ENST00000533991 TRHP20396 242 aaPredicted RBP25.98■■□□□ 1.75
RDX-216ENST00000533991 IQGAP2Q13576 1575 aa25.96■■□□□ 1.75
RDX-216ENST00000533991 DISP1Q96F81 1524 aa25.94■■□□□ 1.74
RDX-216ENST00000533991 FAM9AQ8IZU1 332 aaPredicted RBP25.94■■□□□ 1.74
RDX-216ENST00000533991 PTPRGP23470 1445 aa25.89■■□□□ 1.74
RDX-216ENST00000533991 UGGT2Q9NYU1 1516 aa25.89■■□□□ 1.74
RDX-216ENST00000533991 TTBK1Q5TCY1 1321 aaPredicted RBP25.88■■□□□ 1.73
RDX-216ENST00000533991 TNIKQ9UKE5 1360 aa25.87■■□□□ 1.73
RDX-216ENST00000533991 ADCY10Q96PN6 1610 aa25.85■■□□□ 1.73
RDX-216ENST00000533991 CARMIL2Q6F5E8 1435 aa25.84■■□□□ 1.73
RDX-216ENST00000533991 EEA1Q15075 1411 aa25.83■■□□□ 1.73
RDX-216ENST00000533991 CTTNBP2Q8WZ74 1663 aa25.75■■□□□ 1.71
RDX-216ENST00000533991 KIAA0556O60303 1618 aa25.74■■□□□ 1.71
RDX-216ENST00000533991 NPM1P06748 294 aaKnown RBP eCLIP25.7■■□□□ 1.7
RDX-216ENST00000533991 UACAQ9BZF9 1416 aa25.7■■□□□ 1.7
RDX-216ENST00000533991 P3H3Q8IVL6 736 aa25.68■■□□□ 1.7
RDX-216ENST00000533991 UHRF1BP1LA0JNW5 1464 aa25.67■■□□□ 1.7
RDX-216ENST00000533991 EHMT2Q96KQ7 1210 aa25.65■■□□□ 1.7
RDX-216ENST00000533991 MAPKBP1O60336 1514 aa25.64■■□□□ 1.7
RDX-216ENST00000533991 ABCC2Q92887 1545 aa25.64■■□□□ 1.7
RDX-216ENST00000533991 PLB1Q6P1J6 1458 aa25.63■■□□□ 1.69
RDX-216ENST00000533991 ABCC10Q5T3U5 1492 aa25.62■■□□□ 1.69
RDX-216ENST00000533991 FAM69CQ0P6D2 419 aa25.62■■□□□ 1.69
RDX-216ENST00000533991 KIF13AQ9H1H9 1805 aa25.62■■□□□ 1.69
RDX-216ENST00000533991 GOLGA3Q08378 1498 aa25.61■■□□□ 1.69
RDX-216ENST00000533991 KIF21BO75037 1637 aa25.61■■□□□ 1.69
RDX-216ENST00000533991 RANGAP1P46060 587 aaPredicted RBP25.58■■□□□ 1.69
RDX-216ENST00000533991 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.68
RDX-216ENST00000533991 ABCA8O94911 1581 aa25.54■■□□□ 1.68
RDX-216ENST00000533991 ASXL2Q76L83 1435 aa25.54■■□□□ 1.68
RDX-216ENST00000533991 SAMD9Q5K651 1589 aa25.53■■□□□ 1.68
RDX-216ENST00000533991 DIP2BQ9P265 1576 aa25.52■■□□□ 1.68
RDX-216ENST00000533991 UBTFP17480 764 aaKnown RBP25.48■■□□□ 1.67
RDX-216ENST00000533991 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
RDX-216ENST00000533991 ZCCHC11Q5TAX3 1644 aaKnown RBP25.45■■□□□ 1.67
RDX-216ENST00000533991 ARID3CA6NKF2 412 aa25.44■■□□□ 1.66
RDX-216ENST00000533991 ATP10BO94823 1461 aa25.41■■□□□ 1.66
RDX-216ENST00000533991 EPRSP07814 1512 aaKnown RBP25.39■■□□□ 1.66
RDX-216ENST00000533991 GLI2P10070 1586 aa25.35■■□□□ 1.65
RDX-216ENST00000533991 ARHGAP35Q9NRY4 1499 aa25.33■■□□□ 1.65
RDX-216ENST00000533991 TSPOAP1O95153 1857 aa25.32■■□□□ 1.64
RDX-216ENST00000533991 KCNH8Q96L42 1107 aa25.32■■□□□ 1.64
RDX-216ENST00000533991 WDR7Q9Y4E6 1490 aa25.32■■□□□ 1.64
RDX-216ENST00000533991 NUP153P49790 1475 aaKnown RBP25.31■■□□□ 1.64
RDX-216ENST00000533991 PPRC1Q5VV67 1664 aaKnown RBP25.29■■□□□ 1.64
RDX-216ENST00000533991 EFCAB5A4FU69 1503 aa25.29■■□□□ 1.64
RDX-216ENST00000533991 RAPGEF6Q8TEU7 1601 aa25.29■■□□□ 1.64
RDX-216ENST00000533991 COL17A1Q9UMD9 1497 aaPredicted RBP25.23■■□□□ 1.63
RDX-216ENST00000533991 MAP3K4Q9Y6R4 1608 aa25.22■■□□□ 1.63
RDX-216ENST00000533991 CD109Q6YHK3 1445 aa25.15■■□□□ 1.62
RDX-216ENST00000533991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.15■■□□□ 1.62
RDX-216ENST00000533991 HNRNPUL2Q1KMD3 747 aaKnown RBP25.15■■□□□ 1.62
RDX-216ENST00000533991 LOC105371045A0A1W2PR82 267 aa25.13■■□□□ 1.61
RDX-216ENST00000533991 CDK13Q14004 1512 aaKnown RBP25.11■■□□□ 1.61
RDX-216ENST00000533991 FMN1Q68DA7 1419 aa25.1■■□□□ 1.61
RDX-216ENST00000533991 KDM6BO15054 1643 aa25.09■■□□□ 1.61
RDX-216ENST00000533991 MAGI3Q5TCQ9 1506 aa25.09■■□□□ 1.61
RDX-216ENST00000533991 PLEKHD1A6NEE1 506 aa25.08■■□□□ 1.61
RDX-216ENST00000533991 ATP1B4Q9UN42 357 aaPredicted RBP25.07■■□□□ 1.6
RDX-216ENST00000533991 CLIP1P30622 1438 aa25.04■■□□□ 1.6
RDX-216ENST00000533991 CFAP43Q8NDM7 1665 aa25.04■■□□□ 1.6
RDX-216ENST00000533991 ABCA9Q8IUA7 1624 aa25.03■■□□□ 1.6
RDX-216ENST00000533991 TEX14Q8IWB6 1497 aa25.02■■□□□ 1.6
RDX-216ENST00000533991 LRRIQ1Q96JM4 1722 aa24.98■■□□□ 1.59
RDX-216ENST00000533991 CASKIN1Q8WXD9 1431 aa24.96■■□□□ 1.59
RDX-216ENST00000533991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.95■■□□□ 1.58
RDX-216ENST00000533991 HECW1Q76N89 1606 aa24.94■■□□□ 1.58
RDX-216ENST00000533991 PCF11O94913 1555 aaKnown RBP24.92■■□□□ 1.58
RDX-216ENST00000533991 CEP162Q5TB80 1403 aa24.91■■□□□ 1.58
RDX-216ENST00000533991 KDM4FA0A1W2PPD8 638 aa24.9■■□□□ 1.58
RDX-216ENST00000533991 ARAP3Q8WWN8 1544 aa24.89■■□□□ 1.57
RDX-216ENST00000533991 TTC37Q6PGP7 1564 aa24.88■■□□□ 1.57
RDX-216ENST00000533991 RAPGEF3O95398 923 aa24.88■■□□□ 1.57
RDX-216ENST00000533991 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
RDX-216ENST00000533991 CDK11AQ9UQ88 783 aaPredicted RBP24.84■■□□□ 1.57
RDX-216ENST00000533991 NEO1Q92859 1461 aa24.83■■□□□ 1.57
RDX-216ENST00000533991 KIF14Q15058 1648 aa24.83■■□□□ 1.57
RDX-216ENST00000533991 PHLDB1Q86UU1 1377 aa24.82■■□□□ 1.56
RDX-216ENST00000533991 FYCO1Q9BQS8 1478 aa24.82■■□□□ 1.56
RDX-216ENST00000533991 PLCH2O75038 1416 aa24.81■■□□□ 1.56
RDX-216ENST00000533991 AKNAQ7Z591 1439 aa24.8■■□□□ 1.56
RDX-216ENST00000533991 FANCAO15360 1455 aa24.77■■□□□ 1.56
RDX-216ENST00000533991 CCDC18Q5T9S5 1454 aa24.76■■□□□ 1.55
RDX-216ENST00000533991 FRMPD1Q5SYB0 1578 aa24.75■■□□□ 1.55
RDX-216ENST00000533991 AEBP2Q6ZN18 517 aaPredicted RBP24.71■■□□□ 1.55
RDX-216ENST00000533991 EFCAB2Q5VUJ9 269 aa24.69■■□□□ 1.54
RDX-216ENST00000533991 DENND4BO75064 1496 aaPredicted RBP24.68■■□□□ 1.54
RDX-216ENST00000533991 SCAPERQ9BY12 1400 aa24.67■■□□□ 1.54
RDX-216ENST00000533991 RICTORQ6R327 1708 aa24.64■■□□□ 1.54
RDX-216ENST00000533991 ADGRL1O94910 1474 aa24.64■■□□□ 1.53
RDX-216ENST00000533991 CDC42BPBQ9Y5S2 1711 aa24.63■■□□□ 1.53
RDX-216ENST00000533991 MYO5CQ9NQX4 1742 aa24.62■■□□□ 1.53
RDX-216ENST00000533991 AFAP1Q8N556 730 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms