RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 KIF27Q86VH2 1401 aa31.72■■■□□ 2.67
UBXN1-216ENST00000533908 KIF13AQ9H1H9 1805 aa31.7■■■□□ 2.66
UBXN1-216ENST00000533908 KIAA0586Q9BVV6 1533 aa31.68■■■□□ 2.66
UBXN1-216ENST00000533908 AEBP2Q6ZN18 517 aaPredicted RBP31.66■■■□□ 2.66
UBXN1-216ENST00000533908 CUL7Q14999 1698 aa31.6■■■□□ 2.65
UBXN1-216ENST00000533908 ADCY10Q96PN6 1610 aa31.58■■■□□ 2.65
UBXN1-216ENST00000533908 NPM1P06748 294 aaKnown RBP eCLIP31.58■■■□□ 2.65
UBXN1-216ENST00000533908 FAM69CQ0P6D2 419 aa31.57■■■□□ 2.64
UBXN1-216ENST00000533908 ABCC10Q5T3U5 1492 aa31.56■■■□□ 2.64
UBXN1-216ENST00000533908 CARMIL1Q5VZK9 1371 aa31.56■■■□□ 2.64
UBXN1-216ENST00000533908 MAPKBP1O60336 1514 aa31.52■■■□□ 2.64
UBXN1-216ENST00000533908 DIP2BQ9P265 1576 aa31.44■■■□□ 2.62
UBXN1-216ENST00000533908 PTPRGP23470 1445 aa31.43■■■□□ 2.62
UBXN1-216ENST00000533908 TTBK1Q5TCY1 1321 aaPredicted RBP31.41■■■□□ 2.62
UBXN1-216ENST00000533908 TNIKQ9UKE5 1360 aa31.34■■■□□ 2.61
UBXN1-216ENST00000533908 CARMIL2Q6F5E8 1435 aa31.32■■■□□ 2.61
UBXN1-216ENST00000533908 IQGAP2Q13576 1575 aa31.31■■■□□ 2.6
UBXN1-216ENST00000533908 DISP1Q96F81 1524 aa31.25■■■□□ 2.59
UBXN1-216ENST00000533908 ABCC2Q92887 1545 aa31.24■■■□□ 2.59
UBXN1-216ENST00000533908 TSPOAP1O95153 1857 aa31.24■■■□□ 2.59
UBXN1-216ENST00000533908 RAPGEF2Q9Y4G8 1499 aa31.22■■■□□ 2.59
UBXN1-216ENST00000533908 ASXL2Q76L83 1435 aa31.18■■■□□ 2.58
UBXN1-216ENST00000533908 KDM6BO15054 1643 aa31.18■■■□□ 2.58
UBXN1-216ENST00000533908 UHRF1BP1LA0JNW5 1464 aa31.18■■■□□ 2.58
UBXN1-216ENST00000533908 UACAQ9BZF9 1416 aa31.17■■■□□ 2.58
UBXN1-216ENST00000533908 UGGT2Q9NYU1 1516 aa31.14■■■□□ 2.58
UBXN1-216ENST00000533908 PLB1Q6P1J6 1458 aa31.12■■■□□ 2.57
UBXN1-216ENST00000533908 KDM4FA0A1W2PPD8 638 aa31.08■■■□□ 2.57
UBXN1-216ENST00000533908 GLI2P10070 1586 aa31.07■■■□□ 2.56
UBXN1-216ENST00000533908 KDM5BQ9UGL1 1544 aa31.06■■■□□ 2.56
UBXN1-216ENST00000533908 PPRC1Q5VV67 1664 aaKnown RBP31.05■■■□□ 2.56
UBXN1-216ENST00000533908 KIAA0556O60303 1618 aa31.04■■■□□ 2.56
UBXN1-216ENST00000533908 EPRSP07814 1512 aaKnown RBP30.98■■■□□ 2.55
UBXN1-216ENST00000533908 ZCCHC11Q5TAX3 1644 aaKnown RBP30.96■■■□□ 2.55
UBXN1-216ENST00000533908 COL17A1Q9UMD9 1497 aaPredicted RBP30.95■■■□□ 2.54
UBXN1-216ENST00000533908 CTTNBP2Q8WZ74 1663 aa30.9■■■□□ 2.54
UBXN1-216ENST00000533908 PRXQ9BXM0 1461 aa30.9■■■□□ 2.54
UBXN1-216ENST00000533908 MAP3K4Q9Y6R4 1608 aa30.9■■■□□ 2.54
UBXN1-216ENST00000533908 GOLGA3Q08378 1498 aa30.82■■■□□ 2.53
UBXN1-216ENST00000533908 WDR7Q9Y4E6 1490 aa30.82■■■□□ 2.52
UBXN1-216ENST00000533908 ABCA8O94911 1581 aa30.8■■■□□ 2.52
UBXN1-216ENST00000533908 TEX14Q8IWB6 1497 aa30.77■■■□□ 2.52
UBXN1-216ENST00000533908 KCNH8Q96L42 1107 aa30.75■■■□□ 2.51
UBXN1-216ENST00000533908 P3H3Q8IVL6 736 aa30.71■■■□□ 2.51
UBXN1-216ENST00000533908 ADGRL1O94910 1474 aa30.7■■■□□ 2.5
UBXN1-216ENST00000533908 CD109Q6YHK3 1445 aa30.68■■■□□ 2.5
UBXN1-216ENST00000533908 CSRNP3Q8WYN3 585 aa30.66■■■□□ 2.5
UBXN1-216ENST00000533908 MAGI3Q5TCQ9 1506 aa30.64■■■□□ 2.5
UBXN1-216ENST00000533908 ARID3CA6NKF2 412 aa30.64■■■□□ 2.5
UBXN1-216ENST00000533908 CFAP43Q8NDM7 1665 aa30.61■■■□□ 2.49
UBXN1-216ENST00000533908 ATP10BO94823 1461 aa30.6■■■□□ 2.49
UBXN1-216ENST00000533908 SAMD9Q5K651 1589 aa30.5■■■□□ 2.47
UBXN1-216ENST00000533908 FAM9AQ8IZU1 332 aaPredicted RBP30.49■■■□□ 2.47
UBXN1-216ENST00000533908 RANGAP1P46060 587 aaPredicted RBP30.43■■■□□ 2.46
UBXN1-216ENST00000533908 ARAP3Q8WWN8 1544 aa30.42■■■□□ 2.46
UBXN1-216ENST00000533908 RAPGEF6Q8TEU7 1601 aa30.4■■■□□ 2.46
UBXN1-216ENST00000533908 ABCA9Q8IUA7 1624 aa30.39■■■□□ 2.46
UBXN1-216ENST00000533908 EEA1Q15075 1411 aa30.38■■■□□ 2.45
UBXN1-216ENST00000533908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.36■■■□□ 2.45
UBXN1-216ENST00000533908 HNRNPUL2Q1KMD3 747 aaKnown RBP30.36■■■□□ 2.45
UBXN1-216ENST00000533908 NUP153P49790 1475 aaKnown RBP30.36■■■□□ 2.45
UBXN1-216ENST00000533908 FHOD3Q2V2M9 1422 aa30.35■■■□□ 2.45
UBXN1-216ENST00000533908 KIF21BO75037 1637 aa30.32■■■□□ 2.44
UBXN1-216ENST00000533908 RAPGEF3O95398 923 aa30.31■■■□□ 2.44
UBXN1-216ENST00000533908 HECW2Q9P2P5 1572 aa30.31■■■□□ 2.44
UBXN1-216ENST00000533908 PHLDB1Q86UU1 1377 aa30.29■■■□□ 2.44
UBXN1-216ENST00000533908 ILDR1Q86SU0 546 aaPredicted RBP30.24■■■□□ 2.43
UBXN1-216ENST00000533908 NEO1Q92859 1461 aa30.24■■■□□ 2.43
UBXN1-216ENST00000533908 PLEKHD1A6NEE1 506 aa30.2■■■□□ 2.43
UBXN1-216ENST00000533908 FRMPD1Q5SYB0 1578 aa30.16■■■□□ 2.42
UBXN1-216ENST00000533908 EFCAB5A4FU69 1503 aa30.13■■■□□ 2.41
UBXN1-216ENST00000533908 EHMT2Q96KQ7 1210 aa30.12■■■□□ 2.41
UBXN1-216ENST00000533908 ADAMTSL3P82987 1691 aa30.11■■■□□ 2.41
UBXN1-216ENST00000533908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.09■■■□□ 2.41
UBXN1-216ENST00000533908 PTPRMP28827 1452 aa30.06■■■□□ 2.4
UBXN1-216ENST00000533908 AKNAQ7Z591 1439 aa30.06■■■□□ 2.4
UBXN1-216ENST00000533908 CDK13Q14004 1512 aaKnown RBP30.05■■■□□ 2.4
UBXN1-216ENST00000533908 FANCAO15360 1455 aa30.04■■■□□ 2.4
UBXN1-216ENST00000533908 DENND4BO75064 1496 aaPredicted RBP30.04■■■□□ 2.4
UBXN1-216ENST00000533908 UBTFP17480 764 aaKnown RBP30.03■■■□□ 2.4
UBXN1-216ENST00000533908 TTC37Q6PGP7 1564 aa30.03■■■□□ 2.4
UBXN1-216ENST00000533908 ARID4BQ4LE39 1312 aaPredicted RBP30.02■■■□□ 2.4
UBXN1-216ENST00000533908 CHIC1Q5VXU3 224 aa30.02■■■□□ 2.4
UBXN1-216ENST00000533908 RICTORQ6R327 1708 aa30.01■■■□□ 2.39
UBXN1-216ENST00000533908 BCORL1Q5H9F3 1711 aa30■■■□□ 2.39
UBXN1-216ENST00000533908 ARHGAP35Q9NRY4 1499 aa29.95■■■□□ 2.39
UBXN1-216ENST00000533908 ATP1B4Q9UN42 357 aaPredicted RBP29.95■■■□□ 2.39
UBXN1-216ENST00000533908 MADDQ8WXG6 1647 aa29.95■■■□□ 2.38
UBXN1-216ENST00000533908 ARHGEF40Q8TER5 1519 aa29.95■■■□□ 2.38
UBXN1-216ENST00000533908 CFAP74Q9C0B2 1584 aa29.92■■■□□ 2.38
UBXN1-216ENST00000533908 PLCH2O75038 1416 aa29.91■■■□□ 2.38
UBXN1-216ENST00000533908 YEATS2Q9ULM3 1422 aa29.91■■■□□ 2.38
UBXN1-216ENST00000533908 FMN1Q68DA7 1419 aa29.88■■■□□ 2.37
UBXN1-216ENST00000533908 ZMYM4Q5VZL5 1548 aa29.88■■■□□ 2.37
UBXN1-216ENST00000533908 SIGLEC1Q9BZZ2 1709 aa29.88■■■□□ 2.37
UBXN1-216ENST00000533908 SCAPERQ9BY12 1400 aa29.87■■■□□ 2.37
UBXN1-216ENST00000533908 HECW1Q76N89 1606 aa29.84■■■□□ 2.37
UBXN1-216ENST00000533908 ZFYVE16Q7Z3T8 1539 aa29.83■■■□□ 2.37
UBXN1-216ENST00000533908 RIMS1Q86UR5 1692 aaKnown RBP29.82■■■□□ 2.36
UBXN1-216ENST00000533908 MAGI2Q86UL8 1455 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms