RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.51
CLP1-206ENST00000533905 ADCY10Q96PN6 1610 aa18.19■□□□□ 0.5
CLP1-206ENST00000533905 KIF27Q86VH2 1401 aa18.13■□□□□ 0.49
CLP1-206ENST00000533905 KIAA0586Q9BVV6 1533 aa18.13■□□□□ 0.49
CLP1-206ENST00000533905 CUL7Q14999 1698 aa18.12■□□□□ 0.49
CLP1-206ENST00000533905 DIP2BQ9P265 1576 aa18.08■□□□□ 0.49
CLP1-206ENST00000533905 ABCC10Q5T3U5 1492 aa18.07■□□□□ 0.48
CLP1-206ENST00000533905 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
CLP1-206ENST00000533905 MAPKBP1O60336 1514 aa18.05■□□□□ 0.48
CLP1-206ENST00000533905 TTBK1Q5TCY1 1321 aaPredicted RBP18.03■□□□□ 0.48
CLP1-206ENST00000533905 FAM69CQ0P6D2 419 aa18.02■□□□□ 0.48
CLP1-206ENST00000533905 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
CLP1-206ENST00000533905 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
CLP1-206ENST00000533905 PTPRGP23470 1445 aa17.95■□□□□ 0.46
CLP1-206ENST00000533905 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
CLP1-206ENST00000533905 ABCC2Q92887 1545 aa17.93■□□□□ 0.46
CLP1-206ENST00000533905 TNIKQ9UKE5 1360 aa17.91■□□□□ 0.46
CLP1-206ENST00000533905 TSPOAP1O95153 1857 aa17.91■□□□□ 0.46
CLP1-206ENST00000533905 PPRC1Q5VV67 1664 aaKnown RBP17.9■□□□□ 0.46
CLP1-206ENST00000533905 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
CLP1-206ENST00000533905 NPM1P06748 294 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLP1-206ENST00000533905 ASXL2Q76L83 1435 aa17.88■□□□□ 0.45
CLP1-206ENST00000533905 UGGT2Q9NYU1 1516 aa17.87■□□□□ 0.45
CLP1-206ENST00000533905 KDM6BO15054 1643 aa17.87■□□□□ 0.45
CLP1-206ENST00000533905 KIAA0556O60303 1618 aa17.87■□□□□ 0.45
CLP1-206ENST00000533905 CARMIL2Q6F5E8 1435 aa17.84■□□□□ 0.45
CLP1-206ENST00000533905 UHRF1BP1LA0JNW5 1464 aa17.83■□□□□ 0.45
CLP1-206ENST00000533905 UACAQ9BZF9 1416 aa17.83■□□□□ 0.45
CLP1-206ENST00000533905 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
CLP1-206ENST00000533905 ZCCHC11Q5TAX3 1644 aaKnown RBP17.81■□□□□ 0.44
CLP1-206ENST00000533905 KDM4FA0A1W2PPD8 638 aa17.81■□□□□ 0.44
CLP1-206ENST00000533905 KDM5BQ9UGL1 1544 aa17.8■□□□□ 0.44
CLP1-206ENST00000533905 PLB1Q6P1J6 1458 aa17.8■□□□□ 0.44
CLP1-206ENST00000533905 EPRSP07814 1512 aaKnown RBP17.78■□□□□ 0.44
CLP1-206ENST00000533905 GLI2P10070 1586 aa17.78■□□□□ 0.44
CLP1-206ENST00000533905 PRXQ9BXM0 1461 aa17.76■□□□□ 0.43
CLP1-206ENST00000533905 CTTNBP2Q8WZ74 1663 aa17.76■□□□□ 0.43
CLP1-206ENST00000533905 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
CLP1-206ENST00000533905 ABCA8O94911 1581 aa17.7■□□□□ 0.42
CLP1-206ENST00000533905 WDR7Q9Y4E6 1490 aa17.67■□□□□ 0.42
CLP1-206ENST00000533905 ARID3CA6NKF2 412 aa17.64■□□□□ 0.41
CLP1-206ENST00000533905 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
CLP1-206ENST00000533905 ADGRL1O94910 1474 aa17.62■□□□□ 0.41
CLP1-206ENST00000533905 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
CLP1-206ENST00000533905 GOLGA3Q08378 1498 aa17.57■□□□□ 0.4
CLP1-206ENST00000533905 KCNH8Q96L42 1107 aa17.55■□□□□ 0.4
CLP1-206ENST00000533905 ATP10BO94823 1461 aa17.55■□□□□ 0.4
CLP1-206ENST00000533905 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
CLP1-206ENST00000533905 TEX14Q8IWB6 1497 aa17.53■□□□□ 0.4
CLP1-206ENST00000533905 MAGI3Q5TCQ9 1506 aa17.52■□□□□ 0.4
CLP1-206ENST00000533905 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.39
CLP1-206ENST00000533905 FHOD3Q2V2M9 1422 aa17.5■□□□□ 0.39
CLP1-206ENST00000533905 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
CLP1-206ENST00000533905 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
CLP1-206ENST00000533905 FAM9AQ8IZU1 332 aaPredicted RBP17.49■□□□□ 0.39
CLP1-206ENST00000533905 NUP153P49790 1475 aaKnown RBP17.47■□□□□ 0.39
CLP1-206ENST00000533905 KIF21BO75037 1637 aa17.47■□□□□ 0.39
CLP1-206ENST00000533905 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
CLP1-206ENST00000533905 ABCA9Q8IUA7 1624 aa17.43■□□□□ 0.38
CLP1-206ENST00000533905 FRMPD1Q5SYB0 1578 aa17.43■□□□□ 0.38
CLP1-206ENST00000533905 HECW2Q9P2P5 1572 aa17.41■□□□□ 0.38
CLP1-206ENST00000533905 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
CLP1-206ENST00000533905 ARAP3Q8WWN8 1544 aa17.38■□□□□ 0.37
CLP1-206ENST00000533905 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
CLP1-206ENST00000533905 CDK13Q14004 1512 aaKnown RBP17.36■□□□□ 0.37
CLP1-206ENST00000533905 EEA1Q15075 1411 aa17.34■□□□□ 0.37
CLP1-206ENST00000533905 TTC37Q6PGP7 1564 aa17.33■□□□□ 0.37
CLP1-206ENST00000533905 SIGLEC1Q9BZZ2 1709 aa17.32■□□□□ 0.36
CLP1-206ENST00000533905 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLP1-206ENST00000533905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
CLP1-206ENST00000533905 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
CLP1-206ENST00000533905 ADAMTSL3P82987 1691 aa17.27■□□□□ 0.36
CLP1-206ENST00000533905 NEO1Q92859 1461 aa17.27■□□□□ 0.36
CLP1-206ENST00000533905 ILDR1Q86SU0 546 aaPredicted RBP17.27■□□□□ 0.36
CLP1-206ENST00000533905 EFCAB5A4FU69 1503 aa17.26■□□□□ 0.35
CLP1-206ENST00000533905 ARHGAP35Q9NRY4 1499 aa17.25■□□□□ 0.35
CLP1-206ENST00000533905 RICTORQ6R327 1708 aa17.25■□□□□ 0.35
CLP1-206ENST00000533905 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
CLP1-206ENST00000533905 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
CLP1-206ENST00000533905 ARHGEF40Q8TER5 1519 aa17.23■□□□□ 0.35
CLP1-206ENST00000533905 YEATS2Q9ULM3 1422 aa17.22■□□□□ 0.35
CLP1-206ENST00000533905 PTPRMP28827 1452 aa17.22■□□□□ 0.35
CLP1-206ENST00000533905 BCORL1Q5H9F3 1711 aa17.21■□□□□ 0.35
CLP1-206ENST00000533905 FANCAO15360 1455 aa17.21■□□□□ 0.35
CLP1-206ENST00000533905 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
CLP1-206ENST00000533905 AKNAQ7Z591 1439 aa17.21■□□□□ 0.34
CLP1-206ENST00000533905 KIF14Q15058 1648 aa17.2■□□□□ 0.34
CLP1-206ENST00000533905 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
CLP1-206ENST00000533905 PHLDB1Q86UU1 1377 aa17.16■□□□□ 0.34
CLP1-206ENST00000533905 PLEKHD1A6NEE1 506 aa17.16■□□□□ 0.34
CLP1-206ENST00000533905 ZMYM4Q5VZL5 1548 aa17.15■□□□□ 0.34
CLP1-206ENST00000533905 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
CLP1-206ENST00000533905 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
CLP1-206ENST00000533905 UBTFP17480 764 aaKnown RBP17.13■□□□□ 0.33
CLP1-206ENST00000533905 LMTK3Q96Q04 1460 aa17.12■□□□□ 0.33
CLP1-206ENST00000533905 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
CLP1-206ENST00000533905 ZFYVE16Q7Z3T8 1539 aa17.11■□□□□ 0.33
CLP1-206ENST00000533905 ATP1B4Q9UN42 357 aaPredicted RBP17.1■□□□□ 0.33
CLP1-206ENST00000533905 ARID4BQ4LE39 1312 aaPredicted RBP17.1■□□□□ 0.33
CLP1-206ENST00000533905 PLCH2O75038 1416 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms