RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 RUSC2Q8N2Y8 1516 aa27.76■■■□□ 2.03
RDX-214ENST00000533678 ERCC6L2Q5T890 1561 aa27.73■■■□□ 2.03
RDX-214ENST00000533678 JPH4Q96JJ6 628 aa27.72■■■□□ 2.03
RDX-214ENST00000533678 KIAA0586Q9BVV6 1533 aa27.72■■■□□ 2.03
RDX-214ENST00000533678 RAPGEF2Q9Y4G8 1499 aa27.66■■■□□ 2.02
RDX-214ENST00000533678 PRG4Q92954 1404 aaPredicted RBP27.65■■■□□ 2.02
RDX-214ENST00000533678 EEA1Q15075 1411 aa27.53■■■□□ 2
RDX-214ENST00000533678 IQGAP2Q13576 1575 aa27.52■■■□□ 2
RDX-214ENST00000533678 PRXQ9BXM0 1461 aa27.51■■■□□ 2
RDX-214ENST00000533678 KIF13AQ9H1H9 1805 aa27.5■■□□□ 1.99
RDX-214ENST00000533678 CSRNP3Q8WYN3 585 aa27.48■■□□□ 1.99
RDX-214ENST00000533678 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
RDX-214ENST00000533678 CARMIL2Q6F5E8 1435 aa27.44■■□□□ 1.98
RDX-214ENST00000533678 CTTNBP2Q8WZ74 1663 aa27.43■■□□□ 1.98
RDX-214ENST00000533678 UGGT2Q9NYU1 1516 aa27.39■■□□□ 1.98
RDX-214ENST00000533678 TNIKQ9UKE5 1360 aa27.35■■□□□ 1.97
RDX-214ENST00000533678 PTPRGP23470 1445 aa27.33■■□□□ 1.96
RDX-214ENST00000533678 DISP1Q96F81 1524 aa27.31■■□□□ 1.96
RDX-214ENST00000533678 MAPKBP1O60336 1514 aa27.27■■□□□ 1.96
RDX-214ENST00000533678 NPM1P06748 294 aaKnown RBP eCLIP27.26■■□□□ 1.95
RDX-214ENST00000533678 KIAA0556O60303 1618 aa27.26■■□□□ 1.95
RDX-214ENST00000533678 DIP2BQ9P265 1576 aa27.26■■□□□ 1.95
RDX-214ENST00000533678 GOLGA3Q08378 1498 aa27.25■■□□□ 1.95
RDX-214ENST00000533678 FAM9AQ8IZU1 332 aaPredicted RBP27.25■■□□□ 1.95
RDX-214ENST00000533678 ADCY10Q96PN6 1610 aa27.25■■□□□ 1.95
RDX-214ENST00000533678 ABCC10Q5T3U5 1492 aa27.24■■□□□ 1.95
RDX-214ENST00000533678 KIF21BO75037 1637 aa27.23■■□□□ 1.95
RDX-214ENST00000533678 TTBK1Q5TCY1 1321 aaPredicted RBP27.16■■□□□ 1.94
RDX-214ENST00000533678 UHRF1BP1LA0JNW5 1464 aa27.15■■□□□ 1.94
RDX-214ENST00000533678 UACAQ9BZF9 1416 aa27.15■■□□□ 1.94
RDX-214ENST00000533678 KDM6BO15054 1643 aa27.14■■□□□ 1.94
RDX-214ENST00000533678 FAM69CQ0P6D2 419 aa27.12■■□□□ 1.93
RDX-214ENST00000533678 ABCC2Q92887 1545 aa27.1■■□□□ 1.93
RDX-214ENST00000533678 SAMD9Q5K651 1589 aa27.05■■□□□ 1.92
RDX-214ENST00000533678 TSPOAP1O95153 1857 aa27.02■■□□□ 1.92
RDX-214ENST00000533678 KDM5BQ9UGL1 1544 aa27■■□□□ 1.91
RDX-214ENST00000533678 ABCA8O94911 1581 aa26.97■■□□□ 1.91
RDX-214ENST00000533678 PLB1Q6P1J6 1458 aa26.96■■□□□ 1.91
RDX-214ENST00000533678 UBTFP17480 764 aaKnown RBP26.96■■□□□ 1.91
RDX-214ENST00000533678 P3H3Q8IVL6 736 aa26.95■■□□□ 1.9
RDX-214ENST00000533678 ZCCHC11Q5TAX3 1644 aaKnown RBP26.94■■□□□ 1.9
RDX-214ENST00000533678 EFCAB5A4FU69 1503 aa26.93■■□□□ 1.9
RDX-214ENST00000533678 ASXL2Q76L83 1435 aa26.92■■□□□ 1.9
RDX-214ENST00000533678 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
RDX-214ENST00000533678 KDM4FA0A1W2PPD8 638 aa26.86■■□□□ 1.89
RDX-214ENST00000533678 EHMT2Q96KQ7 1210 aa26.85■■□□□ 1.89
RDX-214ENST00000533678 GLI2P10070 1586 aa26.84■■□□□ 1.89
RDX-214ENST00000533678 PPRC1Q5VV67 1664 aaKnown RBP26.83■■□□□ 1.89
RDX-214ENST00000533678 RAPGEF6Q8TEU7 1601 aa26.83■■□□□ 1.88
RDX-214ENST00000533678 FHOD3Q2V2M9 1422 aa26.82■■□□□ 1.88
RDX-214ENST00000533678 EPRSP07814 1512 aaKnown RBP26.77■■□□□ 1.88
RDX-214ENST00000533678 WDR7Q9Y4E6 1490 aa26.77■■□□□ 1.88
RDX-214ENST00000533678 ATP10BO94823 1461 aa26.74■■□□□ 1.87
RDX-214ENST00000533678 ADGRL1O94910 1474 aa26.72■■□□□ 1.87
RDX-214ENST00000533678 ARHGAP35Q9NRY4 1499 aa26.71■■□□□ 1.87
RDX-214ENST00000533678 MAP3K4Q9Y6R4 1608 aa26.69■■□□□ 1.86
RDX-214ENST00000533678 NUP153P49790 1475 aaKnown RBP26.68■■□□□ 1.86
RDX-214ENST00000533678 FMN1Q68DA7 1419 aa26.68■■□□□ 1.86
RDX-214ENST00000533678 ARID3CA6NKF2 412 aa26.64■■□□□ 1.86
RDX-214ENST00000533678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.62■■□□□ 1.85
RDX-214ENST00000533678 HNRNPUL2Q1KMD3 747 aaKnown RBP26.62■■□□□ 1.85
RDX-214ENST00000533678 KCNH8Q96L42 1107 aa26.62■■□□□ 1.85
RDX-214ENST00000533678 CFAP43Q8NDM7 1665 aa26.62■■□□□ 1.85
RDX-214ENST00000533678 TEX14Q8IWB6 1497 aa26.61■■□□□ 1.85
RDX-214ENST00000533678 CD109Q6YHK3 1445 aa26.56■■□□□ 1.84
RDX-214ENST00000533678 COL17A1Q9UMD9 1497 aaPredicted RBP26.55■■□□□ 1.84
RDX-214ENST00000533678 HECW1Q76N89 1606 aa26.55■■□□□ 1.84
RDX-214ENST00000533678 PLEKHD1A6NEE1 506 aa26.55■■□□□ 1.84
RDX-214ENST00000533678 MAGI3Q5TCQ9 1506 aa26.54■■□□□ 1.84
RDX-214ENST00000533678 HECW2Q9P2P5 1572 aa26.54■■□□□ 1.84
RDX-214ENST00000533678 ILDR1Q86SU0 546 aaPredicted RBP26.53■■□□□ 1.84
RDX-214ENST00000533678 CLIP1P30622 1438 aa26.52■■□□□ 1.84
RDX-214ENST00000533678 ABCA9Q8IUA7 1624 aa26.51■■□□□ 1.83
RDX-214ENST00000533678 ATP1B4Q9UN42 357 aaPredicted RBP26.47■■□□□ 1.83
RDX-214ENST00000533678 CDK13Q14004 1512 aaKnown RBP26.44■■□□□ 1.82
RDX-214ENST00000533678 CDK11AQ9UQ88 783 aaPredicted RBP26.44■■□□□ 1.82
RDX-214ENST00000533678 CASKIN1Q8WXD9 1431 aa26.43■■□□□ 1.82
RDX-214ENST00000533678 PHLDB1Q86UU1 1377 aa26.39■■□□□ 1.82
RDX-214ENST00000533678 PCF11O94913 1555 aaKnown RBP26.38■■□□□ 1.81
RDX-214ENST00000533678 LRRIQ1Q96JM4 1722 aa26.38■■□□□ 1.81
RDX-214ENST00000533678 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
RDX-214ENST00000533678 FYCO1Q9BQS8 1478 aa26.37■■□□□ 1.81
RDX-214ENST00000533678 CEP162Q5TB80 1403 aa26.36■■□□□ 1.81
RDX-214ENST00000533678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.34■■□□□ 1.81
RDX-214ENST00000533678 NEO1Q92859 1461 aa26.32■■□□□ 1.8
RDX-214ENST00000533678 ARAP3Q8WWN8 1544 aa26.31■■□□□ 1.8
RDX-214ENST00000533678 LOC105371045A0A1W2PR82 267 aa26.31■■□□□ 1.8
RDX-214ENST00000533678 TROQ12816 1431 aaPredicted RBP26.3■■□□□ 1.8
RDX-214ENST00000533678 TTC37Q6PGP7 1564 aa26.28■■□□□ 1.8
RDX-214ENST00000533678 KIF14Q15058 1648 aa26.26■■□□□ 1.79
RDX-214ENST00000533678 CFAP74Q9C0B2 1584 aa26.26■■□□□ 1.79
RDX-214ENST00000533678 MYO5CQ9NQX4 1742 aa26.21■■□□□ 1.79
RDX-214ENST00000533678 FANCAO15360 1455 aa26.21■■□□□ 1.79
RDX-214ENST00000533678 PLCH2O75038 1416 aa26.21■■□□□ 1.79
RDX-214ENST00000533678 AKNAQ7Z591 1439 aa26.18■■□□□ 1.78
RDX-214ENST00000533678 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
RDX-214ENST00000533678 DENND4BO75064 1496 aaPredicted RBP26.11■■□□□ 1.77
RDX-214ENST00000533678 RAPGEF3O95398 923 aa26.09■■□□□ 1.77
RDX-214ENST00000533678 RICTORQ6R327 1708 aa26.08■■□□□ 1.76
RDX-214ENST00000533678 VPS8Q8N3P4 1428 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms