RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
CAPRIN1-213ENST00000533562 PRG4Q92954 1404 aaPredicted RBP21.45■■□□□ 1.02
CAPRIN1-213ENST00000533562 CUL7Q14999 1698 aa21.37■■□□□ 1.01
CAPRIN1-213ENST00000533562 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
CAPRIN1-213ENST00000533562 KIAA0586Q9BVV6 1533 aa21.35■■□□□ 1.01
CAPRIN1-213ENST00000533562 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
CAPRIN1-213ENST00000533562 NPM1P06748 294 aaKnown RBP eCLIP21.29■■□□□ 1
CAPRIN1-213ENST00000533562 CARMIL2Q6F5E8 1435 aa21.18■□□□□ 0.98
CAPRIN1-213ENST00000533562 PTPRGP23470 1445 aa21.16■□□□□ 0.98
CAPRIN1-213ENST00000533562 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
CAPRIN1-213ENST00000533562 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
CAPRIN1-213ENST00000533562 FAM69CQ0P6D2 419 aa21.13■□□□□ 0.97
CAPRIN1-213ENST00000533562 TNIKQ9UKE5 1360 aa21.12■□□□□ 0.97
CAPRIN1-213ENST00000533562 IQGAP2Q13576 1575 aa21.12■□□□□ 0.97
CAPRIN1-213ENST00000533562 ADCY10Q96PN6 1610 aa21.11■□□□□ 0.97
CAPRIN1-213ENST00000533562 MAPKBP1O60336 1514 aa21.09■□□□□ 0.97
CAPRIN1-213ENST00000533562 ABCC10Q5T3U5 1492 aa21.08■□□□□ 0.97
CAPRIN1-213ENST00000533562 KIF13AQ9H1H9 1805 aa21.06■□□□□ 0.96
CAPRIN1-213ENST00000533562 DISP1Q96F81 1524 aa21.01■□□□□ 0.95
CAPRIN1-213ENST00000533562 UGGT2Q9NYU1 1516 aa20.99■□□□□ 0.95
CAPRIN1-213ENST00000533562 ABCC2Q92887 1545 aa20.99■□□□□ 0.95
CAPRIN1-213ENST00000533562 UACAQ9BZF9 1416 aa20.98■□□□□ 0.95
CAPRIN1-213ENST00000533562 DIP2BQ9P265 1576 aa20.97■□□□□ 0.95
CAPRIN1-213ENST00000533562 UHRF1BP1LA0JNW5 1464 aa20.96■□□□□ 0.95
CAPRIN1-213ENST00000533562 PRXQ9BXM0 1461 aa20.94■□□□□ 0.94
CAPRIN1-213ENST00000533562 PLB1Q6P1J6 1458 aa20.92■□□□□ 0.94
CAPRIN1-213ENST00000533562 GOLGA3Q08378 1498 aa20.9■□□□□ 0.94
CAPRIN1-213ENST00000533562 ASXL2Q76L83 1435 aa20.9■□□□□ 0.94
CAPRIN1-213ENST00000533562 CSRNP3Q8WYN3 585 aa20.9■□□□□ 0.94
CAPRIN1-213ENST00000533562 KIAA0556O60303 1618 aa20.89■□□□□ 0.94
CAPRIN1-213ENST00000533562 FAM9AQ8IZU1 332 aaPredicted RBP20.88■□□□□ 0.93
CAPRIN1-213ENST00000533562 CTTNBP2Q8WZ74 1663 aa20.87■□□□□ 0.93
CAPRIN1-213ENST00000533562 KDM5BQ9UGL1 1544 aa20.86■□□□□ 0.93
CAPRIN1-213ENST00000533562 TSPOAP1O95153 1857 aa20.84■□□□□ 0.93
CAPRIN1-213ENST00000533562 GLI2P10070 1586 aa20.8■□□□□ 0.92
CAPRIN1-213ENST00000533562 EEA1Q15075 1411 aa20.79■□□□□ 0.92
CAPRIN1-213ENST00000533562 KDM6BO15054 1643 aa20.78■□□□□ 0.92
CAPRIN1-213ENST00000533562 ZCCHC11Q5TAX3 1644 aaKnown RBP20.76■□□□□ 0.91
CAPRIN1-213ENST00000533562 EPRSP07814 1512 aaKnown RBP20.76■□□□□ 0.91
CAPRIN1-213ENST00000533562 P3H3Q8IVL6 736 aa20.75■□□□□ 0.91
CAPRIN1-213ENST00000533562 ABCA8O94911 1581 aa20.72■□□□□ 0.91
CAPRIN1-213ENST00000533562 WDR7Q9Y4E6 1490 aa20.71■□□□□ 0.91
CAPRIN1-213ENST00000533562 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
CAPRIN1-213ENST00000533562 TEX14Q8IWB6 1497 aa20.68■□□□□ 0.9
CAPRIN1-213ENST00000533562 MAP3K4Q9Y6R4 1608 aa20.66■□□□□ 0.9
CAPRIN1-213ENST00000533562 PPRC1Q5VV67 1664 aaKnown RBP20.66■□□□□ 0.9
CAPRIN1-213ENST00000533562 RANGAP1P46060 587 aaPredicted RBP20.64■□□□□ 0.89
CAPRIN1-213ENST00000533562 ARID3CA6NKF2 412 aa20.62■□□□□ 0.89
CAPRIN1-213ENST00000533562 CD109Q6YHK3 1445 aa20.61■□□□□ 0.89
CAPRIN1-213ENST00000533562 SAMD9Q5K651 1589 aa20.6■□□□□ 0.89
CAPRIN1-213ENST00000533562 ATP10BO94823 1461 aa20.59■□□□□ 0.89
CAPRIN1-213ENST00000533562 COL17A1Q9UMD9 1497 aaPredicted RBP20.57■□□□□ 0.88
CAPRIN1-213ENST00000533562 KDM4FA0A1W2PPD8 638 aa20.57■□□□□ 0.88
CAPRIN1-213ENST00000533562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.57■□□□□ 0.88
CAPRIN1-213ENST00000533562 HNRNPUL2Q1KMD3 747 aaKnown RBP20.57■□□□□ 0.88
CAPRIN1-213ENST00000533562 MAGI3Q5TCQ9 1506 aa20.56■□□□□ 0.88
CAPRIN1-213ENST00000533562 KIF21BO75037 1637 aa20.54■□□□□ 0.88
CAPRIN1-213ENST00000533562 CFAP43Q8NDM7 1665 aa20.54■□□□□ 0.88
CAPRIN1-213ENST00000533562 UBTFP17480 764 aaKnown RBP20.53■□□□□ 0.88
CAPRIN1-213ENST00000533562 RAPGEF6Q8TEU7 1601 aa20.52■□□□□ 0.88
CAPRIN1-213ENST00000533562 FHOD3Q2V2M9 1422 aa20.51■□□□□ 0.87
CAPRIN1-213ENST00000533562 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
CAPRIN1-213ENST00000533562 PLEKHD1A6NEE1 506 aa20.47■□□□□ 0.87
CAPRIN1-213ENST00000533562 EFCAB5A4FU69 1503 aa20.47■□□□□ 0.87
CAPRIN1-213ENST00000533562 NUP153P49790 1475 aaKnown RBP20.46■□□□□ 0.87
CAPRIN1-213ENST00000533562 PHLDB1Q86UU1 1377 aa20.45■□□□□ 0.86
CAPRIN1-213ENST00000533562 ABCA9Q8IUA7 1624 aa20.41■□□□□ 0.86
CAPRIN1-213ENST00000533562 ARAP3Q8WWN8 1544 aa20.4■□□□□ 0.86
CAPRIN1-213ENST00000533562 ADGRL1O94910 1474 aa20.39■□□□□ 0.85
CAPRIN1-213ENST00000533562 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
CAPRIN1-213ENST00000533562 NEO1Q92859 1461 aa20.35■□□□□ 0.85
CAPRIN1-213ENST00000533562 FMN1Q68DA7 1419 aa20.35■□□□□ 0.85
CAPRIN1-213ENST00000533562 RAPGEF3O95398 923 aa20.33■□□□□ 0.85
CAPRIN1-213ENST00000533562 CDK11AQ9UQ88 783 aaPredicted RBP20.31■□□□□ 0.84
CAPRIN1-213ENST00000533562 ARHGAP35Q9NRY4 1499 aa20.3■□□□□ 0.84
CAPRIN1-213ENST00000533562 CDK13Q14004 1512 aaKnown RBP20.25■□□□□ 0.83
CAPRIN1-213ENST00000533562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.24■□□□□ 0.83
CAPRIN1-213ENST00000533562 AKNAQ7Z591 1439 aa20.24■□□□□ 0.83
CAPRIN1-213ENST00000533562 FANCAO15360 1455 aa20.23■□□□□ 0.83
CAPRIN1-213ENST00000533562 HECW1Q76N89 1606 aa20.22■□□□□ 0.83
CAPRIN1-213ENST00000533562 DENND4BO75064 1496 aaPredicted RBP20.22■□□□□ 0.83
CAPRIN1-213ENST00000533562 CFAP74Q9C0B2 1584 aa20.18■□□□□ 0.82
CAPRIN1-213ENST00000533562 ARID4BQ4LE39 1312 aaPredicted RBP20.18■□□□□ 0.82
CAPRIN1-213ENST00000533562 PLCH2O75038 1416 aa20.18■□□□□ 0.82
CAPRIN1-213ENST00000533562 TTC37Q6PGP7 1564 aa20.17■□□□□ 0.82
CAPRIN1-213ENST00000533562 EFCAB2Q5VUJ9 269 aa20.16■□□□□ 0.82
CAPRIN1-213ENST00000533562 FRMPD1Q5SYB0 1578 aa20.14■□□□□ 0.81
CAPRIN1-213ENST00000533562 CLIP1P30622 1438 aa20.13■□□□□ 0.81
CAPRIN1-213ENST00000533562 TROQ12816 1431 aaPredicted RBP20.13■□□□□ 0.81
CAPRIN1-213ENST00000533562 CASKIN1Q8WXD9 1431 aa20.11■□□□□ 0.81
CAPRIN1-213ENST00000533562 SCAPERQ9BY12 1400 aa20.11■□□□□ 0.81
CAPRIN1-213ENST00000533562 RICTORQ6R327 1708 aa20.1■□□□□ 0.81
CAPRIN1-213ENST00000533562 MAGI2Q86UL8 1455 aa20.08■□□□□ 0.81
CAPRIN1-213ENST00000533562 KIF14Q15058 1648 aa20.08■□□□□ 0.8
CAPRIN1-213ENST00000533562 CCDC18Q5T9S5 1454 aa20.07■□□□□ 0.8
CAPRIN1-213ENST00000533562 ARHGEF40Q8TER5 1519 aa20.06■□□□□ 0.8
CAPRIN1-213ENST00000533562 MYO5CQ9NQX4 1742 aa20.05■□□□□ 0.8
CAPRIN1-213ENST00000533562 ADAMTSL3P82987 1691 aa20.05■□□□□ 0.8
CAPRIN1-213ENST00000533562 ZMYM4Q5VZL5 1548 aa20.05■□□□□ 0.8
CAPRIN1-213ENST00000533562 PTPRMP28827 1452 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms