RNA–Protein interactions for RNA: ENST00000533559.5

FNTA-213, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-213ENST00000533559 CHMP7Q8WUX9 453 aaPredicted RBP12.33□□□□□ -0.44
FNTA-213ENST00000533559 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
FNTA-213ENST00000533559 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
FNTA-213ENST00000533559 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
FNTA-213ENST00000533559 ERCC6L2Q5T890 1561 aa12.28□□□□□ -0.44
FNTA-213ENST00000533559 HRCP23327 699 aa12.28□□□□□ -0.44
FNTA-213ENST00000533559 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
FNTA-213ENST00000533559 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.44
FNTA-213ENST00000533559 ADAMTS12P58397 1594 aa12.27□□□□□ -0.44
FNTA-213ENST00000533559 PCGF6Q9BYE7 350 aa12.27□□□□□ -0.45
FNTA-213ENST00000533559 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
FNTA-213ENST00000533559 CEP170Q5SW79 1584 aa12.25□□□□□ -0.45
FNTA-213ENST00000533559 GRIN2AQ12879 1464 aa12.24□□□□□ -0.45
FNTA-213ENST00000533559 EEA1Q15075 1411 aa12.23□□□□□ -0.45
FNTA-213ENST00000533559 KIF13AQ9H1H9 1805 aa12.23□□□□□ -0.45
FNTA-213ENST00000533559 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
FNTA-213ENST00000533559 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.45
FNTA-213ENST00000533559 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.46
FNTA-213ENST00000533559 NUP160Q12769 1436 aa12.18□□□□□ -0.46
FNTA-213ENST00000533559 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
FNTA-213ENST00000533559 ZEB1P37275 1124 aaPredicted RBP12.15□□□□□ -0.46
FNTA-213ENST00000533559 FAM9AQ8IZU1 332 aaPredicted RBP12.15□□□□□ -0.46
FNTA-213ENST00000533559 WRNQ14191 1432 aaPredicted RBP eCLIP12.14□□□□□ -0.47
FNTA-213ENST00000533559 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
FNTA-213ENST00000533559 FHAD1B1AJZ9 1412 aa12.12□□□□□ -0.47
FNTA-213ENST00000533559 RUSC2Q8N2Y8 1516 aa12.11□□□□□ -0.47
FNTA-213ENST00000533559 PRG4Q92954 1404 aaPredicted RBP12.06□□□□□ -0.48
FNTA-213ENST00000533559 DIP2BQ9P265 1576 aa12.05□□□□□ -0.48
FNTA-213ENST00000533559 ADCY10Q96PN6 1610 aa12.05□□□□□ -0.48
FNTA-213ENST00000533559 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
FNTA-213ENST00000533559 TSPOAP1O95153 1857 aa12.03□□□□□ -0.48
FNTA-213ENST00000533559 TNIKQ9UKE5 1360 aa12.03□□□□□ -0.48
FNTA-213ENST00000533559 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
FNTA-213ENST00000533559 ABCC10Q5T3U5 1492 aa12.02□□□□□ -0.49
FNTA-213ENST00000533559 KDM6BO15054 1643 aa12.01□□□□□ -0.49
FNTA-213ENST00000533559 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
FNTA-213ENST00000533559 GOLGA3Q08378 1498 aa11.99□□□□□ -0.49
FNTA-213ENST00000533559 CUL7Q14999 1698 aa11.97□□□□□ -0.49
FNTA-213ENST00000533559 JPH4Q96JJ6 628 aa11.97□□□□□ -0.49
FNTA-213ENST00000533559 FAM69CQ0P6D2 419 aa11.96□□□□□ -0.49
FNTA-213ENST00000533559 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
FNTA-213ENST00000533559 KIF21BO75037 1637 aa11.93□□□□□ -0.5
FNTA-213ENST00000533559 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
FNTA-213ENST00000533559 UBTFP17480 764 aaKnown RBP11.92□□□□□ -0.5
FNTA-213ENST00000533559 KIAA0586Q9BVV6 1533 aa11.91□□□□□ -0.5
FNTA-213ENST00000533559 PPRC1Q5VV67 1664 aaKnown RBP11.91□□□□□ -0.5
FNTA-213ENST00000533559 EHMT2Q96KQ7 1210 aa11.89□□□□□ -0.51
FNTA-213ENST00000533559 KIF27Q86VH2 1401 aa11.86□□□□□ -0.51
FNTA-213ENST00000533559 IQGAP2Q13576 1575 aa11.85□□□□□ -0.51
FNTA-213ENST00000533559 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
FNTA-213ENST00000533559 SLC4A1APQ9BWU0 796 aaKnown RBP11.84□□□□□ -0.51
FNTA-213ENST00000533559 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
FNTA-213ENST00000533559 IGF1RP08069 1367 aa11.83□□□□□ -0.52
FNTA-213ENST00000533559 GLI2P10070 1586 aa11.83□□□□□ -0.52
FNTA-213ENST00000533559 PTPRGP23470 1445 aa11.82□□□□□ -0.52
FNTA-213ENST00000533559 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
FNTA-213ENST00000533559 MAP3K4Q9Y6R4 1608 aa11.82□□□□□ -0.52
FNTA-213ENST00000533559 ASXL2Q76L83 1435 aa11.81□□□□□ -0.52
FNTA-213ENST00000533559 ADGRL1O94910 1474 aa11.81□□□□□ -0.52
FNTA-213ENST00000533559 ZCCHC11Q5TAX3 1644 aaKnown RBP11.8□□□□□ -0.52
FNTA-213ENST00000533559 APLP2Q06481 763 aa11.8□□□□□ -0.52
FNTA-213ENST00000533559 CARMIL2Q6F5E8 1435 aa11.79□□□□□ -0.52
FNTA-213ENST00000533559 PLB1Q6P1J6 1458 aa11.79□□□□□ -0.52
FNTA-213ENST00000533559 CLIP1P30622 1438 aa11.78□□□□□ -0.52
FNTA-213ENST00000533559 UHRF1BP1LA0JNW5 1464 aa11.77□□□□□ -0.52
FNTA-213ENST00000533559 CARMIL1Q5VZK9 1371 aa11.77□□□□□ -0.53
FNTA-213ENST00000533559 DISP1Q96F81 1524 aa11.76□□□□□ -0.53
FNTA-213ENST00000533559 EPRSP07814 1512 aaKnown RBP11.76□□□□□ -0.53
FNTA-213ENST00000533559 KIAA0556O60303 1618 aa11.75□□□□□ -0.53
FNTA-213ENST00000533559 VPS8Q8N3P4 1428 aa11.75□□□□□ -0.53
FNTA-213ENST00000533559 HECW2Q9P2P5 1572 aa11.75□□□□□ -0.53
FNTA-213ENST00000533559 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
FNTA-213ENST00000533559 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
FNTA-213ENST00000533559 PPARGC1BQ86YN6 1023 aaKnown RBP11.73□□□□□ -0.53
FNTA-213ENST00000533559 TEX14Q8IWB6 1497 aa11.73□□□□□ -0.53
FNTA-213ENST00000533559 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
FNTA-213ENST00000533559 UGGT2Q9NYU1 1516 aa11.72□□□□□ -0.53
FNTA-213ENST00000533559 PRXQ9BXM0 1461 aa11.72□□□□□ -0.53
FNTA-213ENST00000533559 COL17A1Q9UMD9 1497 aaPredicted RBP11.72□□□□□ -0.53
FNTA-213ENST00000533559 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
FNTA-213ENST00000533559 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
FNTA-213ENST00000533559 CFAP43Q8NDM7 1665 aa11.7□□□□□ -0.54
FNTA-213ENST00000533559 RAPGEF2Q9Y4G8 1499 aa11.7□□□□□ -0.54
FNTA-213ENST00000533559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.68□□□□□ -0.54
FNTA-213ENST00000533559 WDR7Q9Y4E6 1490 aa11.68□□□□□ -0.54
FNTA-213ENST00000533559 ABCA8O94911 1581 aa11.63□□□□□ -0.55
FNTA-213ENST00000533559 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
FNTA-213ENST00000533559 MAGI3Q5TCQ9 1506 aa11.61□□□□□ -0.55
FNTA-213ENST00000533559 CD109Q6YHK3 1445 aa11.59□□□□□ -0.55
FNTA-213ENST00000533559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.58□□□□□ -0.56
FNTA-213ENST00000533559 CLSPNQ9HAW4 1339 aa11.55□□□□□ -0.56
FNTA-213ENST00000533559 ABCA9Q8IUA7 1624 aa11.54□□□□□ -0.56
FNTA-213ENST00000533559 ADAMTSL3P82987 1691 aa11.53□□□□□ -0.56
FNTA-213ENST00000533559 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
FNTA-213ENST00000533559 MAP3K1Q13233 1512 aa11.53□□□□□ -0.56
FNTA-213ENST00000533559 ARAP3Q8WWN8 1544 aa11.53□□□□□ -0.56
FNTA-213ENST00000533559 RNF39Q9H2S5 420 aa11.52□□□□□ -0.57
FNTA-213ENST00000533559 FRMPD1Q5SYB0 1578 aa11.51□□□□□ -0.57
FNTA-213ENST00000533559 BCORL1Q5H9F3 1711 aa11.51□□□□□ -0.57
FNTA-213ENST00000533559 RAPGEF6Q8TEU7 1601 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms