RNA–Protein interactions for RNA: ENST00000533546.5

RELA-222, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-222ENST00000533546 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
RELA-222ENST00000533546 SHROOM2Q13796 1616 aa27.45■■□□□ 1.99
RELA-222ENST00000533546 KIAA0586Q9BVV6 1533 aa27.42■■□□□ 1.98
RELA-222ENST00000533546 PRG4Q92954 1404 aaPredicted RBP27.41■■□□□ 1.98
RELA-222ENST00000533546 RAPGEF2Q9Y4G8 1499 aa27.39■■□□□ 1.98
RELA-222ENST00000533546 CSRNP3Q8WYN3 585 aa27.32■■□□□ 1.96
RELA-222ENST00000533546 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
RELA-222ENST00000533546 FAM9AQ8IZU1 332 aaPredicted RBP27.26■■□□□ 1.95
RELA-222ENST00000533546 IQGAP2Q13576 1575 aa27.18■■□□□ 1.94
RELA-222ENST00000533546 EEA1Q15075 1411 aa27.17■■□□□ 1.94
RELA-222ENST00000533546 DISP1Q96F81 1524 aa27.11■■□□□ 1.93
RELA-222ENST00000533546 UGGT2Q9NYU1 1516 aa27.09■■□□□ 1.93
RELA-222ENST00000533546 TTBK1Q5TCY1 1321 aaPredicted RBP27.09■■□□□ 1.93
RELA-222ENST00000533546 CARMIL2Q6F5E8 1435 aa27.08■■□□□ 1.93
RELA-222ENST00000533546 TRHP20396 242 aaPredicted RBP27.08■■□□□ 1.93
RELA-222ENST00000533546 PTPRGP23470 1445 aa27.07■■□□□ 1.92
RELA-222ENST00000533546 TNIKQ9UKE5 1360 aa27.06■■□□□ 1.92
RELA-222ENST00000533546 CTTNBP2Q8WZ74 1663 aa27.01■■□□□ 1.91
RELA-222ENST00000533546 ADCY10Q96PN6 1610 aa26.96■■□□□ 1.91
RELA-222ENST00000533546 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
RELA-222ENST00000533546 EHMT2Q96KQ7 1210 aa26.94■■□□□ 1.9
RELA-222ENST00000533546 NPM1P06748 294 aaKnown RBP eCLIP26.91■■□□□ 1.9
RELA-222ENST00000533546 P3H3Q8IVL6 736 aa26.9■■□□□ 1.9
RELA-222ENST00000533546 KIF21BO75037 1637 aa26.9■■□□□ 1.9
RELA-222ENST00000533546 UACAQ9BZF9 1416 aa26.87■■□□□ 1.89
RELA-222ENST00000533546 GOLGA3Q08378 1498 aa26.87■■□□□ 1.89
RELA-222ENST00000533546 RANGAP1P46060 587 aaPredicted RBP26.85■■□□□ 1.89
RELA-222ENST00000533546 UHRF1BP1LA0JNW5 1464 aa26.83■■□□□ 1.89
RELA-222ENST00000533546 UBTFP17480 764 aaKnown RBP26.8■■□□□ 1.88
RELA-222ENST00000533546 PLB1Q6P1J6 1458 aa26.79■■□□□ 1.88
RELA-222ENST00000533546 ABCC2Q92887 1545 aa26.79■■□□□ 1.88
RELA-222ENST00000533546 MAPKBP1O60336 1514 aa26.77■■□□□ 1.88
RELA-222ENST00000533546 SAMD9Q5K651 1589 aa26.75■■□□□ 1.87
RELA-222ENST00000533546 FAM69CQ0P6D2 419 aa26.73■■□□□ 1.87
RELA-222ENST00000533546 ABCC10Q5T3U5 1492 aa26.72■■□□□ 1.87
RELA-222ENST00000533546 KDM5BQ9UGL1 1544 aa26.71■■□□□ 1.87
RELA-222ENST00000533546 ABCA8O94911 1581 aa26.7■■□□□ 1.86
RELA-222ENST00000533546 ASXL2Q76L83 1435 aa26.67■■□□□ 1.86
RELA-222ENST00000533546 KIF13AQ9H1H9 1805 aa26.67■■□□□ 1.86
RELA-222ENST00000533546 FHOD3Q2V2M9 1422 aa26.66■■□□□ 1.86
RELA-222ENST00000533546 DIP2BQ9P265 1576 aa26.63■■□□□ 1.85
RELA-222ENST00000533546 ZCCHC11Q5TAX3 1644 aaKnown RBP26.61■■□□□ 1.85
RELA-222ENST00000533546 ARID3CA6NKF2 412 aa26.6■■□□□ 1.85
RELA-222ENST00000533546 ATP10BO94823 1461 aa26.55■■□□□ 1.84
RELA-222ENST00000533546 EFCAB5A4FU69 1503 aa26.55■■□□□ 1.84
RELA-222ENST00000533546 ARHGAP35Q9NRY4 1499 aa26.55■■□□□ 1.84
RELA-222ENST00000533546 EPRSP07814 1512 aaKnown RBP26.5■■□□□ 1.83
RELA-222ENST00000533546 RAPGEF6Q8TEU7 1601 aa26.49■■□□□ 1.83
RELA-222ENST00000533546 KCNH8Q96L42 1107 aa26.48■■□□□ 1.83
RELA-222ENST00000533546 NUP153P49790 1475 aaKnown RBP26.48■■□□□ 1.83
RELA-222ENST00000533546 GLI2P10070 1586 aa26.47■■□□□ 1.83
RELA-222ENST00000533546 WDR7Q9Y4E6 1490 aa26.47■■□□□ 1.83
RELA-222ENST00000533546 LOC105371045A0A1W2PR82 267 aa26.41■■□□□ 1.82
RELA-222ENST00000533546 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.41■■□□□ 1.82
RELA-222ENST00000533546 HNRNPUL2Q1KMD3 747 aaKnown RBP26.41■■□□□ 1.82
RELA-222ENST00000533546 TSPOAP1O95153 1857 aa26.4■■□□□ 1.82
RELA-222ENST00000533546 FMN1Q68DA7 1419 aa26.36■■□□□ 1.81
RELA-222ENST00000533546 ATP1B4Q9UN42 357 aaPredicted RBP26.34■■□□□ 1.81
RELA-222ENST00000533546 PPRC1Q5VV67 1664 aaKnown RBP26.34■■□□□ 1.81
RELA-222ENST00000533546 MAP3K4Q9Y6R4 1608 aa26.32■■□□□ 1.8
RELA-222ENST00000533546 CLIP1P30622 1438 aa26.32■■□□□ 1.8
RELA-222ENST00000533546 PLEKHD1A6NEE1 506 aa26.29■■□□□ 1.8
RELA-222ENST00000533546 CD109Q6YHK3 1445 aa26.29■■□□□ 1.8
RELA-222ENST00000533546 CDK13Q14004 1512 aaKnown RBP26.28■■□□□ 1.8
RELA-222ENST00000533546 COL17A1Q9UMD9 1497 aaPredicted RBP26.23■■□□□ 1.79
RELA-222ENST00000533546 MAGI3Q5TCQ9 1506 aa26.21■■□□□ 1.79
RELA-222ENST00000533546 CASKIN1Q8WXD9 1431 aa26.2■■□□□ 1.78
RELA-222ENST00000533546 CFAP43Q8NDM7 1665 aa26.19■■□□□ 1.78
RELA-222ENST00000533546 CEP162Q5TB80 1403 aa26.19■■□□□ 1.78
RELA-222ENST00000533546 KDM6BO15054 1643 aa26.18■■□□□ 1.78
RELA-222ENST00000533546 HECW1Q76N89 1606 aa26.18■■□□□ 1.78
RELA-222ENST00000533546 TEX14Q8IWB6 1497 aa26.17■■□□□ 1.78
RELA-222ENST00000533546 ABCA9Q8IUA7 1624 aa26.16■■□□□ 1.78
RELA-222ENST00000533546 LRRIQ1Q96JM4 1722 aa26.14■■□□□ 1.78
RELA-222ENST00000533546 PCF11O94913 1555 aaKnown RBP26.14■■□□□ 1.78
RELA-222ENST00000533546 CDK11AQ9UQ88 783 aaPredicted RBP26.1■■□□□ 1.77
RELA-222ENST00000533546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.77
RELA-222ENST00000533546 FYCO1Q9BQS8 1478 aa26.06■■□□□ 1.76
RELA-222ENST00000533546 TROQ12816 1431 aaPredicted RBP26.04■■□□□ 1.76
RELA-222ENST00000533546 TTC37Q6PGP7 1564 aa26.03■■□□□ 1.76
RELA-222ENST00000533546 CCDC18Q5T9S5 1454 aa26.01■■□□□ 1.75
RELA-222ENST00000533546 ARAP3Q8WWN8 1544 aa25.99■■□□□ 1.75
RELA-222ENST00000533546 PHLDB1Q86UU1 1377 aa25.98■■□□□ 1.75
RELA-222ENST00000533546 KIF14Q15058 1648 aa25.98■■□□□ 1.75
RELA-222ENST00000533546 NEO1Q92859 1461 aa25.98■■□□□ 1.75
RELA-222ENST00000533546 RAPGEF3O95398 923 aa25.97■■□□□ 1.75
RELA-222ENST00000533546 PLCH2O75038 1416 aa25.97■■□□□ 1.75
RELA-222ENST00000533546 AKNAQ7Z591 1439 aa25.93■■□□□ 1.74
RELA-222ENST00000533546 FANCAO15360 1455 aa25.92■■□□□ 1.74
RELA-222ENST00000533546 EFCAB2Q5VUJ9 269 aa25.87■■□□□ 1.73
RELA-222ENST00000533546 VPS8Q8N3P4 1428 aa25.86■■□□□ 1.73
RELA-222ENST00000533546 KDM4FA0A1W2PPD8 638 aa25.85■■□□□ 1.73
RELA-222ENST00000533546 DENND4BO75064 1496 aaPredicted RBP25.82■■□□□ 1.72
RELA-222ENST00000533546 FRMPD1Q5SYB0 1578 aa25.81■■□□□ 1.72
RELA-222ENST00000533546 SCAPERQ9BY12 1400 aa25.8■■□□□ 1.72
RELA-222ENST00000533546 MTUS2Q5JR59 1369 aa25.8■■□□□ 1.72
RELA-222ENST00000533546 MYO5CQ9NQX4 1742 aa25.8■■□□□ 1.72
RELA-222ENST00000533546 CFAP74Q9C0B2 1584 aa25.78■■□□□ 1.72
RELA-222ENST00000533546 ADGRL1O94910 1474 aa25.77■■□□□ 1.72
RELA-222ENST00000533546 ARHGAP5Q13017 1502 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms