RNA–Protein interactions for RNA: ENST00000533506.5

LINC01588-205, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 1 (best)

Gene LINC01588, Length 1,316 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-205ENST00000533506 FAM163AQ96GL9 167 aaPredicted RBP14.26□□□□□ -0.13
LINC01588-205ENST00000533506 POTEJP0CG39 1038 aa14.25□□□□□ -0.13
LINC01588-205ENST00000533506 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
LINC01588-205ENST00000533506 PELP1Q8IZL8 1130 aaKnown RBP14.2□□□□□ -0.14
LINC01588-205ENST00000533506 CDAN1Q8IWY9 1227 aa14.16□□□□□ -0.14
LINC01588-205ENST00000533506 MAMSTRQ6ZN01 415 aa14.15□□□□□ -0.15
LINC01588-205ENST00000533506 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
LINC01588-205ENST00000533506 MKRN4PQ13434 485 aaPredicted RBP14.12□□□□□ -0.15
LINC01588-205ENST00000533506 NCAPD3P42695 1498 aa14.1□□□□□ -0.15
LINC01588-205ENST00000533506 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
LINC01588-205ENST00000533506 METRNQ9UJH8 293 aa14.09□□□□□ -0.15
LINC01588-205ENST00000533506 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
LINC01588-205ENST00000533506 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
LINC01588-205ENST00000533506 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
LINC01588-205ENST00000533506 CUX2O14529 1486 aa14.02□□□□□ -0.16
LINC01588-205ENST00000533506 ERCC6Q03468 1493 aa14.02□□□□□ -0.17
LINC01588-205ENST00000533506 C7P10643 843 aa13.99□□□□□ -0.17
LINC01588-205ENST00000533506 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
LINC01588-205ENST00000533506 MMRN1Q13201 1228 aa13.98□□□□□ -0.17
LINC01588-205ENST00000533506 SCUBE2Q9NQ36 999 aa13.98□□□□□ -0.17
LINC01588-205ENST00000533506 SLC39A7Q92504 469 aa13.97□□□□□ -0.17
LINC01588-205ENST00000533506 DNAJC5Q9H3Z4 198 aa13.97□□□□□ -0.17
LINC01588-205ENST00000533506 ASTLQ6HA08 431 aaPredicted RBP13.95□□□□□ -0.18
LINC01588-205ENST00000533506 PEG3Q9GZU2 1588 aa13.94□□□□□ -0.18
LINC01588-205ENST00000533506 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
LINC01588-205ENST00000533506 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
LINC01588-205ENST00000533506 NESP48681 1621 aa13.91□□□□□ -0.18
LINC01588-205ENST00000533506 ATMINO43313 823 aaPredicted RBP13.87□□□□□ -0.19
LINC01588-205ENST00000533506 SPNS2Q8IVW8 549 aa13.87□□□□□ -0.19
LINC01588-205ENST00000533506 MROH2BQ7Z745 1585 aa13.86□□□□□ -0.19
LINC01588-205ENST00000533506 THOC2Q8NI27 1593 aaKnown RBP13.86□□□□□ -0.19
LINC01588-205ENST00000533506 ATXN8OSP0DMR3 200 aa13.85□□□□□ -0.19
LINC01588-205ENST00000533506 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
LINC01588-205ENST00000533506 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
LINC01588-205ENST00000533506 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
LINC01588-205ENST00000533506 PAK3O75914 559 aaPredicted RBP13.76□□□□□ -0.21
LINC01588-205ENST00000533506 MS4A3Q96HJ5 214 aa13.71□□□□□ -0.21
LINC01588-205ENST00000533506 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.22
LINC01588-205ENST00000533506 WIZO95785 1651 aa13.7□□□□□ -0.22
LINC01588-205ENST00000533506 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
LINC01588-205ENST00000533506 ST18O60284 1047 aa13.65□□□□□ -0.22
LINC01588-205ENST00000533506 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
LINC01588-205ENST00000533506 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
LINC01588-205ENST00000533506 WDR62O43379 1518 aa13.63□□□□□ -0.23
LINC01588-205ENST00000533506 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
LINC01588-205ENST00000533506 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
LINC01588-205ENST00000533506 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
LINC01588-205ENST00000533506 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
LINC01588-205ENST00000533506 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
LINC01588-205ENST00000533506 CFTRP13569 1480 aa13.52□□□□□ -0.25
LINC01588-205ENST00000533506 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
LINC01588-205ENST00000533506 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
LINC01588-205ENST00000533506 ZBTB22O15209 634 aa13.48□□□□□ -0.25
LINC01588-205ENST00000533506 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
LINC01588-205ENST00000533506 COLQQ9Y215 455 aaPredicted RBP13.42□□□□□ -0.26
LINC01588-205ENST00000533506 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
LINC01588-205ENST00000533506 TMEM121BQ9BXQ6 578 aaPredicted RBP13.39□□□□□ -0.27
LINC01588-205ENST00000533506 BMP2KQ9NSY1 1161 aaPredicted RBP13.39□□□□□ -0.27
LINC01588-205ENST00000533506 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
LINC01588-205ENST00000533506 SLAIN1Q8ND83 568 aa13.39□□□□□ -0.27
LINC01588-205ENST00000533506 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
LINC01588-205ENST00000533506 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
LINC01588-205ENST00000533506 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.27
LINC01588-205ENST00000533506 SEC24BO95487 1268 aa13.31□□□□□ -0.28
LINC01588-205ENST00000533506 TRPC6Q9Y210 931 aa13.29□□□□□ -0.28
LINC01588-205ENST00000533506 IFT140Q96RY7 1462 aa13.28□□□□□ -0.28
LINC01588-205ENST00000533506 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
LINC01588-205ENST00000533506 ZNF608Q9ULD9 1512 aaPredicted RBP13.27□□□□□ -0.28
LINC01588-205ENST00000533506 EIF4G3O43432 1585 aaKnown RBP13.26□□□□□ -0.29
LINC01588-205ENST00000533506 DNMBPQ6XZF7 1577 aa13.26□□□□□ -0.29
LINC01588-205ENST00000533506 TIE1P35590 1138 aa13.25□□□□□ -0.29
LINC01588-205ENST00000533506 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
LINC01588-205ENST00000533506 KRTAP3-3Q9BYR6 98 aa13.22□□□□□ -0.29
LINC01588-205ENST00000533506 KRTAP3-2Q9BYR7 98 aa13.22□□□□□ -0.29
LINC01588-205ENST00000533506 RIMBP3CA6NJZ7 1639 aa13.22□□□□□ -0.29
LINC01588-205ENST00000533506 RIMBP3BA6NNM3 1639 aa13.22□□□□□ -0.29
LINC01588-205ENST00000533506 RIMBP3Q9UFD9 1639 aa13.22□□□□□ -0.29
LINC01588-205ENST00000533506 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
LINC01588-205ENST00000533506 KIF12Q96FN5 646 aa13.21□□□□□ -0.29
LINC01588-205ENST00000533506 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
LINC01588-205ENST00000533506 TARBP1Q13395 1621 aaKnown RBP13.2□□□□□ -0.3
LINC01588-205ENST00000533506 CHD1O14646 1710 aa13.17□□□□□ -0.3
LINC01588-205ENST00000533506 ARHGEF11O15085 1522 aa13.16□□□□□ -0.3
LINC01588-205ENST00000533506 IER5LQ5T953 404 aa13.15□□□□□ -0.3
LINC01588-205ENST00000533506 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
LINC01588-205ENST00000533506 TTLL13PA6NNM8 815 aa13.13□□□□□ -0.31
LINC01588-205ENST00000533506 TSPYL2Q9H2G4 693 aaPredicted RBP13.13□□□□□ -0.31
LINC01588-205ENST00000533506 AQRO60306 1485 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC01588-205ENST00000533506 SNPHO15079 494 aa13.11□□□□□ -0.31
LINC01588-205ENST00000533506 WDR97A6NE52 1622 aa13.08□□□□□ -0.32
LINC01588-205ENST00000533506 RAD54L2Q9Y4B4 1467 aa13.07□□□□□ -0.32
LINC01588-205ENST00000533506 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
LINC01588-205ENST00000533506 POTEB3A0JP26 581 aa13.05□□□□□ -0.32
LINC01588-205ENST00000533506 POTEBQ6S5H4 581 aa13.05□□□□□ -0.32
LINC01588-205ENST00000533506 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
LINC01588-205ENST00000533506 MAP3K13O43283 966 aa13.04□□□□□ -0.32
LINC01588-205ENST00000533506 CUX1P39880 1505 aa13.03□□□□□ -0.32
LINC01588-205ENST00000533506 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
LINC01588-205ENST00000533506 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
LINC01588-205ENST00000533506 SOGA1O94964 1423 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms