RNA–Protein interactions for RNA: ENST00000533491.1

CSF3R-215, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 5

Gene CSF3R, Length 512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-215ENST00000533491 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
CSF3R-215ENST00000533491 NUP160Q12769 1436 aa21.96■■□□□ 1.11
CSF3R-215ENST00000533491 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
CSF3R-215ENST00000533491 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.1
CSF3R-215ENST00000533491 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
CSF3R-215ENST00000533491 IQGAP2Q13576 1575 aa21.9■■□□□ 1.1
CSF3R-215ENST00000533491 CLIP1P30622 1438 aa21.89■■□□□ 1.09
CSF3R-215ENST00000533491 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.08
CSF3R-215ENST00000533491 UGGT2Q9NYU1 1516 aa21.8■■□□□ 1.08
CSF3R-215ENST00000533491 CLASP1Q7Z460 1538 aa21.8■■□□□ 1.08
CSF3R-215ENST00000533491 JPH4Q96JJ6 628 aa21.78■■□□□ 1.08
CSF3R-215ENST00000533491 SAMD9Q5K651 1589 aa21.78■■□□□ 1.08
CSF3R-215ENST00000533491 P3H3Q8IVL6 736 aa21.77■■□□□ 1.08
CSF3R-215ENST00000533491 ARAP1Q96P48 1450 aa21.77■■□□□ 1.07
CSF3R-215ENST00000533491 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
CSF3R-215ENST00000533491 EFCAB5A4FU69 1503 aa21.75■■□□□ 1.07
CSF3R-215ENST00000533491 SHROOM2Q13796 1616 aa21.74■■□□□ 1.07
CSF3R-215ENST00000533491 DISP1Q96F81 1524 aa21.73■■□□□ 1.07
CSF3R-215ENST00000533491 FHOD3Q2V2M9 1422 aa21.7■■□□□ 1.06
CSF3R-215ENST00000533491 KIAA0556O60303 1618 aa21.69■■□□□ 1.06
CSF3R-215ENST00000533491 PRG4Q92954 1404 aaPredicted RBP21.66■■□□□ 1.06
CSF3R-215ENST00000533491 ERCC6L2Q5T890 1561 aa21.65■■□□□ 1.06
CSF3R-215ENST00000533491 VPS8Q8N3P4 1428 aa21.63■■□□□ 1.05
CSF3R-215ENST00000533491 CARMIL2Q6F5E8 1435 aa21.62■■□□□ 1.05
CSF3R-215ENST00000533491 TTBK1Q5TCY1 1321 aaPredicted RBP21.55■■□□□ 1.04
CSF3R-215ENST00000533491 FMN1Q68DA7 1419 aa21.54■■□□□ 1.04
CSF3R-215ENST00000533491 PCF11O94913 1555 aaKnown RBP21.53■■□□□ 1.04
CSF3R-215ENST00000533491 CASKIN1Q8WXD9 1431 aa21.48■■□□□ 1.03
CSF3R-215ENST00000533491 PTPRGP23470 1445 aa21.47■■□□□ 1.03
CSF3R-215ENST00000533491 LRRIQ1Q96JM4 1722 aa21.47■■□□□ 1.03
CSF3R-215ENST00000533491 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.02
CSF3R-215ENST00000533491 ATP1B4Q9UN42 357 aaPredicted RBP21.44■■□□□ 1.02
CSF3R-215ENST00000533491 PLB1Q6P1J6 1458 aa21.44■■□□□ 1.02
CSF3R-215ENST00000533491 RAPGEF6Q8TEU7 1601 aa21.44■■□□□ 1.02
CSF3R-215ENST00000533491 ABCA8O94911 1581 aa21.43■■□□□ 1.02
CSF3R-215ENST00000533491 ARHGEF11O15085 1522 aa21.4■■□□□ 1.02
CSF3R-215ENST00000533491 PPARGC1BQ86YN6 1023 aaKnown RBP21.39■■□□□ 1.01
CSF3R-215ENST00000533491 HECW1Q76N89 1606 aa21.38■■□□□ 1.01
CSF3R-215ENST00000533491 NUP153P49790 1475 aaKnown RBP21.37■■□□□ 1.01
CSF3R-215ENST00000533491 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
CSF3R-215ENST00000533491 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
CSF3R-215ENST00000533491 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
CSF3R-215ENST00000533491 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
CSF3R-215ENST00000533491 CFAP43Q8NDM7 1665 aa21.34■■□□□ 1.01
CSF3R-215ENST00000533491 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
CSF3R-215ENST00000533491 APLP2Q06481 763 aa21.34■■□□□ 1.01
CSF3R-215ENST00000533491 UACAQ9BZF9 1416 aa21.34■■□□□ 1.01
CSF3R-215ENST00000533491 EPRSP07814 1512 aaKnown RBP21.34■■□□□ 1.01
CSF3R-215ENST00000533491 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
CSF3R-215ENST00000533491 KANK4Q5T7N3 995 aaPredicted RBP21.32■■□□□ 1
CSF3R-215ENST00000533491 CDK13Q14004 1512 aaKnown RBP21.32■■□□□ 1
CSF3R-215ENST00000533491 ABCC2Q92887 1545 aa21.29■■□□□ 1
CSF3R-215ENST00000533491 CCDC18Q5T9S5 1454 aa21.28■■□□□ 1
CSF3R-215ENST00000533491 ADCY10Q96PN6 1610 aa21.28■■□□□ 1
CSF3R-215ENST00000533491 UHRF1BP1LA0JNW5 1464 aa21.27■■□□□ 1
CSF3R-215ENST00000533491 ATP10BO94823 1461 aa21.27■■□□□ 1
CSF3R-215ENST00000533491 LRRC9Q6ZRR7 1453 aa21.25■□□□□ 0.99
CSF3R-215ENST00000533491 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
CSF3R-215ENST00000533491 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
CSF3R-215ENST00000533491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.2■□□□□ 0.98
CSF3R-215ENST00000533491 HNRNPUL2Q1KMD3 747 aaKnown RBP21.2■□□□□ 0.98
CSF3R-215ENST00000533491 ZCCHC11Q5TAX3 1644 aaKnown RBP21.19■□□□□ 0.98
CSF3R-215ENST00000533491 KDM5BQ9UGL1 1544 aa21.19■□□□□ 0.98
CSF3R-215ENST00000533491 MTUS2Q5JR59 1369 aa21.16■□□□□ 0.98
CSF3R-215ENST00000533491 EHBP1L1Q8N3D4 1523 aa21.14■□□□□ 0.97
CSF3R-215ENST00000533491 CDK11AQ9UQ88 783 aaPredicted RBP21.11■□□□□ 0.97
CSF3R-215ENST00000533491 PLEKHD1A6NEE1 506 aa21.1■□□□□ 0.97
CSF3R-215ENST00000533491 TROQ12816 1431 aaPredicted RBP21.1■□□□□ 0.97
CSF3R-215ENST00000533491 SUPT6HQ7KZ85 1726 aaKnown RBP21.09■□□□□ 0.97
CSF3R-215ENST00000533491 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
CSF3R-215ENST00000533491 KIF14Q15058 1648 aa21.07■□□□□ 0.96
CSF3R-215ENST00000533491 NCOA2Q15596 1464 aa21.06■□□□□ 0.96
CSF3R-215ENST00000533491 NPM1P06748 294 aaKnown RBP eCLIP21.04■□□□□ 0.96
CSF3R-215ENST00000533491 PHLDB1Q86UU1 1377 aa21.04■□□□□ 0.96
CSF3R-215ENST00000533491 TRIM26Q12899 539 aaPredicted RBP21■□□□□ 0.95
CSF3R-215ENST00000533491 ASXL2Q76L83 1435 aa21■□□□□ 0.95
CSF3R-215ENST00000533491 KCNH8Q96L42 1107 aa20.98■□□□□ 0.95
CSF3R-215ENST00000533491 WDR7Q9Y4E6 1490 aa20.98■□□□□ 0.95
CSF3R-215ENST00000533491 ABCC10Q5T3U5 1492 aa20.97■□□□□ 0.95
CSF3R-215ENST00000533491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.94■□□□□ 0.94
CSF3R-215ENST00000533491 CDC42BPAQ5VT25 1732 aa20.94■□□□□ 0.94
CSF3R-215ENST00000533491 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
CSF3R-215ENST00000533491 MYOM3Q5VTT5 1437 aa20.93■□□□□ 0.94
CSF3R-215ENST00000533491 TTC37Q6PGP7 1564 aa20.93■□□□□ 0.94
CSF3R-215ENST00000533491 RRBP1Q9P2E9 1410 aaKnown RBP20.92■□□□□ 0.94
CSF3R-215ENST00000533491 CCNB3Q8WWL7 1395 aa20.91■□□□□ 0.94
CSF3R-215ENST00000533491 GPATCH8Q9UKJ3 1502 aaKnown RBP20.91■□□□□ 0.94
CSF3R-215ENST00000533491 FGD6Q6ZV73 1430 aa20.9■□□□□ 0.94
CSF3R-215ENST00000533491 PCGF6Q9BYE7 350 aa20.89■□□□□ 0.93
CSF3R-215ENST00000533491 CDC42BPBQ9Y5S2 1711 aa20.88■□□□□ 0.93
CSF3R-215ENST00000533491 ITSN2Q9NZM3 1697 aa20.88■□□□□ 0.93
CSF3R-215ENST00000533491 MYO5CQ9NQX4 1742 aa20.87■□□□□ 0.93
CSF3R-215ENST00000533491 ABCA9Q8IUA7 1624 aa20.86■□□□□ 0.93
CSF3R-215ENST00000533491 PTPN23Q9H3S7 1636 aa20.86■□□□□ 0.93
CSF3R-215ENST00000533491 PREX2Q70Z35 1606 aa20.85■□□□□ 0.93
CSF3R-215ENST00000533491 MIA2Q96PC5 1412 aa20.84■□□□□ 0.93
CSF3R-215ENST00000533491 CFDP1Q9UEE9 299 aaPredicted RBP20.82■□□□□ 0.92
CSF3R-215ENST00000533491 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
CSF3R-215ENST00000533491 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
CSF3R-215ENST00000533491 TCOF1Q13428 1488 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms