RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 CYB5RLQ6IPT4 315 aa11.66□□□□□ -0.54
SOX6-215ENST00000533411 CEP170Q5SW79 1584 aa11.66□□□□□ -0.54
SOX6-215ENST00000533411 FHAD1B1AJZ9 1412 aa11.65□□□□□ -0.54
SOX6-215ENST00000533411 NUP160Q12769 1436 aa11.62□□□□□ -0.55
SOX6-215ENST00000533411 ERCC6L2Q5T890 1561 aa11.61□□□□□ -0.55
SOX6-215ENST00000533411 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
SOX6-215ENST00000533411 SHROOM2Q13796 1616 aa11.57□□□□□ -0.56
SOX6-215ENST00000533411 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
SOX6-215ENST00000533411 IGF1RP08069 1367 aa11.56□□□□□ -0.56
SOX6-215ENST00000533411 CUL7Q14999 1698 aa11.55□□□□□ -0.56
SOX6-215ENST00000533411 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
SOX6-215ENST00000533411 PRG4Q92954 1404 aaPredicted RBP11.51□□□□□ -0.57
SOX6-215ENST00000533411 CARMIL1Q5VZK9 1371 aa11.49□□□□□ -0.57
SOX6-215ENST00000533411 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
SOX6-215ENST00000533411 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
SOX6-215ENST00000533411 KIAA0586Q9BVV6 1533 aa11.46□□□□□ -0.57
SOX6-215ENST00000533411 DMRT2Q9Y5R5 561 aa11.45□□□□□ -0.58
SOX6-215ENST00000533411 EEA1Q15075 1411 aa11.42□□□□□ -0.58
SOX6-215ENST00000533411 SCAF1Q9H7N4 1312 aaKnown RBP11.41□□□□□ -0.58
SOX6-215ENST00000533411 RAPGEF2Q9Y4G8 1499 aa11.41□□□□□ -0.58
SOX6-215ENST00000533411 IQGAP2Q13576 1575 aa11.41□□□□□ -0.58
SOX6-215ENST00000533411 ADCY10Q96PN6 1610 aa11.38□□□□□ -0.59
SOX6-215ENST00000533411 CTTNBP2Q8WZ74 1663 aa11.36□□□□□ -0.59
SOX6-215ENST00000533411 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
SOX6-215ENST00000533411 FAM9AQ8IZU1 332 aaPredicted RBP11.34□□□□□ -0.59
SOX6-215ENST00000533411 KIF13AQ9H1H9 1805 aa11.34□□□□□ -0.59
SOX6-215ENST00000533411 DISP1Q96F81 1524 aa11.34□□□□□ -0.59
SOX6-215ENST00000533411 CARMIL2Q6F5E8 1435 aa11.34□□□□□ -0.59
SOX6-215ENST00000533411 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
SOX6-215ENST00000533411 UGGT2Q9NYU1 1516 aa11.32□□□□□ -0.6
SOX6-215ENST00000533411 PTPRGP23470 1445 aa11.32□□□□□ -0.6
SOX6-215ENST00000533411 KIAA0556O60303 1618 aa11.31□□□□□ -0.6
SOX6-215ENST00000533411 TNIKQ9UKE5 1360 aa11.31□□□□□ -0.6
SOX6-215ENST00000533411 KIF21BO75037 1637 aa11.3□□□□□ -0.6
SOX6-215ENST00000533411 LOC105371045A0A1W2PR82 267 aa11.29□□□□□ -0.6
SOX6-215ENST00000533411 MAPKBP1O60336 1514 aa11.29□□□□□ -0.6
SOX6-215ENST00000533411 DCAF8L1A6NGE4 600 aa11.28□□□□□ -0.6
SOX6-215ENST00000533411 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
SOX6-215ENST00000533411 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
SOX6-215ENST00000533411 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
SOX6-215ENST00000533411 DIP2BQ9P265 1576 aa11.27□□□□□ -0.61
SOX6-215ENST00000533411 GOLGA3Q08378 1498 aa11.25□□□□□ -0.61
SOX6-215ENST00000533411 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
SOX6-215ENST00000533411 ABCC2Q92887 1545 aa11.25□□□□□ -0.61
SOX6-215ENST00000533411 UACAQ9BZF9 1416 aa11.25□□□□□ -0.61
SOX6-215ENST00000533411 FAM69CQ0P6D2 419 aa11.24□□□□□ -0.61
SOX6-215ENST00000533411 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
SOX6-215ENST00000533411 TSPOAP1O95153 1857 aa11.23□□□□□ -0.61
SOX6-215ENST00000533411 ZCCHC11Q5TAX3 1644 aaKnown RBP11.22□□□□□ -0.61
SOX6-215ENST00000533411 PLB1Q6P1J6 1458 aa11.21□□□□□ -0.61
SOX6-215ENST00000533411 ASXL2Q76L83 1435 aa11.2□□□□□ -0.62
SOX6-215ENST00000533411 KDM5BQ9UGL1 1544 aa11.19□□□□□ -0.62
SOX6-215ENST00000533411 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
SOX6-215ENST00000533411 ABCA8O94911 1581 aa11.19□□□□□ -0.62
SOX6-215ENST00000533411 SAMD9Q5K651 1589 aa11.18□□□□□ -0.62
SOX6-215ENST00000533411 RANGAP1P46060 587 aaPredicted RBP11.17□□□□□ -0.62
SOX6-215ENST00000533411 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
SOX6-215ENST00000533411 PPRC1Q5VV67 1664 aaKnown RBP11.16□□□□□ -0.62
SOX6-215ENST00000533411 CEP162Q5TB80 1403 aa11.15□□□□□ -0.62
SOX6-215ENST00000533411 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
SOX6-215ENST00000533411 GLI2P10070 1586 aa11.14□□□□□ -0.63
SOX6-215ENST00000533411 ARID3CA6NKF2 412 aa11.13□□□□□ -0.63
SOX6-215ENST00000533411 KDM6BO15054 1643 aa11.13□□□□□ -0.63
SOX6-215ENST00000533411 FHOD3Q2V2M9 1422 aa11.12□□□□□ -0.63
SOX6-215ENST00000533411 MAP3K4Q9Y6R4 1608 aa11.12□□□□□ -0.63
SOX6-215ENST00000533411 WDR7Q9Y4E6 1490 aa11.12□□□□□ -0.63
SOX6-215ENST00000533411 RAPGEF6Q8TEU7 1601 aa11.11□□□□□ -0.63
SOX6-215ENST00000533411 ATP10BO94823 1461 aa11.08□□□□□ -0.64
SOX6-215ENST00000533411 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
SOX6-215ENST00000533411 KCNH8Q96L42 1107 aa11.07□□□□□ -0.64
SOX6-215ENST00000533411 EFCAB5A4FU69 1503 aa11.07□□□□□ -0.64
SOX6-215ENST00000533411 NUP153P49790 1475 aaKnown RBP11.06□□□□□ -0.64
SOX6-215ENST00000533411 CFAP43Q8NDM7 1665 aa11.06□□□□□ -0.64
SOX6-215ENST00000533411 CLIP1P30622 1438 aa11.04□□□□□ -0.64
SOX6-215ENST00000533411 COL17A1Q9UMD9 1497 aaPredicted RBP11.04□□□□□ -0.64
SOX6-215ENST00000533411 TEX14Q8IWB6 1497 aa11.03□□□□□ -0.64
SOX6-215ENST00000533411 CD109Q6YHK3 1445 aa11.02□□□□□ -0.64
SOX6-215ENST00000533411 ARHGAP35Q9NRY4 1499 aa11.02□□□□□ -0.65
SOX6-215ENST00000533411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
SOX6-215ENST00000533411 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
SOX6-215ENST00000533411 PPP4R3CPQ6ZMV5 832 aa11.02□□□□□ -0.65
SOX6-215ENST00000533411 MAGI3Q5TCQ9 1506 aa11□□□□□ -0.65
SOX6-215ENST00000533411 ABCA9Q8IUA7 1624 aa11□□□□□ -0.65
SOX6-215ENST00000533411 CDK13Q14004 1512 aaKnown RBP10.99□□□□□ -0.65
SOX6-215ENST00000533411 VPS8Q8N3P4 1428 aa10.97□□□□□ -0.65
SOX6-215ENST00000533411 HECW1Q76N89 1606 aa10.97□□□□□ -0.65
SOX6-215ENST00000533411 LRRIQ1Q96JM4 1722 aa10.96□□□□□ -0.65
SOX6-215ENST00000533411 FMN1Q68DA7 1419 aa10.95□□□□□ -0.66
SOX6-215ENST00000533411 ATP1B4Q9UN42 357 aaPredicted RBP10.95□□□□□ -0.66
SOX6-215ENST00000533411 TTC37Q6PGP7 1564 aa10.94□□□□□ -0.66
SOX6-215ENST00000533411 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.94□□□□□ -0.66
SOX6-215ENST00000533411 PLEKHD1A6NEE1 506 aa10.93□□□□□ -0.66
SOX6-215ENST00000533411 PCF11O94913 1555 aaKnown RBP10.93□□□□□ -0.66
SOX6-215ENST00000533411 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
SOX6-215ENST00000533411 TRIM26Q12899 539 aaPredicted RBP10.92□□□□□ -0.66
SOX6-215ENST00000533411 ARAP3Q8WWN8 1544 aa10.91□□□□□ -0.66
SOX6-215ENST00000533411 PCGF6Q9BYE7 350 aa10.9□□□□□ -0.66
SOX6-215ENST00000533411 KIF14Q15058 1648 aa10.9□□□□□ -0.66
SOX6-215ENST00000533411 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.67
SOX6-215ENST00000533411 ADGRL1O94910 1474 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms