RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 STAG3Q9UJ98 1225 aa10.45□□□□□ -0.74
CSRP1-218ENST00000533402 IRX6P78412 446 aaPredicted RBP10.43□□□□□ -0.74
CSRP1-218ENST00000533402 ABCC8Q09428 1581 aa10.43□□□□□ -0.74
CSRP1-218ENST00000533402 VSIG10Q8N0Z9 540 aa10.43□□□□□ -0.74
CSRP1-218ENST00000533402 LAS1LQ9Y4W2 734 aaKnown RBP10.43□□□□□ -0.74
CSRP1-218ENST00000533402 BECN1Q14457 450 aa10.42□□□□□ -0.74
CSRP1-218ENST00000533402 ZNF326Q5BKZ1 582 aaKnown RBP10.42□□□□□ -0.74
CSRP1-218ENST00000533402 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
CSRP1-218ENST00000533402 ARID4BQ4LE39 1312 aaPredicted RBP10.41□□□□□ -0.74
CSRP1-218ENST00000533402 WRNQ14191 1432 aaPredicted RBP eCLIP10.4□□□□□ -0.74
CSRP1-218ENST00000533402 PDS5BQ9NTI5 1447 aa10.4□□□□□ -0.74
CSRP1-218ENST00000533402 PTMAP06454 111 aaKnown RBP10.4□□□□□ -0.75
CSRP1-218ENST00000533402 SUPT16HQ9Y5B9 1047 aaKnown RBP10.39□□□□□ -0.75
CSRP1-218ENST00000533402 PODXL2Q9NZ53 605 aa10.39□□□□□ -0.75
CSRP1-218ENST00000533402 GOLGA3Q08378 1498 aa10.38□□□□□ -0.75
CSRP1-218ENST00000533402 CEP164Q9UPV0 1460 aa10.37□□□□□ -0.75
CSRP1-218ENST00000533402 HSP90AA2PQ14568 343 aaPredicted RBP10.37□□□□□ -0.75
CSRP1-218ENST00000533402 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
CSRP1-218ENST00000533402 PKNOX2Q96KN3 472 aa10.36□□□□□ -0.75
CSRP1-218ENST00000533402 GOLGA6L22H0YM25 854 aa10.36□□□□□ -0.75
CSRP1-218ENST00000533402 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
CSRP1-218ENST00000533402 FAM50AQ14320 339 aaKnown RBP10.36□□□□□ -0.75
CSRP1-218ENST00000533402 FAM9BQ8IZU0 186 aa10.35□□□□□ -0.75
CSRP1-218ENST00000533402 TNNT3P45378 269 aaPredicted RBP10.35□□□□□ -0.75
CSRP1-218ENST00000533402 RSPH6AQ9H0K4 717 aa10.35□□□□□ -0.75
CSRP1-218ENST00000533402 DDX10Q13206 875 aaKnown RBP10.34□□□□□ -0.75
CSRP1-218ENST00000533402 PNNQ9H307 717 aaKnown RBP10.34□□□□□ -0.75
CSRP1-218ENST00000533402 L1TD1Q5T7N2 865 aaKnown RBP10.34□□□□□ -0.75
CSRP1-218ENST00000533402 A0A0U1RQG5 324 aaPredicted RBP10.33□□□□□ -0.76
CSRP1-218ENST00000533402 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.32□□□□□ -0.76
CSRP1-218ENST00000533402 MSNP26038 577 aaKnown RBP10.31□□□□□ -0.76
CSRP1-218ENST00000533402 MROH2BQ7Z745 1585 aa10.29□□□□□ -0.76
CSRP1-218ENST00000533402 ARID3AQ99856 593 aa10.29□□□□□ -0.76
CSRP1-218ENST00000533402 HMGXB3Q12766 1538 aa10.29□□□□□ -0.76
CSRP1-218ENST00000533402 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
CSRP1-218ENST00000533402 CHAF1AQ13111 956 aaPredicted RBP10.28□□□□□ -0.76
CSRP1-218ENST00000533402 WIZO95785 1651 aa10.26□□□□□ -0.77
CSRP1-218ENST00000533402 TSHZ2Q9NRE2 1034 aa10.25□□□□□ -0.77
CSRP1-218ENST00000533402 ATAD2BQ9ULI0 1458 aa10.25□□□□□ -0.77
CSRP1-218ENST00000533402 CECR2Q9BXF3 1484 aa10.25□□□□□ -0.77
CSRP1-218ENST00000533402 PPP4R2Q9NY27 417 aa10.24□□□□□ -0.77
CSRP1-218ENST00000533402 CLIP1P30622 1438 aa10.23□□□□□ -0.77
CSRP1-218ENST00000533402 SALL2Q9Y467 1007 aaPredicted RBP10.23□□□□□ -0.77
CSRP1-218ENST00000533402 CCDC88BA6NC98 1476 aa10.22□□□□□ -0.77
CSRP1-218ENST00000533402 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
CSRP1-218ENST00000533402 PTMSP20962 102 aa10.22□□□□□ -0.77
CSRP1-218ENST00000533402 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
CSRP1-218ENST00000533402 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
CSRP1-218ENST00000533402 NCAPD3P42695 1498 aa10.21□□□□□ -0.77
CSRP1-218ENST00000533402 EIF4G1Q04637 1599 aaKnown RBP10.21□□□□□ -0.77
CSRP1-218ENST00000533402 TNIKQ9UKE5 1360 aa10.21□□□□□ -0.77
CSRP1-218ENST00000533402 ANO8Q9HCE9 1232 aaPredicted RBP10.2□□□□□ -0.78
CSRP1-218ENST00000533402 MRS2Q9HD23 443 aa10.2□□□□□ -0.78
CSRP1-218ENST00000533402 CADPSQ9ULU8 1353 aa10.2□□□□□ -0.78
CSRP1-218ENST00000533402 C14orf37Q86TY3 774 aa10.2□□□□□ -0.78
CSRP1-218ENST00000533402 PLPPR3Q6T4P5 718 aa10.19□□□□□ -0.78
CSRP1-218ENST00000533402 TMC1Q8TDI8 760 aa10.19□□□□□ -0.78
CSRP1-218ENST00000533402 UNC13AQ9UPW8 1703 aa10.19□□□□□ -0.78
CSRP1-218ENST00000533402 PLCB2Q00722 1185 aa10.16□□□□□ -0.78
CSRP1-218ENST00000533402 A0A0G2JS52 829 aa10.16□□□□□ -0.78
CSRP1-218ENST00000533402 MTUS2Q5JR59 1369 aa10.15□□□□□ -0.79
CSRP1-218ENST00000533402 TONSLQ96HA7 1378 aa10.14□□□□□ -0.79
CSRP1-218ENST00000533402 APPP05067 770 aa10.14□□□□□ -0.79
CSRP1-218ENST00000533402 CARMIL2Q6F5E8 1435 aa10.14□□□□□ -0.79
CSRP1-218ENST00000533402 B4GALNT3Q6L9W6 998 aa10.14□□□□□ -0.79
CSRP1-218ENST00000533402 CALRP27797 417 aaKnown RBP10.14□□□□□ -0.79
CSRP1-218ENST00000533402 PPP1R15AO75807 674 aaPredicted RBP10.13□□□□□ -0.79
CSRP1-218ENST00000533402 PEG3Q9GZU2 1588 aa10.13□□□□□ -0.79
CSRP1-218ENST00000533402 ZRSR1Q15695 479 aaKnown RBP10.12□□□□□ -0.79
CSRP1-218ENST00000533402 CHGAP10645 457 aaKnown RBP10.12□□□□□ -0.79
CSRP1-218ENST00000533402 FMN1Q68DA7 1419 aa10.12□□□□□ -0.79
CSRP1-218ENST00000533402 GOLGA6L6A8MZA4 724 aa10.11□□□□□ -0.79
CSRP1-218ENST00000533402 CEP162Q5TB80 1403 aa10.1□□□□□ -0.79
CSRP1-218ENST00000533402 CUX2O14529 1486 aa10.1□□□□□ -0.79
CSRP1-218ENST00000533402 USP35Q9P2H5 1018 aa10.1□□□□□ -0.79
CSRP1-218ENST00000533402 NRDCO43847 1150 aa10.09□□□□□ -0.79
CSRP1-218ENST00000533402 ZNF777Q9ULD5 760 aaPredicted RBP10.09□□□□□ -0.79
CSRP1-218ENST00000533402 KIAA2012Q0VF49 1180 aa10.09□□□□□ -0.79
CSRP1-218ENST00000533402 GOLGA6L3A6NEY3 463 aa10.09□□□□□ -0.79
CSRP1-218ENST00000533402 TPRNQ4KMQ1 711 aa10.09□□□□□ -0.79
CSRP1-218ENST00000533402 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
CSRP1-218ENST00000533402 ZBTB7CA1YPR0 619 aa10.09□□□□□ -0.79
CSRP1-218ENST00000533402 GZF1Q9H116 711 aaPredicted RBP10.07□□□□□ -0.8
CSRP1-218ENST00000533402 CARMIL1Q5VZK9 1371 aa10.07□□□□□ -0.8
CSRP1-218ENST00000533402 HSP90AB1P08238 724 aaKnown RBP10.07□□□□□ -0.8
CSRP1-218ENST00000533402 MYH16Q9H6N6 1097 aa10.06□□□□□ -0.8
CSRP1-218ENST00000533402 LAMC3Q9Y6N6 1575 aa10.06□□□□□ -0.8
CSRP1-218ENST00000533402 NPHP1O15259 732 aa10.06□□□□□ -0.8
CSRP1-218ENST00000533402 EIF4G2P78344 907 aaKnown RBP eCLIP10.06□□□□□ -0.8
CSRP1-218ENST00000533402 WDR43Q15061 677 aaKnown RBP eCLIP10.06□□□□□ -0.8
CSRP1-218ENST00000533402 FANCD2Q9BXW9 1451 aa10.06□□□□□ -0.8
CSRP1-218ENST00000533402 RGS3P49796 1198 aa10.06□□□□□ -0.8
CSRP1-218ENST00000533402 SOGA1O94964 1423 aa10.06□□□□□ -0.8
CSRP1-218ENST00000533402 TSPY4P0CV99 314 aa10.05□□□□□ -0.8
CSRP1-218ENST00000533402 TSPY10P0CW01 314 aa10.05□□□□□ -0.8
CSRP1-218ENST00000533402 ZNF771Q7L3S4 317 aaPredicted RBP10.05□□□□□ -0.8
CSRP1-218ENST00000533402 PLEKHD1A6NEE1 506 aa10.04□□□□□ -0.8
CSRP1-218ENST00000533402 GSE1Q14687 1217 aa10.04□□□□□ -0.8
CSRP1-218ENST00000533402 DCAF8L1A6NGE4 600 aa10.03□□□□□ -0.8
CSRP1-218ENST00000533402 PRDM2Q13029 1718 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms