RNA–Protein interactions for RNA: ENST00000533368.1

FNTA-211, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 2

Gene FNTA, Length 534 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-211ENST00000533368 CLIP1P30622 1438 aa18.4■□□□□ 0.54
FNTA-211ENST00000533368 CTTNBP2Q8WZ74 1663 aa18.33■□□□□ 0.52
FNTA-211ENST00000533368 KIAA0586Q9BVV6 1533 aa18.3■□□□□ 0.52
FNTA-211ENST00000533368 NUP160Q12769 1436 aa18.3■□□□□ 0.52
FNTA-211ENST00000533368 IQGAP2Q13576 1575 aa18.28■□□□□ 0.52
FNTA-211ENST00000533368 CEP170Q5SW79 1584 aa18.26■□□□□ 0.51
FNTA-211ENST00000533368 EFCAB5A4FU69 1503 aa18.24■□□□□ 0.51
FNTA-211ENST00000533368 CHD1O14646 1710 aa18.24■□□□□ 0.51
FNTA-211ENST00000533368 ARHGAP35Q9NRY4 1499 aa18.24■□□□□ 0.51
FNTA-211ENST00000533368 P3H3Q8IVL6 736 aa18.21■□□□□ 0.51
FNTA-211ENST00000533368 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
FNTA-211ENST00000533368 UGGT2Q9NYU1 1516 aa18.19■□□□□ 0.5
FNTA-211ENST00000533368 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
FNTA-211ENST00000533368 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
FNTA-211ENST00000533368 SAMD9Q5K651 1589 aa18.15■□□□□ 0.5
FNTA-211ENST00000533368 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
FNTA-211ENST00000533368 CARMIL2Q6F5E8 1435 aa18.14■□□□□ 0.49
FNTA-211ENST00000533368 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
FNTA-211ENST00000533368 APLP2Q06481 763 aa18.11■□□□□ 0.49
FNTA-211ENST00000533368 FMN1Q68DA7 1419 aa18.1■□□□□ 0.49
FNTA-211ENST00000533368 DISP1Q96F81 1524 aa18.09■□□□□ 0.49
FNTA-211ENST00000533368 KIAA0556O60303 1618 aa18.08■□□□□ 0.48
FNTA-211ENST00000533368 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
FNTA-211ENST00000533368 PRG4Q92954 1404 aaPredicted RBP18.07■□□□□ 0.48
FNTA-211ENST00000533368 ATP1B4Q9UN42 357 aaPredicted RBP18.03■□□□□ 0.48
FNTA-211ENST00000533368 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
FNTA-211ENST00000533368 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
FNTA-211ENST00000533368 CASKIN1Q8WXD9 1431 aa18.01■□□□□ 0.47
FNTA-211ENST00000533368 FYCO1Q9BQS8 1478 aa17.99■□□□□ 0.47
FNTA-211ENST00000533368 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
FNTA-211ENST00000533368 PTPRGP23470 1445 aa17.96■□□□□ 0.47
FNTA-211ENST00000533368 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
FNTA-211ENST00000533368 MAP3K1Q13233 1512 aa17.92■□□□□ 0.46
FNTA-211ENST00000533368 ERCC6L2Q5T890 1561 aa17.9■□□□□ 0.46
FNTA-211ENST00000533368 HECW1Q76N89 1606 aa17.9■□□□□ 0.46
FNTA-211ENST00000533368 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
FNTA-211ENST00000533368 PLB1Q6P1J6 1458 aa17.88■□□□□ 0.45
FNTA-211ENST00000533368 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
FNTA-211ENST00000533368 TIAM1Q13009 1591 aa17.87■□□□□ 0.45
FNTA-211ENST00000533368 KANK4Q5T7N3 995 aaPredicted RBP17.85■□□□□ 0.45
FNTA-211ENST00000533368 EPRSP07814 1512 aaKnown RBP17.84■□□□□ 0.45
FNTA-211ENST00000533368 UACAQ9BZF9 1416 aa17.84■□□□□ 0.45
FNTA-211ENST00000533368 ABCA8O94911 1581 aa17.83■□□□□ 0.45
FNTA-211ENST00000533368 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.45
FNTA-211ENST00000533368 ARID3CA6NKF2 412 aa17.83■□□□□ 0.44
FNTA-211ENST00000533368 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
FNTA-211ENST00000533368 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.44
FNTA-211ENST00000533368 CFAP43Q8NDM7 1665 aa17.82■□□□□ 0.44
FNTA-211ENST00000533368 LRRC9Q6ZRR7 1453 aa17.82■□□□□ 0.44
FNTA-211ENST00000533368 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
FNTA-211ENST00000533368 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
FNTA-211ENST00000533368 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
FNTA-211ENST00000533368 CDK13Q14004 1512 aaKnown RBP17.77■□□□□ 0.43
FNTA-211ENST00000533368 ABCC2Q92887 1545 aa17.76■□□□□ 0.43
FNTA-211ENST00000533368 UHRF1BP1LA0JNW5 1464 aa17.75■□□□□ 0.43
FNTA-211ENST00000533368 LRRIQ1Q96JM4 1722 aa17.75■□□□□ 0.43
FNTA-211ENST00000533368 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
FNTA-211ENST00000533368 ATP10BO94823 1461 aa17.73■□□□□ 0.43
FNTA-211ENST00000533368 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
FNTA-211ENST00000533368 PLEKHD1A6NEE1 506 aa17.72■□□□□ 0.43
FNTA-211ENST00000533368 PCGF6Q9BYE7 350 aa17.7■□□□□ 0.42
FNTA-211ENST00000533368 TROQ12816 1431 aaPredicted RBP17.67■□□□□ 0.42
FNTA-211ENST00000533368 MAGI3Q5TCQ9 1506 aa17.67■□□□□ 0.42
FNTA-211ENST00000533368 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
FNTA-211ENST00000533368 KDM5BQ9UGL1 1544 aa17.66■□□□□ 0.42
FNTA-211ENST00000533368 RIMBP3CA6NJZ7 1639 aa17.65■□□□□ 0.42
FNTA-211ENST00000533368 RIMBP3BA6NNM3 1639 aa17.65■□□□□ 0.42
FNTA-211ENST00000533368 RIMBP3Q9UFD9 1639 aa17.65■□□□□ 0.42
FNTA-211ENST00000533368 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
FNTA-211ENST00000533368 NCOA2Q15596 1464 aa17.64■□□□□ 0.41
FNTA-211ENST00000533368 CYB5RLQ6IPT4 315 aa17.64■□□□□ 0.41
FNTA-211ENST00000533368 ADCY10Q96PN6 1610 aa17.64■□□□□ 0.41
FNTA-211ENST00000533368 PHLDB1Q86UU1 1377 aa17.62■□□□□ 0.41
FNTA-211ENST00000533368 ZCCHC11Q5TAX3 1644 aaKnown RBP17.6■□□□□ 0.41
FNTA-211ENST00000533368 RRBP1Q9P2E9 1410 aaKnown RBP17.58■□□□□ 0.41
FNTA-211ENST00000533368 CCNB3Q8WWL7 1395 aa17.58■□□□□ 0.4
FNTA-211ENST00000533368 MYOM3Q5VTT5 1437 aa17.57■□□□□ 0.4
FNTA-211ENST00000533368 KIF14Q15058 1648 aa17.56■□□□□ 0.4
FNTA-211ENST00000533368 KCNH8Q96L42 1107 aa17.55■□□□□ 0.4
FNTA-211ENST00000533368 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
FNTA-211ENST00000533368 FGD6Q6ZV73 1430 aa17.54■□□□□ 0.4
FNTA-211ENST00000533368 WDR7Q9Y4E6 1490 aa17.51■□□□□ 0.39
FNTA-211ENST00000533368 MIA2Q96PC5 1412 aa17.51■□□□□ 0.39
FNTA-211ENST00000533368 ASXL2Q76L83 1435 aa17.5■□□□□ 0.39
FNTA-211ENST00000533368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.5■□□□□ 0.39
FNTA-211ENST00000533368 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
FNTA-211ENST00000533368 ABCC10Q5T3U5 1492 aa17.49■□□□□ 0.39
FNTA-211ENST00000533368 GPATCH8Q9UKJ3 1502 aaKnown RBP17.47■□□□□ 0.39
FNTA-211ENST00000533368 ITGAEP38570 1179 aa17.45■□□□□ 0.38
FNTA-211ENST00000533368 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
FNTA-211ENST00000533368 PTPN23Q9H3S7 1636 aa17.44■□□□□ 0.38
FNTA-211ENST00000533368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.44■□□□□ 0.387e-9■■■■■ 43
FNTA-211ENST00000533368 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
FNTA-211ENST00000533368 TCOF1Q13428 1488 aaKnown RBP17.43■□□□□ 0.38
FNTA-211ENST00000533368 MAPKBP1O60336 1514 aa17.42■□□□□ 0.38
FNTA-211ENST00000533368 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
FNTA-211ENST00000533368 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
FNTA-211ENST00000533368 PLCH2O75038 1416 aa17.38■□□□□ 0.37
FNTA-211ENST00000533368 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
FNTA-211ENST00000533368 CDC42BPAQ5VT25 1732 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms