RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 KIAA0586Q9BVV6 1533 aa16.77■□□□□ 0.28
NUP98-220ENST00000533346 JPH4Q96JJ6 628 aa16.74■□□□□ 0.27
NUP98-220ENST00000533346 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
NUP98-220ENST00000533346 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
NUP98-220ENST00000533346 PRG4Q92954 1404 aaPredicted RBP16.68■□□□□ 0.26
NUP98-220ENST00000533346 PRXQ9BXM0 1461 aa16.67■□□□□ 0.26
NUP98-220ENST00000533346 EEA1Q15075 1411 aa16.65■□□□□ 0.26
NUP98-220ENST00000533346 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
NUP98-220ENST00000533346 UGGT2Q9NYU1 1516 aa16.59■□□□□ 0.25
NUP98-220ENST00000533346 CTTNBP2Q8WZ74 1663 aa16.59■□□□□ 0.25
NUP98-220ENST00000533346 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
NUP98-220ENST00000533346 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
NUP98-220ENST00000533346 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
NUP98-220ENST00000533346 DISP1Q96F81 1524 aa16.53■□□□□ 0.24
NUP98-220ENST00000533346 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
NUP98-220ENST00000533346 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
NUP98-220ENST00000533346 PTPRGP23470 1445 aa16.48■□□□□ 0.23
NUP98-220ENST00000533346 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
NUP98-220ENST00000533346 KIF21BO75037 1637 aa16.47■□□□□ 0.23
NUP98-220ENST00000533346 ADCY10Q96PN6 1610 aa16.47■□□□□ 0.23
NUP98-220ENST00000533346 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
NUP98-220ENST00000533346 GOLGA3Q08378 1498 aa16.46■□□□□ 0.23
NUP98-220ENST00000533346 MAPKBP1O60336 1514 aa16.45■□□□□ 0.22
NUP98-220ENST00000533346 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
NUP98-220ENST00000533346 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
NUP98-220ENST00000533346 ABCC2Q92887 1545 aa16.38■□□□□ 0.21
NUP98-220ENST00000533346 SAMD9Q5K651 1589 aa16.38■□□□□ 0.21
NUP98-220ENST00000533346 KIF13AQ9H1H9 1805 aa16.38■□□□□ 0.21
NUP98-220ENST00000533346 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
NUP98-220ENST00000533346 KDM5BQ9UGL1 1544 aa16.35■□□□□ 0.21
NUP98-220ENST00000533346 ABCA8O94911 1581 aa16.34■□□□□ 0.21
NUP98-220ENST00000533346 FAM9AQ8IZU1 332 aaPredicted RBP16.32■□□□□ 0.2
NUP98-220ENST00000533346 DIP2BQ9P265 1576 aa16.3■□□□□ 0.2
NUP98-220ENST00000533346 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
NUP98-220ENST00000533346 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
NUP98-220ENST00000533346 ZCCHC11Q5TAX3 1644 aaKnown RBP16.27■□□□□ 0.2
NUP98-220ENST00000533346 GLI2P10070 1586 aa16.27■□□□□ 0.2
NUP98-220ENST00000533346 ASXL2Q76L83 1435 aa16.25■□□□□ 0.19
NUP98-220ENST00000533346 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
NUP98-220ENST00000533346 FAM69CQ0P6D2 419 aa16.22■□□□□ 0.19
NUP98-220ENST00000533346 RAPGEF6Q8TEU7 1601 aa16.2■□□□□ 0.18
NUP98-220ENST00000533346 UBTFP17480 764 aaKnown RBP16.18■□□□□ 0.18
NUP98-220ENST00000533346 EPRSP07814 1512 aaKnown RBP16.18■□□□□ 0.18
NUP98-220ENST00000533346 ATP10BO94823 1461 aa16.17■□□□□ 0.18
NUP98-220ENST00000533346 WDR7Q9Y4E6 1490 aa16.17■□□□□ 0.18
NUP98-220ENST00000533346 P3H3Q8IVL6 736 aa16.17■□□□□ 0.18
NUP98-220ENST00000533346 MAP3K4Q9Y6R4 1608 aa16.16■□□□□ 0.18
NUP98-220ENST00000533346 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
NUP98-220ENST00000533346 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
NUP98-220ENST00000533346 PPRC1Q5VV67 1664 aaKnown RBP16.14■□□□□ 0.17
NUP98-220ENST00000533346 NUP153P49790 1475 aaKnown RBP16.13■□□□□ 0.17
NUP98-220ENST00000533346 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
NUP98-220ENST00000533346 FMN1Q68DA7 1419 aa16.11■□□□□ 0.17
NUP98-220ENST00000533346 TSPOAP1O95153 1857 aa16.11■□□□□ 0.17
NUP98-220ENST00000533346 MAGI3Q5TCQ9 1506 aa16.07■□□□□ 0.16
NUP98-220ENST00000533346 TEX14Q8IWB6 1497 aa16.06■□□□□ 0.16
NUP98-220ENST00000533346 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
NUP98-220ENST00000533346 ABCA9Q8IUA7 1624 aa16.05■□□□□ 0.16
NUP98-220ENST00000533346 KDM6BO15054 1643 aa16.04■□□□□ 0.16
NUP98-220ENST00000533346 KDM4FA0A1W2PPD8 638 aa16.03■□□□□ 0.16
NUP98-220ENST00000533346 HECW1Q76N89 1606 aa16.03■□□□□ 0.16
NUP98-220ENST00000533346 CD109Q6YHK3 1445 aa16.02■□□□□ 0.15
NUP98-220ENST00000533346 EHMT2Q96KQ7 1210 aa16.01■□□□□ 0.15
NUP98-220ENST00000533346 PLEKHD1A6NEE1 506 aa15.99■□□□□ 0.15
NUP98-220ENST00000533346 KCNH8Q96L42 1107 aa15.99■□□□□ 0.15
NUP98-220ENST00000533346 CLIP1P30622 1438 aa15.98■□□□□ 0.15
NUP98-220ENST00000533346 CASKIN1Q8WXD9 1431 aa15.98■□□□□ 0.15
NUP98-220ENST00000533346 PHLDB1Q86UU1 1377 aa15.98■□□□□ 0.15
NUP98-220ENST00000533346 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
NUP98-220ENST00000533346 ILDR1Q86SU0 546 aaPredicted RBP15.95■□□□□ 0.14
NUP98-220ENST00000533346 COL17A1Q9UMD9 1497 aaPredicted RBP15.95■□□□□ 0.14
NUP98-220ENST00000533346 CDK13Q14004 1512 aaKnown RBP15.94■□□□□ 0.14
NUP98-220ENST00000533346 ARID3CA6NKF2 412 aa15.94■□□□□ 0.14
NUP98-220ENST00000533346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
NUP98-220ENST00000533346 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
NUP98-220ENST00000533346 ARAP3Q8WWN8 1544 aa15.94■□□□□ 0.14
NUP98-220ENST00000533346 CCDC18Q5T9S5 1454 aa15.93■□□□□ 0.14
NUP98-220ENST00000533346 CDK11AQ9UQ88 783 aaPredicted RBP15.93■□□□□ 0.14
NUP98-220ENST00000533346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.93■□□□□ 0.14
NUP98-220ENST00000533346 NEO1Q92859 1461 aa15.92■□□□□ 0.14
NUP98-220ENST00000533346 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
NUP98-220ENST00000533346 PCF11O94913 1555 aaKnown RBP15.92■□□□□ 0.14
NUP98-220ENST00000533346 TROQ12816 1431 aaPredicted RBP15.88■□□□□ 0.13
NUP98-220ENST00000533346 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
NUP98-220ENST00000533346 TTC37Q6PGP7 1564 aa15.87■□□□□ 0.13
NUP98-220ENST00000533346 CFAP74Q9C0B2 1584 aa15.87■□□□□ 0.13
NUP98-220ENST00000533346 PLCH2O75038 1416 aa15.85■□□□□ 0.13
NUP98-220ENST00000533346 KIF14Q15058 1648 aa15.84■□□□□ 0.13
NUP98-220ENST00000533346 MYO5CQ9NQX4 1742 aa15.83■□□□□ 0.13
NUP98-220ENST00000533346 ATP1B4Q9UN42 357 aaPredicted RBP15.83■□□□□ 0.12
NUP98-220ENST00000533346 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
NUP98-220ENST00000533346 FANCAO15360 1455 aa15.81■□□□□ 0.12
NUP98-220ENST00000533346 ADGRL1O94910 1474 aa15.81■□□□□ 0.12
NUP98-220ENST00000533346 AKNAQ7Z591 1439 aa15.8■□□□□ 0.12
NUP98-220ENST00000533346 RICTORQ6R327 1708 aa15.78■□□□□ 0.12
NUP98-220ENST00000533346 FRMPD1Q5SYB0 1578 aa15.78■□□□□ 0.12
NUP98-220ENST00000533346 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.12
NUP98-220ENST00000533346 HECW2Q9P2P5 1572 aa15.76■□□□□ 0.11
NUP98-220ENST00000533346 DENND4BO75064 1496 aaPredicted RBP15.76■□□□□ 0.11
NUP98-220ENST00000533346 EFCAB2Q5VUJ9 269 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms