RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 CARMIL1Q5VZK9 1371 aa29.47■■■□□ 2.31
NCAPD3-210ENST00000533155 PRG4Q92954 1404 aaPredicted RBP29.45■■■□□ 2.31
NCAPD3-210ENST00000533155 KIAA0586Q9BVV6 1533 aa29.43■■■□□ 2.3
NCAPD3-210ENST00000533155 TRHP20396 242 aaPredicted RBP29.41■■■□□ 2.3
NCAPD3-210ENST00000533155 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
NCAPD3-210ENST00000533155 IQGAP2Q13576 1575 aa29.21■■■□□ 2.27
NCAPD3-210ENST00000533155 CARMIL2Q6F5E8 1435 aa29.16■■■□□ 2.26
NCAPD3-210ENST00000533155 NPM1P06748 294 aaKnown RBP eCLIP29.07■■■□□ 2.24
NCAPD3-210ENST00000533155 PTPRGP23470 1445 aa29.07■■■□□ 2.24
NCAPD3-210ENST00000533155 TNIKQ9UKE5 1360 aa29.06■■■□□ 2.24
NCAPD3-210ENST00000533155 PRXQ9BXM0 1461 aa29.05■■■□□ 2.24
NCAPD3-210ENST00000533155 ADCY10Q96PN6 1610 aa29.04■■■□□ 2.24
NCAPD3-210ENST00000533155 UGGT2Q9NYU1 1516 aa29.03■■■□□ 2.24
NCAPD3-210ENST00000533155 DISP1Q96F81 1524 aa29■■■□□ 2.23
NCAPD3-210ENST00000533155 CTTNBP2Q8WZ74 1663 aa29■■■□□ 2.23
NCAPD3-210ENST00000533155 MAPKBP1O60336 1514 aa28.97■■■□□ 2.23
NCAPD3-210ENST00000533155 EEA1Q15075 1411 aa28.96■■■□□ 2.23
NCAPD3-210ENST00000533155 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
NCAPD3-210ENST00000533155 TTBK1Q5TCY1 1321 aaPredicted RBP28.95■■■□□ 2.23
NCAPD3-210ENST00000533155 KIAA0556O60303 1618 aa28.92■■■□□ 2.22
NCAPD3-210ENST00000533155 KIF13AQ9H1H9 1805 aa28.89■■■□□ 2.22
NCAPD3-210ENST00000533155 GOLGA3Q08378 1498 aa28.88■■■□□ 2.21
NCAPD3-210ENST00000533155 ABCC10Q5T3U5 1492 aa28.87■■■□□ 2.21
NCAPD3-210ENST00000533155 UACAQ9BZF9 1416 aa28.86■■■□□ 2.21
NCAPD3-210ENST00000533155 UHRF1BP1LA0JNW5 1464 aa28.86■■■□□ 2.21
NCAPD3-210ENST00000533155 ABCC2Q92887 1545 aa28.86■■■□□ 2.21
NCAPD3-210ENST00000533155 FAM69CQ0P6D2 419 aa28.82■■■□□ 2.2
NCAPD3-210ENST00000533155 CHIC1Q5VXU3 224 aa28.82■■■□□ 2.2
NCAPD3-210ENST00000533155 DIP2BQ9P265 1576 aa28.8■■■□□ 2.2
NCAPD3-210ENST00000533155 FAM9AQ8IZU1 332 aaPredicted RBP28.78■■■□□ 2.2
NCAPD3-210ENST00000533155 KDM5BQ9UGL1 1544 aa28.72■■■□□ 2.19
NCAPD3-210ENST00000533155 PLB1Q6P1J6 1458 aa28.72■■■□□ 2.19
NCAPD3-210ENST00000533155 ASXL2Q76L83 1435 aa28.7■■■□□ 2.19
NCAPD3-210ENST00000533155 KIF21BO75037 1637 aa28.65■■■□□ 2.18
NCAPD3-210ENST00000533155 ZCCHC11Q5TAX3 1644 aaKnown RBP28.64■■■□□ 2.18
NCAPD3-210ENST00000533155 ABCA8O94911 1581 aa28.62■■■□□ 2.17
NCAPD3-210ENST00000533155 SAMD9Q5K651 1589 aa28.6■■■□□ 2.17
NCAPD3-210ENST00000533155 GLI2P10070 1586 aa28.59■■■□□ 2.17
NCAPD3-210ENST00000533155 P3H3Q8IVL6 736 aa28.59■■■□□ 2.17
NCAPD3-210ENST00000533155 TSPOAP1O95153 1857 aa28.55■■■□□ 2.16
NCAPD3-210ENST00000533155 EPRSP07814 1512 aaKnown RBP28.53■■■□□ 2.16
NCAPD3-210ENST00000533155 WDR7Q9Y4E6 1490 aa28.51■■■□□ 2.15
NCAPD3-210ENST00000533155 RANGAP1P46060 587 aaPredicted RBP28.5■■■□□ 2.15
NCAPD3-210ENST00000533155 KDM6BO15054 1643 aa28.46■■■□□ 2.15
NCAPD3-210ENST00000533155 EFCAB5A4FU69 1503 aa28.44■■■□□ 2.14
NCAPD3-210ENST00000533155 UBTFP17480 764 aaKnown RBP28.44■■■□□ 2.14
NCAPD3-210ENST00000533155 EHMT2Q96KQ7 1210 aa28.43■■■□□ 2.14
NCAPD3-210ENST00000533155 MAP3K4Q9Y6R4 1608 aa28.43■■■□□ 2.14
NCAPD3-210ENST00000533155 RAPGEF6Q8TEU7 1601 aa28.42■■■□□ 2.14
NCAPD3-210ENST00000533155 FHOD3Q2V2M9 1422 aa28.41■■■□□ 2.14
NCAPD3-210ENST00000533155 PPRC1Q5VV67 1664 aaKnown RBP28.41■■■□□ 2.14
NCAPD3-210ENST00000533155 TEX14Q8IWB6 1497 aa28.38■■■□□ 2.13
NCAPD3-210ENST00000533155 ATP10BO94823 1461 aa28.37■■■□□ 2.13
NCAPD3-210ENST00000533155 ARID3CA6NKF2 412 aa28.34■■■□□ 2.13
NCAPD3-210ENST00000533155 KCNH8Q96L42 1107 aa28.34■■■□□ 2.13
NCAPD3-210ENST00000533155 CFAP43Q8NDM7 1665 aa28.31■■■□□ 2.12
NCAPD3-210ENST00000533155 NUP153P49790 1475 aaKnown RBP28.29■■■□□ 2.12
NCAPD3-210ENST00000533155 CD109Q6YHK3 1445 aa28.29■■■□□ 2.12
NCAPD3-210ENST00000533155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.27■■■□□ 2.12
NCAPD3-210ENST00000533155 HNRNPUL2Q1KMD3 747 aaKnown RBP28.27■■■□□ 2.12
NCAPD3-210ENST00000533155 MAGI3Q5TCQ9 1506 aa28.26■■■□□ 2.11
NCAPD3-210ENST00000533155 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
NCAPD3-210ENST00000533155 ARHGAP35Q9NRY4 1499 aa28.2■■■□□ 2.1
NCAPD3-210ENST00000533155 FMN1Q68DA7 1419 aa28.19■■■□□ 2.1
NCAPD3-210ENST00000533155 ABCA9Q8IUA7 1624 aa28.17■■■□□ 2.1
NCAPD3-210ENST00000533155 COL17A1Q9UMD9 1497 aaPredicted RBP28.16■■■□□ 2.1
NCAPD3-210ENST00000533155 PLEKHD1A6NEE1 506 aa28.14■■■□□ 2.1
NCAPD3-210ENST00000533155 HECW1Q76N89 1606 aa28.09■■■□□ 2.09
NCAPD3-210ENST00000533155 PHLDB1Q86UU1 1377 aa28.06■■■□□ 2.08
NCAPD3-210ENST00000533155 ATP1B4Q9UN42 357 aaPredicted RBP28.05■■■□□ 2.08
NCAPD3-210ENST00000533155 CDK13Q14004 1512 aaKnown RBP28.04■■■□□ 2.08
NCAPD3-210ENST00000533155 ARAP3Q8WWN8 1544 aa28.02■■■□□ 2.08
NCAPD3-210ENST00000533155 NEO1Q92859 1461 aa28■■■□□ 2.07
NCAPD3-210ENST00000533155 CDK11AQ9UQ88 783 aaPredicted RBP27.98■■■□□ 2.07
NCAPD3-210ENST00000533155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.95■■■□□ 2.061e-5■■■■□ 25.8
NCAPD3-210ENST00000533155 CLIP1P30622 1438 aa27.93■■■□□ 2.06
NCAPD3-210ENST00000533155 KDM4FA0A1W2PPD8 638 aa27.92■■■□□ 2.06
NCAPD3-210ENST00000533155 CASKIN1Q8WXD9 1431 aa27.91■■■□□ 2.06
NCAPD3-210ENST00000533155 TTC37Q6PGP7 1564 aa27.9■■■□□ 2.06
NCAPD3-210ENST00000533155 CFAP74Q9C0B2 1584 aa27.89■■■□□ 2.05
NCAPD3-210ENST00000533155 PCF11O94913 1555 aaKnown RBP27.87■■■□□ 2.05
NCAPD3-210ENST00000533155 FANCAO15360 1455 aa27.87■■■□□ 2.05
NCAPD3-210ENST00000533155 CCDC18Q5T9S5 1454 aa27.87■■■□□ 2.05
NCAPD3-210ENST00000533155 LRRIQ1Q96JM4 1722 aa27.87■■■□□ 2.05
NCAPD3-210ENST00000533155 ADGRL1O94910 1474 aa27.85■■■□□ 2.05
NCAPD3-210ENST00000533155 TROQ12816 1431 aaPredicted RBP27.84■■■□□ 2.05
NCAPD3-210ENST00000533155 AKNAQ7Z591 1439 aa27.84■■■□□ 2.05
NCAPD3-210ENST00000533155 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.05
NCAPD3-210ENST00000533155 RAPGEF3O95398 923 aa27.83■■■□□ 2.05
NCAPD3-210ENST00000533155 KIF14Q15058 1648 aa27.82■■■□□ 2.04
NCAPD3-210ENST00000533155 PLCH2O75038 1416 aa27.8■■■□□ 2.04
NCAPD3-210ENST00000533155 DENND4BO75064 1496 aaPredicted RBP27.79■■■□□ 2.04
NCAPD3-210ENST00000533155 FRMPD1Q5SYB0 1578 aa27.77■■■□□ 2.04
NCAPD3-210ENST00000533155 MYO5CQ9NQX4 1742 aa27.76■■■□□ 2.03
NCAPD3-210ENST00000533155 EFCAB2Q5VUJ9 269 aa27.72■■■□□ 2.03
NCAPD3-210ENST00000533155 RICTORQ6R327 1708 aa27.72■■■□□ 2.03
NCAPD3-210ENST00000533155 CEP162Q5TB80 1403 aa27.71■■■□□ 2.03
NCAPD3-210ENST00000533155 SCAPERQ9BY12 1400 aa27.67■■■□□ 2.02
NCAPD3-210ENST00000533155 LOC105371045A0A1W2PR82 267 aa27.66■■■□□ 2.02
NCAPD3-210ENST00000533155 ARHGAP5Q13017 1502 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms