RNA–Protein interactions for RNA: ENST00000532931.5

ATM-219, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-219ENST00000532931 PRXQ9BXM0 1461 aa20.7■□□□□ 0.9
ATM-219ENST00000532931 FBLN2P98095 1184 aa20.69■□□□□ 0.9
ATM-219ENST00000532931 NUP160Q12769 1436 aa20.69■□□□□ 0.9
ATM-219ENST00000532931 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
ATM-219ENST00000532931 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
ATM-219ENST00000532931 CSRNP3Q8WYN3 585 aa20.68■□□□□ 0.9
ATM-219ENST00000532931 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
ATM-219ENST00000532931 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
ATM-219ENST00000532931 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
ATM-219ENST00000532931 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
ATM-219ENST00000532931 KIF21BO75037 1637 aa20.64■□□□□ 0.89
ATM-219ENST00000532931 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
ATM-219ENST00000532931 ARHGEF11O15085 1522 aa20.61■□□□□ 0.89
ATM-219ENST00000532931 CTTNBP2Q8WZ74 1663 aa20.59■□□□□ 0.89
ATM-219ENST00000532931 SHROOM2Q13796 1616 aa20.58■□□□□ 0.89
ATM-219ENST00000532931 KIAA0586Q9BVV6 1533 aa20.55■□□□□ 0.88
ATM-219ENST00000532931 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
ATM-219ENST00000532931 IQGAP2Q13576 1575 aa20.5■□□□□ 0.87
ATM-219ENST00000532931 TRHP20396 242 aaPredicted RBP20.48■□□□□ 0.87
ATM-219ENST00000532931 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
ATM-219ENST00000532931 JPH4Q96JJ6 628 aa20.42■□□□□ 0.86
ATM-219ENST00000532931 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
ATM-219ENST00000532931 ARAP1Q96P48 1450 aa20.4■□□□□ 0.86
ATM-219ENST00000532931 ERCC6L2Q5T890 1561 aa20.37■□□□□ 0.85
ATM-219ENST00000532931 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
ATM-219ENST00000532931 DISP1Q96F81 1524 aa20.32■□□□□ 0.84
ATM-219ENST00000532931 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
ATM-219ENST00000532931 KIAA0556O60303 1618 aa20.29■□□□□ 0.84
ATM-219ENST00000532931 CARMIL2Q6F5E8 1435 aa20.27■□□□□ 0.84
ATM-219ENST00000532931 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
ATM-219ENST00000532931 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
ATM-219ENST00000532931 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
ATM-219ENST00000532931 EHMT2Q96KQ7 1210 aa20.18■□□□□ 0.82
ATM-219ENST00000532931 PTPRGP23470 1445 aa20.14■□□□□ 0.81
ATM-219ENST00000532931 ARHGAP35Q9NRY4 1499 aa20.13■□□□□ 0.81
ATM-219ENST00000532931 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
ATM-219ENST00000532931 ADCY10Q96PN6 1610 aa20.09■□□□□ 0.81
ATM-219ENST00000532931 ABCA8O94911 1581 aa20.08■□□□□ 0.8
ATM-219ENST00000532931 UHRF1BP1LA0JNW5 1464 aa20.07■□□□□ 0.8
ATM-219ENST00000532931 CLIP1P30622 1438 aa20.05■□□□□ 0.8
ATM-219ENST00000532931 FHOD3Q2V2M9 1422 aa20.05■□□□□ 0.8
ATM-219ENST00000532931 CEP162Q5TB80 1403 aa20.04■□□□□ 0.8
ATM-219ENST00000532931 UACAQ9BZF9 1416 aa20.04■□□□□ 0.8
ATM-219ENST00000532931 ABCC2Q92887 1545 aa20.04■□□□□ 0.8
ATM-219ENST00000532931 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
ATM-219ENST00000532931 RANGAP1P46060 587 aaPredicted RBP20.02■□□□□ 0.8
ATM-219ENST00000532931 RAPGEF6Q8TEU7 1601 aa20.02■□□□□ 0.79
ATM-219ENST00000532931 PLB1Q6P1J6 1458 aa20.01■□□□□ 0.79
ATM-219ENST00000532931 FMN1Q68DA7 1419 aa19.99■□□□□ 0.79
ATM-219ENST00000532931 KDM5BQ9UGL1 1544 aa19.97■□□□□ 0.79
ATM-219ENST00000532931 ZCCHC11Q5TAX3 1644 aaKnown RBP19.94■□□□□ 0.78
ATM-219ENST00000532931 TTBK1Q5TCY1 1321 aaPredicted RBP19.94■□□□□ 0.78
ATM-219ENST00000532931 LRRIQ1Q96JM4 1722 aa19.92■□□□□ 0.78
ATM-219ENST00000532931 MAPKBP1O60336 1514 aa19.92■□□□□ 0.78
ATM-219ENST00000532931 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
ATM-219ENST00000532931 HECW1Q76N89 1606 aa19.9■□□□□ 0.78
ATM-219ENST00000532931 PCF11O94913 1555 aaKnown RBP19.87■□□□□ 0.77
ATM-219ENST00000532931 CASKIN1Q8WXD9 1431 aa19.87■□□□□ 0.77
ATM-219ENST00000532931 ATP10BO94823 1461 aa19.86■□□□□ 0.77
ATM-219ENST00000532931 FYCO1Q9BQS8 1478 aa19.86■□□□□ 0.77
ATM-219ENST00000532931 NPM1P06748 294 aaKnown RBP eCLIP19.86■□□□□ 0.77
ATM-219ENST00000532931 KIF13AQ9H1H9 1805 aa19.83■□□□□ 0.76
ATM-219ENST00000532931 EPRSP07814 1512 aaKnown RBP19.81■□□□□ 0.76
ATM-219ENST00000532931 VPS8Q8N3P4 1428 aa19.8■□□□□ 0.76
ATM-219ENST00000532931 ASXL2Q76L83 1435 aa19.78■□□□□ 0.76
ATM-219ENST00000532931 CCDC18Q5T9S5 1454 aa19.78■□□□□ 0.76
ATM-219ENST00000532931 CDK13Q14004 1512 aaKnown RBP19.76■□□□□ 0.75
ATM-219ENST00000532931 DIP2BQ9P265 1576 aa19.75■□□□□ 0.75
ATM-219ENST00000532931 WDR7Q9Y4E6 1490 aa19.75■□□□□ 0.75
ATM-219ENST00000532931 ABCC10Q5T3U5 1492 aa19.74■□□□□ 0.75
ATM-219ENST00000532931 GLI2P10070 1586 aa19.74■□□□□ 0.75
ATM-219ENST00000532931 CFAP43Q8NDM7 1665 aa19.72■□□□□ 0.75
ATM-219ENST00000532931 MAP3K1Q13233 1512 aa19.7■□□□□ 0.74
ATM-219ENST00000532931 MAP3K4Q9Y6R4 1608 aa19.67■□□□□ 0.74
ATM-219ENST00000532931 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
ATM-219ENST00000532931 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
ATM-219ENST00000532931 ABCA9Q8IUA7 1624 aa19.66■□□□□ 0.74
ATM-219ENST00000532931 TIAM1Q13009 1591 aa19.66■□□□□ 0.74
ATM-219ENST00000532931 PLEKHD1A6NEE1 506 aa19.65■□□□□ 0.74
ATM-219ENST00000532931 FAM69CQ0P6D2 419 aa19.65■□□□□ 0.74
ATM-219ENST00000532931 MAGI3Q5TCQ9 1506 aa19.65■□□□□ 0.74
ATM-219ENST00000532931 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.73
ATM-219ENST00000532931 TROQ12816 1431 aaPredicted RBP19.63■□□□□ 0.73
ATM-219ENST00000532931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
ATM-219ENST00000532931 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
ATM-219ENST00000532931 PPRC1Q5VV67 1664 aaKnown RBP19.61■□□□□ 0.73
ATM-219ENST00000532931 KIF14Q15058 1648 aa19.6■□□□□ 0.73
ATM-219ENST00000532931 TSPOAP1O95153 1857 aa19.6■□□□□ 0.73
ATM-219ENST00000532931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.59■□□□□ 0.73
ATM-219ENST00000532931 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
ATM-219ENST00000532931 KCNH8Q96L42 1107 aa19.56■□□□□ 0.72
ATM-219ENST00000532931 TTC37Q6PGP7 1564 aa19.56■□□□□ 0.72
ATM-219ENST00000532931 MYO5CQ9NQX4 1742 aa19.55■□□□□ 0.72
ATM-219ENST00000532931 LRRC9Q6ZRR7 1453 aa19.54■□□□□ 0.72
ATM-219ENST00000532931 MAPK8IP2Q13387 824 aaPredicted RBP19.53■□□□□ 0.72
ATM-219ENST00000532931 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
ATM-219ENST00000532931 SUPT6HQ7KZ85 1726 aaKnown RBP19.53■□□□□ 0.72
ATM-219ENST00000532931 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
ATM-219ENST00000532931 CD109Q6YHK3 1445 aa19.51■□□□□ 0.71
ATM-219ENST00000532931 MTUS2Q5JR59 1369 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms