RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 APLP2Q06481 763 aa26.91■■□□□ 1.9
UBXN1-213ENST00000532904 ZNF316A6NFI3 1004 aaPredicted RBP26.91■■□□□ 1.9
UBXN1-213ENST00000532904 WDR62O43379 1518 aa26.89■■□□□ 1.89
UBXN1-213ENST00000532904 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.89
UBXN1-213ENST00000532904 CTTNBP2Q8WZ74 1663 aa26.87■■□□□ 1.89
UBXN1-213ENST00000532904 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
UBXN1-213ENST00000532904 GTF3C3Q9Y5Q9 886 aa26.79■■□□□ 1.88
UBXN1-213ENST00000532904 EFCAB5A4FU69 1503 aa26.79■■□□□ 1.88
UBXN1-213ENST00000532904 IFT140Q96RY7 1462 aa26.78■■□□□ 1.88
UBXN1-213ENST00000532904 MAP3K1Q13233 1512 aa26.73■■□□□ 1.87
UBXN1-213ENST00000532904 HNRNPUL2Q1KMD3 747 aaKnown RBP26.72■■□□□ 1.87
UBXN1-213ENST00000532904 ERCC6Q03468 1493 aa26.72■■□□□ 1.87
UBXN1-213ENST00000532904 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
UBXN1-213ENST00000532904 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.87
UBXN1-213ENST00000532904 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
UBXN1-213ENST00000532904 ADAMTS12P58397 1594 aa26.66■■□□□ 1.86
UBXN1-213ENST00000532904 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.868e-8■■■■□ 24
UBXN1-213ENST00000532904 TIAM1Q13009 1591 aa26.61■■□□□ 1.85
UBXN1-213ENST00000532904 SAMD9Q5K651 1589 aa26.61■■□□□ 1.85
UBXN1-213ENST00000532904 KANK4Q5T7N3 995 aaPredicted RBP26.58■■□□□ 1.85
UBXN1-213ENST00000532904 ZNF608Q9ULD9 1512 aaPredicted RBP26.57■■□□□ 1.84
UBXN1-213ENST00000532904 PCF11O94913 1555 aaKnown RBP26.56■■□□□ 1.84
UBXN1-213ENST00000532904 CFAP43Q8NDM7 1665 aa26.55■■□□□ 1.84
UBXN1-213ENST00000532904 FYCO1Q9BQS8 1478 aa26.55■■□□□ 1.84
UBXN1-213ENST00000532904 FHOD3Q2V2M9 1422 aa26.54■■□□□ 1.84
UBXN1-213ENST00000532904 EIF4G3O43432 1585 aaKnown RBP26.53■■□□□ 1.84
UBXN1-213ENST00000532904 FMN1Q68DA7 1419 aa26.53■■□□□ 1.84
UBXN1-213ENST00000532904 CASKIN1Q8WXD9 1431 aa26.52■■□□□ 1.84
UBXN1-213ENST00000532904 MIER1Q8N108 512 aa26.51■■□□□ 1.83
UBXN1-213ENST00000532904 RRBP1Q9P2E9 1410 aaKnown RBP26.5■■□□□ 1.83
UBXN1-213ENST00000532904 IQGAP2Q13576 1575 aa26.47■■□□□ 1.83
UBXN1-213ENST00000532904 LRRC9Q6ZRR7 1453 aa26.47■■□□□ 1.83
UBXN1-213ENST00000532904 CLSPNQ9HAW4 1339 aa26.47■■□□□ 1.83
UBXN1-213ENST00000532904 P3H3Q8IVL6 736 aa26.46■■□□□ 1.83
UBXN1-213ENST00000532904 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
UBXN1-213ENST00000532904 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
UBXN1-213ENST00000532904 YTHDC1Q96MU7 727 aaKnown RBP26.42■■□□□ 1.82
UBXN1-213ENST00000532904 UGGT2Q9NYU1 1516 aa26.36■■□□□ 1.81
UBXN1-213ENST00000532904 DHX57Q6P158 1386 aaKnown RBP26.36■■□□□ 1.81
UBXN1-213ENST00000532904 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
UBXN1-213ENST00000532904 KIAA0586Q9BVV6 1533 aa26.34■■□□□ 1.81
UBXN1-213ENST00000532904 CCNB3Q8WWL7 1395 aa26.34■■□□□ 1.81
UBXN1-213ENST00000532904 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
UBXN1-213ENST00000532904 LRRIQ1Q96JM4 1722 aa26.27■■□□□ 1.8
UBXN1-213ENST00000532904 ATP1B4Q9UN42 357 aaPredicted RBP26.24■■□□□ 1.79
UBXN1-213ENST00000532904 PHLDB1Q86UU1 1377 aa26.22■■□□□ 1.79
UBXN1-213ENST00000532904 HECW1Q76N89 1606 aa26.21■■□□□ 1.79
UBXN1-213ENST00000532904 CCDC18Q5T9S5 1454 aa26.21■■□□□ 1.79
UBXN1-213ENST00000532904 KIAA0556O60303 1618 aa26.19■■□□□ 1.78
UBXN1-213ENST00000532904 CEP170Q5SW79 1584 aa26.17■■□□□ 1.78
UBXN1-213ENST00000532904 DISP1Q96F81 1524 aa26.16■■□□□ 1.78
UBXN1-213ENST00000532904 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
UBXN1-213ENST00000532904 NUP160Q12769 1436 aa26.16■■□□□ 1.78
UBXN1-213ENST00000532904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.15■■□□□ 1.78
UBXN1-213ENST00000532904 EHBP1L1Q8N3D4 1523 aa26.14■■□□□ 1.78
UBXN1-213ENST00000532904 MTUS2Q5JR59 1369 aa26.14■■□□□ 1.77
UBXN1-213ENST00000532904 SUPT6HQ7KZ85 1726 aaKnown RBP26.1■■□□□ 1.77
UBXN1-213ENST00000532904 MYT1Q01538 1121 aa26.08■■□□□ 1.77
UBXN1-213ENST00000532904 EPRSP07814 1512 aaKnown RBP26.07■■□□□ 1.76
UBXN1-213ENST00000532904 ARHGEF11O15085 1522 aa26.04■■□□□ 1.76
UBXN1-213ENST00000532904 FGD6Q6ZV73 1430 aa26.03■■□□□ 1.76
UBXN1-213ENST00000532904 NCOA2Q15596 1464 aa26.03■■□□□ 1.76
UBXN1-213ENST00000532904 MAGI3Q5TCQ9 1506 aa26■■□□□ 1.75
UBXN1-213ENST00000532904 RAPGEF6Q8TEU7 1601 aa26■■□□□ 1.75
UBXN1-213ENST00000532904 MYOM3Q5VTT5 1437 aa25.99■■□□□ 1.75
UBXN1-213ENST00000532904 CARMIL2Q6F5E8 1435 aa25.98■■□□□ 1.75
UBXN1-213ENST00000532904 FBLN2P98095 1184 aa25.98■■□□□ 1.75
UBXN1-213ENST00000532904 FAM50AQ14320 339 aaKnown RBP25.96■■□□□ 1.75
UBXN1-213ENST00000532904 CDK13Q14004 1512 aaKnown RBP25.94■■□□□ 1.74
UBXN1-213ENST00000532904 JPH4Q96JJ6 628 aa25.94■■□□□ 1.74
UBXN1-213ENST00000532904 SETD5Q9C0A6 1442 aa25.93■■□□□ 1.74
UBXN1-213ENST00000532904 NUP153P49790 1475 aaKnown RBP25.93■■□□□ 1.74
UBXN1-213ENST00000532904 ITGAEP38570 1179 aa25.92■■□□□ 1.74
UBXN1-213ENST00000532904 RAB3GAP2Q9H2M9 1393 aa25.91■■□□□ 1.74
UBXN1-213ENST00000532904 MAPKBP1O60336 1514 aa25.9■■□□□ 1.74
UBXN1-213ENST00000532904 CHD1O14646 1710 aa25.88■■□□□ 1.73
UBXN1-213ENST00000532904 PTPN23Q9H3S7 1636 aa25.87■■□□□ 1.73
UBXN1-213ENST00000532904 TCOF1Q13428 1488 aaKnown RBP25.86■■□□□ 1.73
UBXN1-213ENST00000532904 MIA2Q96PC5 1412 aa25.83■■□□□ 1.73
UBXN1-213ENST00000532904 CDK11AQ9UQ88 783 aaPredicted RBP25.8■■□□□ 1.72
UBXN1-213ENST00000532904 SUPT16HQ9Y5B9 1047 aaKnown RBP25.79■■□□□ 1.72
UBXN1-213ENST00000532904 PLB1Q6P1J6 1458 aa25.79■■□□□ 1.72
UBXN1-213ENST00000532904 ABCA8O94911 1581 aa25.79■■□□□ 1.72
UBXN1-213ENST00000532904 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
UBXN1-213ENST00000532904 HFM1A2PYH4 1435 aa25.75■■□□□ 1.71
UBXN1-213ENST00000532904 ADCY10Q96PN6 1610 aa25.73■■□□□ 1.71
UBXN1-213ENST00000532904 TROQ12816 1431 aaPredicted RBP25.73■■□□□ 1.71
UBXN1-213ENST00000532904 PTPRKQ15262 1439 aa25.73■■□□□ 1.71
UBXN1-213ENST00000532904 PRG4Q92954 1404 aaPredicted RBP25.73■■□□□ 1.71
UBXN1-213ENST00000532904 ARID3CA6NKF2 412 aa25.68■■□□□ 1.7
UBXN1-213ENST00000532904 AKNAQ7Z591 1439 aa25.66■■□□□ 1.7
UBXN1-213ENST00000532904 ITSN2Q9NZM3 1697 aa25.64■■□□□ 1.7
UBXN1-213ENST00000532904 PTPRGP23470 1445 aa25.64■■□□□ 1.69
UBXN1-213ENST00000532904 NAIPQ13075 1403 aa25.64■■□□□ 1.69
UBXN1-213ENST00000532904 TIMELESSQ9UNS1 1208 aa25.64■■□□□ 1.69
UBXN1-213ENST00000532904 GCC2Q8IWJ2 1684 aa25.63■■□□□ 1.69
UBXN1-213ENST00000532904 ATP10BO94823 1461 aa25.61■■□□□ 1.69
UBXN1-213ENST00000532904 CLASP1Q7Z460 1538 aa25.59■■□□□ 1.69
UBXN1-213ENST00000532904 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.69
UBXN1-213ENST00000532904 DNMT1P26358 1616 aaKnown RBP25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms