RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 KIF21BO75037 1637 aa23.55■■□□□ 1.36
COL16A1-217ENST00000532877 CARMIL1Q5VZK9 1371 aa23.54■■□□□ 1.36
COL16A1-217ENST00000532877 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
COL16A1-217ENST00000532877 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
COL16A1-217ENST00000532877 ERCC6L2Q5T890 1561 aa23.46■■□□□ 1.35
COL16A1-217ENST00000532877 GOLGA3Q08378 1498 aa23.43■■□□□ 1.34
COL16A1-217ENST00000532877 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
COL16A1-217ENST00000532877 KIF13AQ9H1H9 1805 aa23.39■■□□□ 1.33
COL16A1-217ENST00000532877 EHMT2Q96KQ7 1210 aa23.36■■□□□ 1.33
COL16A1-217ENST00000532877 SHROOM2Q13796 1616 aa23.36■■□□□ 1.33
COL16A1-217ENST00000532877 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
COL16A1-217ENST00000532877 NUP160Q12769 1436 aa23.33■■□□□ 1.33
COL16A1-217ENST00000532877 LOC105371045A0A1W2PR82 267 aa23.3■■□□□ 1.32
COL16A1-217ENST00000532877 CTTNBP2Q8WZ74 1663 aa23.29■■□□□ 1.32
COL16A1-217ENST00000532877 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
COL16A1-217ENST00000532877 TNIKQ9UKE5 1360 aa23.21■■□□□ 1.31
COL16A1-217ENST00000532877 KIAA0586Q9BVV6 1533 aa23.2■■□□□ 1.3
COL16A1-217ENST00000532877 IQGAP2Q13576 1575 aa23.19■■□□□ 1.3
COL16A1-217ENST00000532877 ABCC10Q5T3U5 1492 aa23.07■■□□□ 1.28
COL16A1-217ENST00000532877 UGGT2Q9NYU1 1516 aa23.07■■□□□ 1.28
COL16A1-217ENST00000532877 CEP162Q5TB80 1403 aa23.07■■□□□ 1.28
COL16A1-217ENST00000532877 MAPKBP1O60336 1514 aa23.05■■□□□ 1.28
COL16A1-217ENST00000532877 PRG4Q92954 1404 aaPredicted RBP23.04■■□□□ 1.28
COL16A1-217ENST00000532877 DIP2BQ9P265 1576 aa23.04■■□□□ 1.28
COL16A1-217ENST00000532877 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
COL16A1-217ENST00000532877 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
COL16A1-217ENST00000532877 CLIP1P30622 1438 aa23.01■■□□□ 1.27
COL16A1-217ENST00000532877 EFCAB5A4FU69 1503 aa23.01■■□□□ 1.27
COL16A1-217ENST00000532877 JPH4Q96JJ6 628 aa23■■□□□ 1.27
COL16A1-217ENST00000532877 ARHGAP35Q9NRY4 1499 aa22.98■■□□□ 1.27
COL16A1-217ENST00000532877 DISP1Q96F81 1524 aa22.98■■□□□ 1.27
COL16A1-217ENST00000532877 KIAA0556O60303 1618 aa22.97■■□□□ 1.27
COL16A1-217ENST00000532877 ADCY10Q96PN6 1610 aa22.97■■□□□ 1.27
COL16A1-217ENST00000532877 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
COL16A1-217ENST00000532877 FAM69CQ0P6D2 419 aa22.93■■□□□ 1.26
COL16A1-217ENST00000532877 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
COL16A1-217ENST00000532877 KDM6BO15054 1643 aa22.91■■□□□ 1.26
COL16A1-217ENST00000532877 FHOD3Q2V2M9 1422 aa22.89■■□□□ 1.25
COL16A1-217ENST00000532877 P3H3Q8IVL6 736 aa22.86■■□□□ 1.25
COL16A1-217ENST00000532877 TSPOAP1O95153 1857 aa22.85■■□□□ 1.25
COL16A1-217ENST00000532877 ILDR1Q86SU0 546 aaPredicted RBP22.79■■□□□ 1.24
COL16A1-217ENST00000532877 PPRC1Q5VV67 1664 aaKnown RBP22.77■■□□□ 1.24
COL16A1-217ENST00000532877 NPM1P06748 294 aaKnown RBP eCLIP22.76■■□□□ 1.23
COL16A1-217ENST00000532877 FMN1Q68DA7 1419 aa22.75■■□□□ 1.23
COL16A1-217ENST00000532877 PTPRGP23470 1445 aa22.74■■□□□ 1.23
COL16A1-217ENST00000532877 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
COL16A1-217ENST00000532877 TTBK1Q5TCY1 1321 aaPredicted RBP22.72■■□□□ 1.23
COL16A1-217ENST00000532877 PCF11O94913 1555 aaKnown RBP22.71■■□□□ 1.23
COL16A1-217ENST00000532877 GLI2P10070 1586 aa22.67■■□□□ 1.22
COL16A1-217ENST00000532877 RAPGEF6Q8TEU7 1601 aa22.67■■□□□ 1.22
COL16A1-217ENST00000532877 ABCA8O94911 1581 aa22.67■■□□□ 1.22
COL16A1-217ENST00000532877 PLB1Q6P1J6 1458 aa22.66■■□□□ 1.22
COL16A1-217ENST00000532877 FYCO1Q9BQS8 1478 aa22.65■■□□□ 1.22
COL16A1-217ENST00000532877 CASKIN1Q8WXD9 1431 aa22.65■■□□□ 1.22
COL16A1-217ENST00000532877 HECW1Q76N89 1606 aa22.63■■□□□ 1.21
COL16A1-217ENST00000532877 UACAQ9BZF9 1416 aa22.62■■□□□ 1.21
COL16A1-217ENST00000532877 ABCC2Q92887 1545 aa22.62■■□□□ 1.21
COL16A1-217ENST00000532877 ADGRL1O94910 1474 aa22.61■■□□□ 1.21
COL16A1-217ENST00000532877 COL17A1Q9UMD9 1497 aaPredicted RBP22.59■■□□□ 1.21
COL16A1-217ENST00000532877 UHRF1BP1LA0JNW5 1464 aa22.58■■□□□ 1.2
COL16A1-217ENST00000532877 NUP153P49790 1475 aaKnown RBP22.58■■□□□ 1.2
COL16A1-217ENST00000532877 LRRIQ1Q96JM4 1722 aa22.57■■□□□ 1.2
COL16A1-217ENST00000532877 ASXL2Q76L83 1435 aa22.56■■□□□ 1.2
COL16A1-217ENST00000532877 MAP3K4Q9Y6R4 1608 aa22.54■■□□□ 1.2
COL16A1-217ENST00000532877 HECW2Q9P2P5 1572 aa22.53■■□□□ 1.2
COL16A1-217ENST00000532877 ATP1B4Q9UN42 357 aaPredicted RBP22.52■■□□□ 1.2
COL16A1-217ENST00000532877 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.19
COL16A1-217ENST00000532877 CFAP43Q8NDM7 1665 aa22.51■■□□□ 1.19
COL16A1-217ENST00000532877 CCDC18Q5T9S5 1454 aa22.5■■□□□ 1.19
COL16A1-217ENST00000532877 CDK13Q14004 1512 aaKnown RBP22.5■■□□□ 1.19
COL16A1-217ENST00000532877 TIAM1Q13009 1591 aa22.47■■□□□ 1.19
COL16A1-217ENST00000532877 KDM5BQ9UGL1 1544 aa22.47■■□□□ 1.19
COL16A1-217ENST00000532877 ZCCHC11Q5TAX3 1644 aaKnown RBP22.46■■□□□ 1.19
COL16A1-217ENST00000532877 ARID3CA6NKF2 412 aa22.46■■□□□ 1.19
COL16A1-217ENST00000532877 ATP10BO94823 1461 aa22.46■■□□□ 1.19
COL16A1-217ENST00000532877 MAP3K1Q13233 1512 aa22.46■■□□□ 1.19
COL16A1-217ENST00000532877 APLP2Q06481 763 aa22.4■■□□□ 1.18
COL16A1-217ENST00000532877 TEX14Q8IWB6 1497 aa22.37■■□□□ 1.17
COL16A1-217ENST00000532877 MAGI3Q5TCQ9 1506 aa22.36■■□□□ 1.17
COL16A1-217ENST00000532877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
COL16A1-217ENST00000532877 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
COL16A1-217ENST00000532877 LRRC9Q6ZRR7 1453 aa22.34■■□□□ 1.17
COL16A1-217ENST00000532877 EHBP1L1Q8N3D4 1523 aa22.33■■□□□ 1.17
COL16A1-217ENST00000532877 MTUS2Q5JR59 1369 aa22.31■■□□□ 1.16
COL16A1-217ENST00000532877 KANK4Q5T7N3 995 aaPredicted RBP22.31■■□□□ 1.16
COL16A1-217ENST00000532877 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
COL16A1-217ENST00000532877 TROQ12816 1431 aaPredicted RBP22.3■■□□□ 1.16
COL16A1-217ENST00000532877 WDR7Q9Y4E6 1490 aa22.28■■□□□ 1.16
COL16A1-217ENST00000532877 PLEKHD1A6NEE1 506 aa22.26■■□□□ 1.15
COL16A1-217ENST00000532877 SUPT6HQ7KZ85 1726 aaKnown RBP22.24■■□□□ 1.15
COL16A1-217ENST00000532877 PPARGC1BQ86YN6 1023 aaKnown RBP22.24■■□□□ 1.15
COL16A1-217ENST00000532877 KIF14Q15058 1648 aa22.24■■□□□ 1.15
COL16A1-217ENST00000532877 NCOA2Q15596 1464 aa22.18■■□□□ 1.14
COL16A1-217ENST00000532877 FBXO41Q8TF61 875 aa22.15■■□□□ 1.14
COL16A1-217ENST00000532877 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
COL16A1-217ENST00000532877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.15■■□□□ 1.14
COL16A1-217ENST00000532877 KCNH8Q96L42 1107 aa22.14■■□□□ 1.13
COL16A1-217ENST00000532877 CD109Q6YHK3 1445 aa22.14■■□□□ 1.13
COL16A1-217ENST00000532877 ADAMTSL3P82987 1691 aa22.12■■□□□ 1.13
COL16A1-217ENST00000532877 ABCA9Q8IUA7 1624 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms