RNA–Protein interactions for RNA: ENST00000532781.1

ARID1A-208, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 1 (best)

Gene ARID1A, Length 2,583 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-208ENST00000532781 FHOD3Q2V2M9 1422 aa21.42■■□□□ 1.02
ARID1A-208ENST00000532781 ATP1B4Q9UN42 357 aaPredicted RBP21.42■■□□□ 1.02
ARID1A-208ENST00000532781 CTTNBP2Q8WZ74 1663 aa21.42■■□□□ 1.02
ARID1A-208ENST00000532781 PBRM1Q86U86 1689 aa21.41■■□□□ 1.02
ARID1A-208ENST00000532781 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
ARID1A-208ENST00000532781 WDR62O43379 1518 aa21.37■■□□□ 1.01
ARID1A-208ENST00000532781 PCF11O94913 1555 aaKnown RBP21.32■■□□□ 1
ARID1A-208ENST00000532781 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
ARID1A-208ENST00000532781 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
ARID1A-208ENST00000532781 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
ARID1A-208ENST00000532781 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
ARID1A-208ENST00000532781 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
ARID1A-208ENST00000532781 TIAM1Q13009 1591 aa21.24■□□□□ 0.99
ARID1A-208ENST00000532781 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
ARID1A-208ENST00000532781 ITGAEP38570 1179 aa21.22■□□□□ 0.99
ARID1A-208ENST00000532781 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
ARID1A-208ENST00000532781 SNAPC4Q5SXM2 1469 aa21.21■□□□□ 0.99
ARID1A-208ENST00000532781 EFCAB5A4FU69 1503 aa21.19■□□□□ 0.98
ARID1A-208ENST00000532781 SAMD9Q5K651 1589 aa21.16■□□□□ 0.98
ARID1A-208ENST00000532781 FBLN2P98095 1184 aa21.16■□□□□ 0.98
ARID1A-208ENST00000532781 LRRIQ1Q96JM4 1722 aa21.15■□□□□ 0.98
ARID1A-208ENST00000532781 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
ARID1A-208ENST00000532781 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
ARID1A-208ENST00000532781 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
ARID1A-208ENST00000532781 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
ARID1A-208ENST00000532781 IQGAP2Q13576 1575 aa21.11■□□□□ 0.97
ARID1A-208ENST00000532781 CASKIN1Q8WXD9 1431 aa21.1■□□□□ 0.97
ARID1A-208ENST00000532781 FYCO1Q9BQS8 1478 aa21.09■□□□□ 0.97
ARID1A-208ENST00000532781 RRBP1Q9P2E9 1410 aaKnown RBP21.08■□□□□ 0.97
ARID1A-208ENST00000532781 CCNB3Q8WWL7 1395 aa21.08■□□□□ 0.96
ARID1A-208ENST00000532781 FMN1Q68DA7 1419 aa21.07■□□□□ 0.96
ARID1A-208ENST00000532781 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
ARID1A-208ENST00000532781 MAP3K1Q13233 1512 aa21.04■□□□□ 0.96
ARID1A-208ENST00000532781 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
ARID1A-208ENST00000532781 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
ARID1A-208ENST00000532781 CEP170Q5SW79 1584 aa20.98■□□□□ 0.95
ARID1A-208ENST00000532781 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.95
ARID1A-208ENST00000532781 MAGI1Q96QZ7 1491 aaPredicted RBP20.95■□□□□ 0.94
ARID1A-208ENST00000532781 MAGI3Q5TCQ9 1506 aa20.94■□□□□ 0.94
ARID1A-208ENST00000532781 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
ARID1A-208ENST00000532781 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
ARID1A-208ENST00000532781 DISP1Q96F81 1524 aa20.94■□□□□ 0.94
ARID1A-208ENST00000532781 KIAA0586Q9BVV6 1533 aa20.93■□□□□ 0.94
ARID1A-208ENST00000532781 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
ARID1A-208ENST00000532781 KIAA0556O60303 1618 aa20.91■□□□□ 0.94
ARID1A-208ENST00000532781 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
ARID1A-208ENST00000532781 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
ARID1A-208ENST00000532781 EPRSP07814 1512 aaKnown RBP20.85■□□□□ 0.93
ARID1A-208ENST00000532781 HECW1Q76N89 1606 aa20.85■□□□□ 0.93
ARID1A-208ENST00000532781 RAB3GAP2Q9H2M9 1393 aa20.83■□□□□ 0.92
ARID1A-208ENST00000532781 FGD6Q6ZV73 1430 aa20.81■□□□□ 0.92
ARID1A-208ENST00000532781 JPH4Q96JJ6 628 aa20.81■□□□□ 0.92
ARID1A-208ENST00000532781 SUPT6HQ7KZ85 1726 aaKnown RBP20.79■□□□□ 0.92
ARID1A-208ENST00000532781 NUP160Q12769 1436 aa20.79■□□□□ 0.92
ARID1A-208ENST00000532781 PLB1Q6P1J6 1458 aa20.79■□□□□ 0.92
ARID1A-208ENST00000532781 CHD1O14646 1710 aa20.78■□□□□ 0.92
ARID1A-208ENST00000532781 EHBP1L1Q8N3D4 1523 aa20.78■□□□□ 0.92
ARID1A-208ENST00000532781 NUP153P49790 1475 aaKnown RBP20.77■□□□□ 0.91
ARID1A-208ENST00000532781 CCDC18Q5T9S5 1454 aa20.76■□□□□ 0.91
ARID1A-208ENST00000532781 PTPRKQ15262 1439 aa20.75■□□□□ 0.91
ARID1A-208ENST00000532781 RAPGEF6Q8TEU7 1601 aa20.75■□□□□ 0.91
ARID1A-208ENST00000532781 MYOM3Q5VTT5 1437 aa20.73■□□□□ 0.91
ARID1A-208ENST00000532781 SETD5Q9C0A6 1442 aa20.72■□□□□ 0.91
ARID1A-208ENST00000532781 CHIC2Q9UKJ5 165 aa20.69■□□□□ 0.9
ARID1A-208ENST00000532781 PTPN23Q9H3S7 1636 aa20.68■□□□□ 0.9
ARID1A-208ENST00000532781 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
ARID1A-208ENST00000532781 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
ARID1A-208ENST00000532781 CARMIL2Q6F5E8 1435 aa20.65■□□□□ 0.9
ARID1A-208ENST00000532781 MAPKBP1O60336 1514 aa20.64■□□□□ 0.89
ARID1A-208ENST00000532781 ZNF644Q9H582 1327 aaPredicted RBP20.64■□□□□ 0.89
ARID1A-208ENST00000532781 RRP7BPQ9NSQ0 103 aa20.62■□□□□ 0.89
ARID1A-208ENST00000532781 ERCC6L2Q5T890 1561 aa20.61■□□□□ 0.89
ARID1A-208ENST00000532781 SIN3AQ96ST3 1273 aa20.6■□□□□ 0.89
ARID1A-208ENST00000532781 KIF14Q15058 1648 aa20.59■□□□□ 0.89
ARID1A-208ENST00000532781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.59■□□□□ 0.89
ARID1A-208ENST00000532781 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
ARID1A-208ENST00000532781 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
ARID1A-208ENST00000532781 DIEXFQ68CQ4 756 aaKnown RBP20.56■□□□□ 0.88
ARID1A-208ENST00000532781 ABCA8O94911 1581 aa20.53■□□□□ 0.88
ARID1A-208ENST00000532781 ZNF777Q9ULD5 760 aaPredicted RBP20.53■□□□□ 0.88
ARID1A-208ENST00000532781 CLSPNQ9HAW4 1339 aa20.53■□□□□ 0.88
ARID1A-208ENST00000532781 NAIPQ13075 1403 aa20.53■□□□□ 0.88
ARID1A-208ENST00000532781 KDM6BO15054 1643 aa20.52■□□□□ 0.88
ARID1A-208ENST00000532781 PTPRGP23470 1445 aa20.51■□□□□ 0.87
ARID1A-208ENST00000532781 TCOF1Q13428 1488 aaKnown RBP20.51■□□□□ 0.87
ARID1A-208ENST00000532781 CDK11AQ9UQ88 783 aaPredicted RBP20.51■□□□□ 0.87
ARID1A-208ENST00000532781 HFM1A2PYH4 1435 aa20.5■□□□□ 0.87
ARID1A-208ENST00000532781 TROQ12816 1431 aaPredicted RBP20.5■□□□□ 0.87
ARID1A-208ENST00000532781 ATP10BO94823 1461 aa20.5■□□□□ 0.87
ARID1A-208ENST00000532781 MIA2Q96PC5 1412 aa20.45■□□□□ 0.86
ARID1A-208ENST00000532781 SHROOM2Q13796 1616 aa20.44■□□□□ 0.86
ARID1A-208ENST00000532781 CFDP1Q9UEE9 299 aaPredicted RBP20.44■□□□□ 0.86
ARID1A-208ENST00000532781 PLEKHD1A6NEE1 506 aa20.43■□□□□ 0.86
ARID1A-208ENST00000532781 GPATCH8Q9UKJ3 1502 aaKnown RBP20.43■□□□□ 0.86
ARID1A-208ENST00000532781 DAPK1P53355 1430 aa20.41■□□□□ 0.86
ARID1A-208ENST00000532781 ABCC5O15440 1437 aa20.41■□□□□ 0.86
ARID1A-208ENST00000532781 TRIM52Q96A61 297 aa20.41■□□□□ 0.86
ARID1A-208ENST00000532781 CAMSAP2Q08AD1 1489 aa20.4■□□□□ 0.86
ARID1A-208ENST00000532781 CDC42BPAQ5VT25 1732 aa20.39■□□□□ 0.86
ARID1A-208ENST00000532781 ADCY10Q96PN6 1610 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms