RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 KIF13AQ9H1H9 1805 aa30.21■■■□□ 2.43
CTSB-226ENST00000532656 IGF1RP08069 1367 aa30.16■■■□□ 2.42
CTSB-226ENST00000532656 KIF27Q86VH2 1401 aa30.15■■■□□ 2.42
CTSB-226ENST00000532656 CUL7Q14999 1698 aa30.13■■■□□ 2.41
CTSB-226ENST00000532656 KIAA0586Q9BVV6 1533 aa30.12■■■□□ 2.41
CTSB-226ENST00000532656 ADCY10Q96PN6 1610 aa30.08■■■□□ 2.41
CTSB-226ENST00000532656 NPM1P06748 294 aaKnown RBP eCLIP30.07■■■□□ 2.4
CTSB-226ENST00000532656 MAPKBP1O60336 1514 aa30.03■■■□□ 2.4
CTSB-226ENST00000532656 FAM69CQ0P6D2 419 aa30.03■■■□□ 2.4
CTSB-226ENST00000532656 ABCC10Q5T3U5 1492 aa30.03■■■□□ 2.4
CTSB-226ENST00000532656 DIP2BQ9P265 1576 aa29.98■■■□□ 2.39
CTSB-226ENST00000532656 CARMIL1Q5VZK9 1371 aa29.97■■■□□ 2.39
CTSB-226ENST00000532656 TTBK1Q5TCY1 1321 aaPredicted RBP29.89■■■□□ 2.38
CTSB-226ENST00000532656 PTPRGP23470 1445 aa29.88■■■□□ 2.37
CTSB-226ENST00000532656 IQGAP2Q13576 1575 aa29.83■■■□□ 2.37
CTSB-226ENST00000532656 CARMIL2Q6F5E8 1435 aa29.83■■■□□ 2.37
CTSB-226ENST00000532656 TNIKQ9UKE5 1360 aa29.81■■■□□ 2.36
CTSB-226ENST00000532656 TSPOAP1O95153 1857 aa29.81■■■□□ 2.36
CTSB-226ENST00000532656 KDM6BO15054 1643 aa29.77■■■□□ 2.36
CTSB-226ENST00000532656 ABCC2Q92887 1545 aa29.75■■■□□ 2.35
CTSB-226ENST00000532656 DISP1Q96F81 1524 aa29.7■■■□□ 2.34
CTSB-226ENST00000532656 RAPGEF2Q9Y4G8 1499 aa29.68■■■□□ 2.34
CTSB-226ENST00000532656 ASXL2Q76L83 1435 aa29.67■■■□□ 2.34
CTSB-226ENST00000532656 UHRF1BP1LA0JNW5 1464 aa29.65■■■□□ 2.34
CTSB-226ENST00000532656 UACAQ9BZF9 1416 aa29.64■■■□□ 2.34
CTSB-226ENST00000532656 PLB1Q6P1J6 1458 aa29.63■■■□□ 2.33
CTSB-226ENST00000532656 UGGT2Q9NYU1 1516 aa29.61■■■□□ 2.33
CTSB-226ENST00000532656 GLI2P10070 1586 aa29.57■■■□□ 2.32
CTSB-226ENST00000532656 PPRC1Q5VV67 1664 aaKnown RBP29.56■■■□□ 2.32
CTSB-226ENST00000532656 KIAA0556O60303 1618 aa29.56■■■□□ 2.32
CTSB-226ENST00000532656 KDM5BQ9UGL1 1544 aa29.53■■■□□ 2.32
CTSB-226ENST00000532656 KDM4FA0A1W2PPD8 638 aa29.52■■■□□ 2.32
CTSB-226ENST00000532656 ZCCHC11Q5TAX3 1644 aaKnown RBP29.51■■■□□ 2.31
CTSB-226ENST00000532656 EPRSP07814 1512 aaKnown RBP29.49■■■□□ 2.31
CTSB-226ENST00000532656 CTTNBP2Q8WZ74 1663 aa29.48■■■□□ 2.31
CTSB-226ENST00000532656 MAP3K4Q9Y6R4 1608 aa29.43■■■□□ 2.3
CTSB-226ENST00000532656 COL17A1Q9UMD9 1497 aaPredicted RBP29.37■■■□□ 2.29
CTSB-226ENST00000532656 GOLGA3Q08378 1498 aa29.36■■■□□ 2.29
CTSB-226ENST00000532656 WDR7Q9Y4E6 1490 aa29.36■■■□□ 2.29
CTSB-226ENST00000532656 TEX14Q8IWB6 1497 aa29.35■■■□□ 2.29
CTSB-226ENST00000532656 PRXQ9BXM0 1461 aa29.33■■■□□ 2.29
CTSB-226ENST00000532656 ABCA8O94911 1581 aa29.3■■■□□ 2.28
CTSB-226ENST00000532656 ADGRL1O94910 1474 aa29.27■■■□□ 2.28
CTSB-226ENST00000532656 KCNH8Q96L42 1107 aa29.21■■■□□ 2.27
CTSB-226ENST00000532656 CD109Q6YHK3 1445 aa29.19■■■□□ 2.26
CTSB-226ENST00000532656 CFAP43Q8NDM7 1665 aa29.18■■■□□ 2.26
CTSB-226ENST00000532656 MAGI3Q5TCQ9 1506 aa29.15■■■□□ 2.26
CTSB-226ENST00000532656 P3H3Q8IVL6 736 aa29.14■■■□□ 2.26
CTSB-226ENST00000532656 ARID3CA6NKF2 412 aa29.12■■■□□ 2.25
CTSB-226ENST00000532656 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
CTSB-226ENST00000532656 ATP10BO94823 1461 aa29.05■■■□□ 2.24
CTSB-226ENST00000532656 CSRNP3Q8WYN3 585 aa29.05■■■□□ 2.24
CTSB-226ENST00000532656 SAMD9Q5K651 1589 aa29.02■■■□□ 2.24
CTSB-226ENST00000532656 RAPGEF6Q8TEU7 1601 aa28.97■■■□□ 2.23
CTSB-226ENST00000532656 ABCA9Q8IUA7 1624 aa28.94■■■□□ 2.22
CTSB-226ENST00000532656 HECW2Q9P2P5 1572 aa28.93■■■□□ 2.22
CTSB-226ENST00000532656 KIF21BO75037 1637 aa28.93■■■□□ 2.22
CTSB-226ENST00000532656 ARAP3Q8WWN8 1544 aa28.93■■■□□ 2.22
CTSB-226ENST00000532656 RANGAP1P46060 587 aaPredicted RBP28.92■■■□□ 2.22
CTSB-226ENST00000532656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.89■■■□□ 2.22
CTSB-226ENST00000532656 HNRNPUL2Q1KMD3 747 aaKnown RBP28.89■■■□□ 2.22
CTSB-226ENST00000532656 EEA1Q15075 1411 aa28.88■■■□□ 2.21
CTSB-226ENST00000532656 FHOD3Q2V2M9 1422 aa28.86■■■□□ 2.21
CTSB-226ENST00000532656 NUP153P49790 1475 aaKnown RBP28.85■■■□□ 2.21
CTSB-226ENST00000532656 PHLDB1Q86UU1 1377 aa28.82■■■□□ 2.2
CTSB-226ENST00000532656 ILDR1Q86SU0 546 aaPredicted RBP28.8■■■□□ 2.2
CTSB-226ENST00000532656 RAPGEF3O95398 923 aa28.79■■■□□ 2.2
CTSB-226ENST00000532656 NEO1Q92859 1461 aa28.78■■■□□ 2.2
CTSB-226ENST00000532656 FRMPD1Q5SYB0 1578 aa28.73■■■□□ 2.19
CTSB-226ENST00000532656 EFCAB5A4FU69 1503 aa28.69■■■□□ 2.18
CTSB-226ENST00000532656 PLEKHD1A6NEE1 506 aa28.69■■■□□ 2.18
CTSB-226ENST00000532656 ADAMTSL3P82987 1691 aa28.67■■■□□ 2.18
CTSB-226ENST00000532656 PTPRMP28827 1452 aa28.63■■■□□ 2.17
CTSB-226ENST00000532656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.63■■■□□ 2.175e-6■□□□□ 9.5
CTSB-226ENST00000532656 ARID4BQ4LE39 1312 aaPredicted RBP28.61■■■□□ 2.17
CTSB-226ENST00000532656 BCORL1Q5H9F3 1711 aa28.6■■■□□ 2.17
CTSB-226ENST00000532656 FANCAO15360 1455 aa28.6■■■□□ 2.17
CTSB-226ENST00000532656 TTC37Q6PGP7 1564 aa28.6■■■□□ 2.17
CTSB-226ENST00000532656 EHMT2Q96KQ7 1210 aa28.6■■■□□ 2.17
CTSB-226ENST00000532656 RICTORQ6R327 1708 aa28.6■■■□□ 2.17
CTSB-226ENST00000532656 AKNAQ7Z591 1439 aa28.6■■■□□ 2.17
CTSB-226ENST00000532656 DENND4BO75064 1496 aaPredicted RBP28.59■■■□□ 2.17
CTSB-226ENST00000532656 CDK13Q14004 1512 aaKnown RBP28.59■■■□□ 2.17
CTSB-226ENST00000532656 ARHGEF40Q8TER5 1519 aa28.59■■■□□ 2.17
CTSB-226ENST00000532656 CFAP74Q9C0B2 1584 aa28.58■■■□□ 2.17
CTSB-226ENST00000532656 MADDQ8WXG6 1647 aa28.56■■■□□ 2.16
CTSB-226ENST00000532656 UBTFP17480 764 aaKnown RBP28.51■■■□□ 2.15
CTSB-226ENST00000532656 ATP1B4Q9UN42 357 aaPredicted RBP28.48■■■□□ 2.15
CTSB-226ENST00000532656 ZMYM4Q5VZL5 1548 aa28.47■■■□□ 2.15
CTSB-226ENST00000532656 RIMS1Q86UR5 1692 aaKnown RBP28.46■■■□□ 2.15
CTSB-226ENST00000532656 HECW1Q76N89 1606 aa28.45■■■□□ 2.14
CTSB-226ENST00000532656 YEATS2Q9ULM3 1422 aa28.44■■■□□ 2.14
CTSB-226ENST00000532656 ZFYVE16Q7Z3T8 1539 aa28.44■■■□□ 2.14
CTSB-226ENST00000532656 ARHGAP35Q9NRY4 1499 aa28.44■■■□□ 2.14
CTSB-226ENST00000532656 FMN1Q68DA7 1419 aa28.43■■■□□ 2.14
CTSB-226ENST00000532656 PLCH2O75038 1416 aa28.42■■■□□ 2.14
CTSB-226ENST00000532656 PCF11O94913 1555 aaKnown RBP28.41■■■□□ 2.14
CTSB-226ENST00000532656 SIGLEC1Q9BZZ2 1709 aa28.41■■■□□ 2.14
CTSB-226ENST00000532656 CHIC1Q5VXU3 224 aa28.39■■■□□ 2.14
CTSB-226ENST00000532656 SCAPERQ9BY12 1400 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms