RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 TRHP20396 242 aaPredicted RBP27.32■■□□□ 1.96
LDLRAD3-205ENST00000532490 PRG4Q92954 1404 aaPredicted RBP27.31■■□□□ 1.96
LDLRAD3-205ENST00000532490 CARMIL1Q5VZK9 1371 aa27.26■■□□□ 1.95
LDLRAD3-205ENST00000532490 KIAA0586Q9BVV6 1533 aa27.25■■□□□ 1.95
LDLRAD3-205ENST00000532490 RAPGEF2Q9Y4G8 1499 aa27.04■■□□□ 1.92
LDLRAD3-205ENST00000532490 IQGAP2Q13576 1575 aa27■■□□□ 1.91
LDLRAD3-205ENST00000532490 ADCY10Q96PN6 1610 aa26.96■■□□□ 1.91
LDLRAD3-205ENST00000532490 CARMIL2Q6F5E8 1435 aa26.92■■□□□ 1.9
LDLRAD3-205ENST00000532490 PTPRGP23470 1445 aa26.91■■□□□ 1.9
LDLRAD3-205ENST00000532490 TNIKQ9UKE5 1360 aa26.9■■□□□ 1.9
LDLRAD3-205ENST00000532490 DISP1Q96F81 1524 aa26.9■■□□□ 1.9
LDLRAD3-205ENST00000532490 KIF13AQ9H1H9 1805 aa26.88■■□□□ 1.89
LDLRAD3-205ENST00000532490 UGGT2Q9NYU1 1516 aa26.88■■□□□ 1.89
LDLRAD3-205ENST00000532490 PRXQ9BXM0 1461 aa26.87■■□□□ 1.89
LDLRAD3-205ENST00000532490 MAPKBP1O60336 1514 aa26.87■■□□□ 1.89
LDLRAD3-205ENST00000532490 NPM1P06748 294 aaKnown RBP eCLIP26.87■■□□□ 1.89
LDLRAD3-205ENST00000532490 ABCC10Q5T3U5 1492 aa26.81■■□□□ 1.88
LDLRAD3-205ENST00000532490 TTBK1Q5TCY1 1321 aaPredicted RBP26.8■■□□□ 1.88
LDLRAD3-205ENST00000532490 CTTNBP2Q8WZ74 1663 aa26.78■■□□□ 1.88
LDLRAD3-205ENST00000532490 KIAA0556O60303 1618 aa26.76■■□□□ 1.87
LDLRAD3-205ENST00000532490 UHRF1BP1LA0JNW5 1464 aa26.75■■□□□ 1.87
LDLRAD3-205ENST00000532490 FAM69CQ0P6D2 419 aa26.75■■□□□ 1.87
LDLRAD3-205ENST00000532490 DIP2BQ9P265 1576 aa26.75■■□□□ 1.87
LDLRAD3-205ENST00000532490 ABCC2Q92887 1545 aa26.75■■□□□ 1.87
LDLRAD3-205ENST00000532490 UACAQ9BZF9 1416 aa26.73■■□□□ 1.87
LDLRAD3-205ENST00000532490 CSRNP3Q8WYN3 585 aa26.72■■□□□ 1.87
LDLRAD3-205ENST00000532490 GOLGA3Q08378 1498 aa26.64■■□□□ 1.86
LDLRAD3-205ENST00000532490 EEA1Q15075 1411 aa26.64■■□□□ 1.85
LDLRAD3-205ENST00000532490 KDM5BQ9UGL1 1544 aa26.63■■□□□ 1.85
LDLRAD3-205ENST00000532490 ASXL2Q76L83 1435 aa26.62■■□□□ 1.85
LDLRAD3-205ENST00000532490 PLB1Q6P1J6 1458 aa26.6■■□□□ 1.85
LDLRAD3-205ENST00000532490 ZCCHC11Q5TAX3 1644 aaKnown RBP26.54■■□□□ 1.84
LDLRAD3-205ENST00000532490 GLI2P10070 1586 aa26.53■■□□□ 1.84
LDLRAD3-205ENST00000532490 ABCA8O94911 1581 aa26.52■■□□□ 1.84
LDLRAD3-205ENST00000532490 CHIC1Q5VXU3 224 aa26.52■■□□□ 1.84
LDLRAD3-205ENST00000532490 TSPOAP1O95153 1857 aa26.51■■□□□ 1.83
LDLRAD3-205ENST00000532490 FAM9AQ8IZU1 332 aaPredicted RBP26.49■■□□□ 1.83
LDLRAD3-205ENST00000532490 EPRSP07814 1512 aaKnown RBP26.47■■□□□ 1.83
LDLRAD3-205ENST00000532490 SAMD9Q5K651 1589 aa26.46■■□□□ 1.83
LDLRAD3-205ENST00000532490 P3H3Q8IVL6 736 aa26.44■■□□□ 1.82
LDLRAD3-205ENST00000532490 PPRC1Q5VV67 1664 aaKnown RBP26.44■■□□□ 1.82
LDLRAD3-205ENST00000532490 KIF21BO75037 1637 aa26.42■■□□□ 1.82
LDLRAD3-205ENST00000532490 WDR7Q9Y4E6 1490 aa26.4■■□□□ 1.82
LDLRAD3-205ENST00000532490 KDM6BO15054 1643 aa26.39■■□□□ 1.82
LDLRAD3-205ENST00000532490 MAP3K4Q9Y6R4 1608 aa26.39■■□□□ 1.81
LDLRAD3-205ENST00000532490 ATP10BO94823 1461 aa26.31■■□□□ 1.8
LDLRAD3-205ENST00000532490 RANGAP1P46060 587 aaPredicted RBP26.28■■□□□ 1.8
LDLRAD3-205ENST00000532490 RAPGEF6Q8TEU7 1601 aa26.26■■□□□ 1.79
LDLRAD3-205ENST00000532490 FHOD3Q2V2M9 1422 aa26.26■■□□□ 1.79
LDLRAD3-205ENST00000532490 KCNH8Q96L42 1107 aa26.26■■□□□ 1.79
LDLRAD3-205ENST00000532490 COL17A1Q9UMD9 1497 aaPredicted RBP26.25■■□□□ 1.79
LDLRAD3-205ENST00000532490 TEX14Q8IWB6 1497 aa26.24■■□□□ 1.79
LDLRAD3-205ENST00000532490 ARID3CA6NKF2 412 aa26.24■■□□□ 1.79
LDLRAD3-205ENST00000532490 AEBP2Q6ZN18 517 aaPredicted RBP26.24■■□□□ 1.79
LDLRAD3-205ENST00000532490 CFAP43Q8NDM7 1665 aa26.22■■□□□ 1.79
LDLRAD3-205ENST00000532490 EFCAB5A4FU69 1503 aa26.22■■□□□ 1.79
LDLRAD3-205ENST00000532490 CD109Q6YHK3 1445 aa26.21■■□□□ 1.79
LDLRAD3-205ENST00000532490 NUP153P49790 1475 aaKnown RBP26.2■■□□□ 1.78
LDLRAD3-205ENST00000532490 MAGI3Q5TCQ9 1506 aa26.19■■□□□ 1.78
LDLRAD3-205ENST00000532490 UBTFP17480 764 aaKnown RBP26.17■■□□□ 1.78
LDLRAD3-205ENST00000532490 EHMT2Q96KQ7 1210 aa26.16■■□□□ 1.78
LDLRAD3-205ENST00000532490 ABCA9Q8IUA7 1624 aa26.1■■□□□ 1.77
LDLRAD3-205ENST00000532490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.08■■□□□ 1.77
LDLRAD3-205ENST00000532490 HNRNPUL2Q1KMD3 747 aaKnown RBP26.08■■□□□ 1.77
LDLRAD3-205ENST00000532490 ARHGAP35Q9NRY4 1499 aa26.07■■□□□ 1.76
LDLRAD3-205ENST00000532490 KDM4FA0A1W2PPD8 638 aa26.07■■□□□ 1.76
LDLRAD3-205ENST00000532490 PLEKHD1A6NEE1 506 aa26■■□□□ 1.75
LDLRAD3-205ENST00000532490 ARAP3Q8WWN8 1544 aa25.99■■□□□ 1.75
LDLRAD3-205ENST00000532490 FMN1Q68DA7 1419 aa25.98■■□□□ 1.75
LDLRAD3-205ENST00000532490 PHLDB1Q86UU1 1377 aa25.95■■□□□ 1.75
LDLRAD3-205ENST00000532490 CDK13Q14004 1512 aaKnown RBP25.95■■□□□ 1.74
LDLRAD3-205ENST00000532490 NEO1Q92859 1461 aa25.92■■□□□ 1.74
LDLRAD3-205ENST00000532490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.9■■□□□ 1.74
LDLRAD3-205ENST00000532490 HECW1Q76N89 1606 aa25.9■■□□□ 1.74
LDLRAD3-205ENST00000532490 ADGRL1O94910 1474 aa25.89■■□□□ 1.73
LDLRAD3-205ENST00000532490 ATP1B4Q9UN42 357 aaPredicted RBP25.85■■□□□ 1.73
LDLRAD3-205ENST00000532490 TTC37Q6PGP7 1564 aa25.85■■□□□ 1.73
LDLRAD3-205ENST00000532490 RAPGEF3O95398 923 aa25.82■■□□□ 1.72
LDLRAD3-205ENST00000532490 LRRIQ1Q96JM4 1722 aa25.8■■□□□ 1.72
LDLRAD3-205ENST00000532490 FRMPD1Q5SYB0 1578 aa25.79■■□□□ 1.72
LDLRAD3-205ENST00000532490 AKNAQ7Z591 1439 aa25.78■■□□□ 1.72
LDLRAD3-205ENST00000532490 FANCAO15360 1455 aa25.78■■□□□ 1.72
LDLRAD3-205ENST00000532490 CDK11AQ9UQ88 783 aaPredicted RBP25.77■■□□□ 1.72
LDLRAD3-205ENST00000532490 CASKIN1Q8WXD9 1431 aa25.76■■□□□ 1.71
LDLRAD3-205ENST00000532490 PLCH2O75038 1416 aa25.75■■□□□ 1.71
LDLRAD3-205ENST00000532490 CFAP74Q9C0B2 1584 aa25.74■■□□□ 1.71
LDLRAD3-205ENST00000532490 PCF11O94913 1555 aaKnown RBP25.73■■□□□ 1.71
LDLRAD3-205ENST00000532490 CLIP1P30622 1438 aa25.73■■□□□ 1.71
LDLRAD3-205ENST00000532490 TROQ12816 1431 aaPredicted RBP25.73■■□□□ 1.71
LDLRAD3-205ENST00000532490 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
LDLRAD3-205ENST00000532490 RICTORQ6R327 1708 aa25.71■■□□□ 1.71
LDLRAD3-205ENST00000532490 KIF14Q15058 1648 aa25.71■■□□□ 1.71
LDLRAD3-205ENST00000532490 CCDC18Q5T9S5 1454 aa25.67■■□□□ 1.7
LDLRAD3-205ENST00000532490 MYO5CQ9NQX4 1742 aa25.66■■□□□ 1.7
LDLRAD3-205ENST00000532490 FYCO1Q9BQS8 1478 aa25.65■■□□□ 1.7
LDLRAD3-205ENST00000532490 ZMYM4Q5VZL5 1548 aa25.63■■□□□ 1.69
LDLRAD3-205ENST00000532490 EFCAB2Q5VUJ9 269 aa25.62■■□□□ 1.69
LDLRAD3-205ENST00000532490 SCAPERQ9BY12 1400 aa25.62■■□□□ 1.69
LDLRAD3-205ENST00000532490 ARHGEF40Q8TER5 1519 aa25.6■■□□□ 1.69
LDLRAD3-205ENST00000532490 POGZQ7Z3K3 1410 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms