RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
CHEK1-213ENST00000532449 BAZ1BQ9UIG0 1483 aaKnown RBP14.87□□□□□ -0.03
CHEK1-213ENST00000532449 CCDC136Q96JN2 1154 aa14.86□□□□□ -0.03
CHEK1-213ENST00000532449 ANP32AP39687 249 aaKnown RBP14.84□□□□□ -0.03
CHEK1-213ENST00000532449 ZNF777Q9ULD5 760 aaPredicted RBP14.83□□□□□ -0.03
CHEK1-213ENST00000532449 LAS1LQ9Y4W2 734 aaKnown RBP14.83□□□□□ -0.03
CHEK1-213ENST00000532449 FOXD1Q16676 465 aa14.82□□□□□ -0.04
CHEK1-213ENST00000532449 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
CHEK1-213ENST00000532449 SLC4A1APQ9BWU0 796 aaKnown RBP14.8□□□□□ -0.04
CHEK1-213ENST00000532449 DEKP35659 375 aaKnown RBP14.78□□□□□ -0.04
CHEK1-213ENST00000532449 DHX57Q6P158 1386 aaKnown RBP14.78□□□□□ -0.04
CHEK1-213ENST00000532449 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.05
CHEK1-213ENST00000532449 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
CHEK1-213ENST00000532449 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
CHEK1-213ENST00000532449 RAB3GAP2Q9H2M9 1393 aa14.73□□□□□ -0.05
CHEK1-213ENST00000532449 VPS8Q8N3P4 1428 aa14.73□□□□□ -0.05
CHEK1-213ENST00000532449 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
CHEK1-213ENST00000532449 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
CHEK1-213ENST00000532449 RAPGEF2Q9Y4G8 1499 aa14.71□□□□□ -0.05
CHEK1-213ENST00000532449 MYT1LQ9UL68 1186 aa14.71□□□□□ -0.06
CHEK1-213ENST00000532449 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
CHEK1-213ENST00000532449 FBLN2P98095 1184 aa14.69□□□□□ -0.06
CHEK1-213ENST00000532449 TMC1Q8TDI8 760 aa14.69□□□□□ -0.06
CHEK1-213ENST00000532449 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
CHEK1-213ENST00000532449 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
CHEK1-213ENST00000532449 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHEK1-213ENST00000532449 NOP58Q9Y2X3 529 aaKnown RBP14.64□□□□□ -0.07
CHEK1-213ENST00000532449 EEA1Q15075 1411 aa14.63□□□□□ -0.07
CHEK1-213ENST00000532449 HSPA5P11021 654 aaKnown RBP14.63□□□□□ -0.07
CHEK1-213ENST00000532449 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
CHEK1-213ENST00000532449 MTUS2Q5JR59 1369 aa14.62□□□□□ -0.07
CHEK1-213ENST00000532449 PPP4R2Q9NY27 417 aa14.62□□□□□ -0.07
CHEK1-213ENST00000532449 MSH5O43196 834 aa14.61□□□□□ -0.07
CHEK1-213ENST00000532449 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
CHEK1-213ENST00000532449 PPP1R15AO75807 674 aaPredicted RBP14.59□□□□□ -0.07
CHEK1-213ENST00000532449 NEFMP07197 916 aa14.58□□□□□ -0.08
CHEK1-213ENST00000532449 CCDC184Q52MB2 194 aa14.57□□□□□ -0.08
CHEK1-213ENST00000532449 SMARCA2P51531 1590 aa14.56□□□□□ -0.08
CHEK1-213ENST00000532449 RGL3Q3MIN7 710 aa14.56□□□□□ -0.08
CHEK1-213ENST00000532449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.082e-7■■□□□ 11.9
CHEK1-213ENST00000532449 SLC4A3P48751 1232 aa14.53□□□□□ -0.08
CHEK1-213ENST00000532449 PAK3O75914 559 aaPredicted RBP14.53□□□□□ -0.08
CHEK1-213ENST00000532449 SETD5Q9C0A6 1442 aa14.52□□□□□ -0.08
CHEK1-213ENST00000532449 RGS3P49796 1198 aa14.51□□□□□ -0.09
CHEK1-213ENST00000532449 CANXP27824 592 aaKnown RBP14.5□□□□□ -0.09
CHEK1-213ENST00000532449 CCER2I3L3R5 266 aa14.49□□□□□ -0.09
CHEK1-213ENST00000532449 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
CHEK1-213ENST00000532449 CC2D2AQ9P2K1 1620 aa14.48□□□□□ -0.09
CHEK1-213ENST00000532449 NCAPD3P42695 1498 aa14.46□□□□□ -0.09
CHEK1-213ENST00000532449 CC2D1BQ5T0F9 858 aaKnown RBP14.46□□□□□ -0.1
CHEK1-213ENST00000532449 L3MBTL2Q969R5 705 aa14.45□□□□□ -0.1
CHEK1-213ENST00000532449 SKAP1Q86WV1 359 aa14.44□□□□□ -0.1
CHEK1-213ENST00000532449 PLIN1O60240 522 aa14.44□□□□□ -0.1
CHEK1-213ENST00000532449 KIF27Q86VH2 1401 aa14.44□□□□□ -0.1
CHEK1-213ENST00000532449 IL27Q8NEV9 243 aa14.43□□□□□ -0.1
CHEK1-213ENST00000532449 ARID4BQ4LE39 1312 aaPredicted RBP14.42□□□□□ -0.1
CHEK1-213ENST00000532449 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
CHEK1-213ENST00000532449 SPRYD3Q8NCJ5 442 aa14.41□□□□□ -0.1
CHEK1-213ENST00000532449 NEUROD2Q15784 382 aa14.4□□□□□ -0.1
CHEK1-213ENST00000532449 CUX2O14529 1486 aa14.4□□□□□ -0.1
CHEK1-213ENST00000532449 CARD11Q9BXL7 1154 aa14.38□□□□□ -0.11
CHEK1-213ENST00000532449 FHOD3Q2V2M9 1422 aa14.38□□□□□ -0.11
CHEK1-213ENST00000532449 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
CHEK1-213ENST00000532449 PHLDB1Q86UU1 1377 aa14.36□□□□□ -0.11
CHEK1-213ENST00000532449 KIF21BO75037 1637 aa14.35□□□□□ -0.11
CHEK1-213ENST00000532449 EXOC6Q8TAG9 804 aa14.35□□□□□ -0.11
CHEK1-213ENST00000532449 PRKRIP1Q9H875 184 aaPredicted RBP14.34□□□□□ -0.11
CHEK1-213ENST00000532449 TNNT2P45379 298 aaPredicted RBP14.34□□□□□ -0.11
CHEK1-213ENST00000532449 WASHC2AQ641Q2 1341 aa14.33□□□□□ -0.11
CHEK1-213ENST00000532449 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
CHEK1-213ENST00000532449 WDR97A6NE52 1622 aa14.32□□□□□ -0.12
CHEK1-213ENST00000532449 IPO9Q96P70 1041 aaKnown RBP14.32□□□□□ -0.12
CHEK1-213ENST00000532449 MPHOSPH9Q99550 1183 aa14.32□□□□□ -0.12
CHEK1-213ENST00000532449 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
CHEK1-213ENST00000532449 DCAF11Q8TEB1 546 aa14.31□□□□□ -0.12
CHEK1-213ENST00000532449 CHGAP10645 457 aaKnown RBP14.3□□□□□ -0.12
CHEK1-213ENST00000532449 SLKQ9H2G2 1235 aaPredicted RBP14.29□□□□□ -0.12
CHEK1-213ENST00000532449 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
CHEK1-213ENST00000532449 NESP48681 1621 aa14.29□□□□□ -0.12
CHEK1-213ENST00000532449 AKNAQ7Z591 1439 aa14.28□□□□□ -0.12
CHEK1-213ENST00000532449 WDR43Q15061 677 aaKnown RBP eCLIP14.27□□□□□ -0.12
CHEK1-213ENST00000532449 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.12
CHEK1-213ENST00000532449 C11orf95C9JLR9 678 aaPredicted RBP14.27□□□□□ -0.12
CHEK1-213ENST00000532449 FRAT1Q92837 279 aaPredicted RBP14.27□□□□□ -0.13
CHEK1-213ENST00000532449 GZF1Q9H116 711 aaPredicted RBP14.26□□□□□ -0.13
CHEK1-213ENST00000532449 RCAN3Q9UKA8 241 aa14.25□□□□□ -0.13
CHEK1-213ENST00000532449 TIMELESSQ9UNS1 1208 aa14.25□□□□□ -0.13
CHEK1-213ENST00000532449 NUDCQ9Y266 331 aa14.25□□□□□ -0.13
CHEK1-213ENST00000532449 SYNJ1O43426 1573 aa14.24□□□□□ -0.13
CHEK1-213ENST00000532449 BRPF3Q9ULD4 1205 aa14.24□□□□□ -0.13
CHEK1-213ENST00000532449 ARHGAP35Q9NRY4 1499 aa14.24□□□□□ -0.13
CHEK1-213ENST00000532449 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
CHEK1-213ENST00000532449 PKD2Q13563 968 aa14.24□□□□□ -0.13
CHEK1-213ENST00000532449 TDRD9Q8NDG6 1382 aaKnown RBP14.23□□□□□ -0.13
CHEK1-213ENST00000532449 CFDP1Q9UEE9 299 aaPredicted RBP14.23□□□□□ -0.13
CHEK1-213ENST00000532449 PDE4AP27815 886 aa14.21□□□□□ -0.13
CHEK1-213ENST00000532449 CDCA7LQ96GN5 454 aa14.21□□□□□ -0.13
CHEK1-213ENST00000532449 ZNF644Q9H582 1327 aaPredicted RBP14.21□□□□□ -0.14
CHEK1-213ENST00000532449 HSP90AA1P07900 732 aaKnown RBP14.2□□□□□ -0.14
CHEK1-213ENST00000532449 ZBTB7CA1YPR0 619 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms