RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 KIAA0586Q9BVV6 1533 aa24.45■■□□□ 1.51
CTSB-224ENST00000532392 RAPGEF2Q9Y4G8 1499 aa24.43■■□□□ 1.5
CTSB-224ENST00000532392 ERCC6L2Q5T890 1561 aa24.42■■□□□ 1.5
CTSB-224ENST00000532392 PRG4Q92954 1404 aaPredicted RBP24.42■■□□□ 1.5
CTSB-224ENST00000532392 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
CTSB-224ENST00000532392 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
CTSB-224ENST00000532392 PRXQ9BXM0 1461 aa24.33■■□□□ 1.49
CTSB-224ENST00000532392 EEA1Q15075 1411 aa24.31■■□□□ 1.48
CTSB-224ENST00000532392 IQGAP2Q13576 1575 aa24.26■■□□□ 1.47
CTSB-224ENST00000532392 FAM9AQ8IZU1 332 aaPredicted RBP24.23■■□□□ 1.47
CTSB-224ENST00000532392 CARMIL2Q6F5E8 1435 aa24.2■■□□□ 1.46
CTSB-224ENST00000532392 UGGT2Q9NYU1 1516 aa24.15■■□□□ 1.46
CTSB-224ENST00000532392 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.45
CTSB-224ENST00000532392 CTTNBP2Q8WZ74 1663 aa24.12■■□□□ 1.45
CTSB-224ENST00000532392 PTPRGP23470 1445 aa24.12■■□□□ 1.45
CTSB-224ENST00000532392 DISP1Q96F81 1524 aa24.12■■□□□ 1.45
CTSB-224ENST00000532392 TRHP20396 242 aaPredicted RBP24.11■■□□□ 1.45
CTSB-224ENST00000532392 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
CTSB-224ENST00000532392 GOLGA3Q08378 1498 aa24.03■■□□□ 1.44
CTSB-224ENST00000532392 NPM1P06748 294 aaKnown RBP eCLIP24.03■■□□□ 1.44
CTSB-224ENST00000532392 KIAA0556O60303 1618 aa24.02■■□□□ 1.44
CTSB-224ENST00000532392 KIF21BO75037 1637 aa24.02■■□□□ 1.44
CTSB-224ENST00000532392 ADCY10Q96PN6 1610 aa24■■□□□ 1.43
CTSB-224ENST00000532392 UACAQ9BZF9 1416 aa23.95■■□□□ 1.42
CTSB-224ENST00000532392 UHRF1BP1LA0JNW5 1464 aa23.93■■□□□ 1.42
CTSB-224ENST00000532392 EHMT2Q96KQ7 1210 aa23.91■■□□□ 1.42
CTSB-224ENST00000532392 P3H3Q8IVL6 736 aa23.9■■□□□ 1.42
CTSB-224ENST00000532392 ABCC2Q92887 1545 aa23.89■■□□□ 1.42
CTSB-224ENST00000532392 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.41
CTSB-224ENST00000532392 MAPKBP1O60336 1514 aa23.88■■□□□ 1.41
CTSB-224ENST00000532392 RANGAP1P46060 587 aaPredicted RBP23.87■■□□□ 1.41
CTSB-224ENST00000532392 SAMD9Q5K651 1589 aa23.84■■□□□ 1.41
CTSB-224ENST00000532392 PLB1Q6P1J6 1458 aa23.83■■□□□ 1.41
CTSB-224ENST00000532392 ABCC10Q5T3U5 1492 aa23.81■■□□□ 1.4
CTSB-224ENST00000532392 KDM5BQ9UGL1 1544 aa23.8■■□□□ 1.4
CTSB-224ENST00000532392 ABCA8O94911 1581 aa23.79■■□□□ 1.4
CTSB-224ENST00000532392 FAM69CQ0P6D2 419 aa23.79■■□□□ 1.4
CTSB-224ENST00000532392 ASXL2Q76L83 1435 aa23.76■■□□□ 1.39
CTSB-224ENST00000532392 KIF13AQ9H1H9 1805 aa23.74■■□□□ 1.39
CTSB-224ENST00000532392 FHOD3Q2V2M9 1422 aa23.74■■□□□ 1.39
CTSB-224ENST00000532392 EFCAB5A4FU69 1503 aa23.74■■□□□ 1.39
CTSB-224ENST00000532392 DIP2BQ9P265 1576 aa23.72■■□□□ 1.39
CTSB-224ENST00000532392 ZCCHC11Q5TAX3 1644 aaKnown RBP23.72■■□□□ 1.39
CTSB-224ENST00000532392 ARHGAP35Q9NRY4 1499 aa23.63■■□□□ 1.37
CTSB-224ENST00000532392 RAPGEF6Q8TEU7 1601 aa23.63■■□□□ 1.37
CTSB-224ENST00000532392 ARID3CA6NKF2 412 aa23.63■■□□□ 1.37
CTSB-224ENST00000532392 ATP10BO94823 1461 aa23.62■■□□□ 1.37
CTSB-224ENST00000532392 WDR7Q9Y4E6 1490 aa23.62■■□□□ 1.37
CTSB-224ENST00000532392 EPRSP07814 1512 aaKnown RBP23.61■■□□□ 1.37
CTSB-224ENST00000532392 GLI2P10070 1586 aa23.61■■□□□ 1.37
CTSB-224ENST00000532392 NUP153P49790 1475 aaKnown RBP23.57■■□□□ 1.36
CTSB-224ENST00000532392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.55■■□□□ 1.36
CTSB-224ENST00000532392 HNRNPUL2Q1KMD3 747 aaKnown RBP23.55■■□□□ 1.36
CTSB-224ENST00000532392 KCNH8Q96L42 1107 aa23.55■■□□□ 1.36
CTSB-224ENST00000532392 FMN1Q68DA7 1419 aa23.55■■□□□ 1.36
CTSB-224ENST00000532392 TSPOAP1O95153 1857 aa23.51■■□□□ 1.35
CTSB-224ENST00000532392 CLIP1P30622 1438 aa23.48■■□□□ 1.35
CTSB-224ENST00000532392 ATP1B4Q9UN42 357 aaPredicted RBP23.47■■□□□ 1.35
CTSB-224ENST00000532392 MAP3K4Q9Y6R4 1608 aa23.46■■□□□ 1.35
CTSB-224ENST00000532392 PLEKHD1A6NEE1 506 aa23.45■■□□□ 1.34
CTSB-224ENST00000532392 CD109Q6YHK3 1445 aa23.43■■□□□ 1.34
CTSB-224ENST00000532392 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
CTSB-224ENST00000532392 PPRC1Q5VV67 1664 aaKnown RBP23.42■■□□□ 1.34
CTSB-224ENST00000532392 HECW1Q76N89 1606 aa23.41■■□□□ 1.34
CTSB-224ENST00000532392 TEX14Q8IWB6 1497 aa23.4■■□□□ 1.34
CTSB-224ENST00000532392 CDK13Q14004 1512 aaKnown RBP23.39■■□□□ 1.34
CTSB-224ENST00000532392 CFAP43Q8NDM7 1665 aa23.38■■□□□ 1.33
CTSB-224ENST00000532392 MAGI3Q5TCQ9 1506 aa23.37■■□□□ 1.33
CTSB-224ENST00000532392 KDM6BO15054 1643 aa23.37■■□□□ 1.33
CTSB-224ENST00000532392 CASKIN1Q8WXD9 1431 aa23.36■■□□□ 1.33
CTSB-224ENST00000532392 CEP162Q5TB80 1403 aa23.35■■□□□ 1.33
CTSB-224ENST00000532392 CDK11AQ9UQ88 783 aaPredicted RBP23.34■■□□□ 1.33
CTSB-224ENST00000532392 ABCA9Q8IUA7 1624 aa23.33■■□□□ 1.33
CTSB-224ENST00000532392 PCF11O94913 1555 aaKnown RBP23.31■■□□□ 1.32
CTSB-224ENST00000532392 FYCO1Q9BQS8 1478 aa23.28■■□□□ 1.32
CTSB-224ENST00000532392 COL17A1Q9UMD9 1497 aaPredicted RBP23.28■■□□□ 1.32
CTSB-224ENST00000532392 CCDC18Q5T9S5 1454 aa23.26■■□□□ 1.31
CTSB-224ENST00000532392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.24■■□□□ 1.315e-6■□□□□ 9.5
CTSB-224ENST00000532392 LRRIQ1Q96JM4 1722 aa23.24■■□□□ 1.31
CTSB-224ENST00000532392 PHLDB1Q86UU1 1377 aa23.23■■□□□ 1.31
CTSB-224ENST00000532392 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
CTSB-224ENST00000532392 NEO1Q92859 1461 aa23.18■■□□□ 1.3
CTSB-224ENST00000532392 TTC37Q6PGP7 1564 aa23.18■■□□□ 1.3
CTSB-224ENST00000532392 ARAP3Q8WWN8 1544 aa23.18■■□□□ 1.3
CTSB-224ENST00000532392 KIF14Q15058 1648 aa23.14■■□□□ 1.29
CTSB-224ENST00000532392 PLCH2O75038 1416 aa23.14■■□□□ 1.29
CTSB-224ENST00000532392 FANCAO15360 1455 aa23.13■■□□□ 1.29
CTSB-224ENST00000532392 AKNAQ7Z591 1439 aa23.1■■□□□ 1.29
CTSB-224ENST00000532392 RAPGEF3O95398 923 aa23.08■■□□□ 1.29
CTSB-224ENST00000532392 VPS8Q8N3P4 1428 aa23.08■■□□□ 1.28
CTSB-224ENST00000532392 CFAP74Q9C0B2 1584 aa23.07■■□□□ 1.28
CTSB-224ENST00000532392 EFCAB2Q5VUJ9 269 aa23.07■■□□□ 1.28
CTSB-224ENST00000532392 MTUS2Q5JR59 1369 aa23.04■■□□□ 1.28
CTSB-224ENST00000532392 MYO5CQ9NQX4 1742 aa23.04■■□□□ 1.28
CTSB-224ENST00000532392 DENND4BO75064 1496 aaPredicted RBP23.04■■□□□ 1.28
CTSB-224ENST00000532392 ARHGAP5Q13017 1502 aa23■■□□□ 1.27
CTSB-224ENST00000532392 ADGRL1O94910 1474 aa22.99■■□□□ 1.27
CTSB-224ENST00000532392 SCAPERQ9BY12 1400 aa22.99■■□□□ 1.27
CTSB-224ENST00000532392 FRMPD1Q5SYB0 1578 aa22.97■■□□□ 1.27
CTSB-224ENST00000532392 AEBP2Q6ZN18 517 aaPredicted RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms