RNA–Protein interactions for RNA: ENST00000531593.1

GPAA1-216, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-216ENST00000531593 RUSC2Q8N2Y8 1516 aa28.37■■■□□ 2.13
GPAA1-216ENST00000531593 CUL7Q14999 1698 aa28.3■■■□□ 2.12
GPAA1-216ENST00000531593 CARMIL1Q5VZK9 1371 aa28.3■■■□□ 2.12
GPAA1-216ENST00000531593 KIAA0586Q9BVV6 1533 aa28.27■■■□□ 2.12
GPAA1-216ENST00000531593 TTBK1Q5TCY1 1321 aaPredicted RBP28.18■■■□□ 2.1
GPAA1-216ENST00000531593 NPM1P06748 294 aaKnown RBP eCLIP28.11■■■□□ 2.09
GPAA1-216ENST00000531593 ADCY10Q96PN6 1610 aa28.04■■■□□ 2.08
GPAA1-216ENST00000531593 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
GPAA1-216ENST00000531593 PTPRGP23470 1445 aa28.03■■■□□ 2.08
GPAA1-216ENST00000531593 IQGAP2Q13576 1575 aa28.01■■■□□ 2.07
GPAA1-216ENST00000531593 CARMIL2Q6F5E8 1435 aa28.01■■■□□ 2.07
GPAA1-216ENST00000531593 FAM69CQ0P6D2 419 aa28■■■□□ 2.07
GPAA1-216ENST00000531593 TNIKQ9UKE5 1360 aa27.98■■■□□ 2.07
GPAA1-216ENST00000531593 KIF13AQ9H1H9 1805 aa27.95■■■□□ 2.06
GPAA1-216ENST00000531593 ABCC10Q5T3U5 1492 aa27.93■■■□□ 2.06
GPAA1-216ENST00000531593 MAPKBP1O60336 1514 aa27.92■■■□□ 2.06
GPAA1-216ENST00000531593 DISP1Q96F81 1524 aa27.89■■■□□ 2.06
GPAA1-216ENST00000531593 DIP2BQ9P265 1576 aa27.85■■■□□ 2.05
GPAA1-216ENST00000531593 UGGT2Q9NYU1 1516 aa27.82■■■□□ 2.04
GPAA1-216ENST00000531593 ABCC2Q92887 1545 aa27.81■■■□□ 2.04
GPAA1-216ENST00000531593 UACAQ9BZF9 1416 aa27.8■■■□□ 2.04
GPAA1-216ENST00000531593 KIAA0556O60303 1618 aa27.77■■■□□ 2.04
GPAA1-216ENST00000531593 PRXQ9BXM0 1461 aa27.76■■■□□ 2.04
GPAA1-216ENST00000531593 AEBP2Q6ZN18 517 aaPredicted RBP27.76■■■□□ 2.03
GPAA1-216ENST00000531593 UHRF1BP1LA0JNW5 1464 aa27.74■■■□□ 2.03
GPAA1-216ENST00000531593 ASXL2Q76L83 1435 aa27.74■■■□□ 2.03
GPAA1-216ENST00000531593 CTTNBP2Q8WZ74 1663 aa27.7■■■□□ 2.02
GPAA1-216ENST00000531593 TSPOAP1O95153 1857 aa27.68■■■□□ 2.02
GPAA1-216ENST00000531593 CSRNP3Q8WYN3 585 aa27.67■■■□□ 2.02
GPAA1-216ENST00000531593 PLB1Q6P1J6 1458 aa27.67■■■□□ 2.02
GPAA1-216ENST00000531593 GOLGA3Q08378 1498 aa27.63■■■□□ 2.01
GPAA1-216ENST00000531593 KDM5BQ9UGL1 1544 aa27.62■■■□□ 2.01
GPAA1-216ENST00000531593 P3H3Q8IVL6 736 aa27.62■■■□□ 2.01
GPAA1-216ENST00000531593 FAM9AQ8IZU1 332 aaPredicted RBP27.62■■■□□ 2.01
GPAA1-216ENST00000531593 KDM6BO15054 1643 aa27.58■■■□□ 2.01
GPAA1-216ENST00000531593 ZCCHC11Q5TAX3 1644 aaKnown RBP27.58■■■□□ 2.01
GPAA1-216ENST00000531593 EPRSP07814 1512 aaKnown RBP27.55■■■□□ 2
GPAA1-216ENST00000531593 GLI2P10070 1586 aa27.53■■■□□ 2
GPAA1-216ENST00000531593 RANGAP1P46060 587 aaPredicted RBP27.53■■■□□ 2
GPAA1-216ENST00000531593 ARID3CA6NKF2 412 aa27.52■■■□□ 2
GPAA1-216ENST00000531593 ABCA8O94911 1581 aa27.5■■□□□ 1.99
GPAA1-216ENST00000531593 EEA1Q15075 1411 aa27.48■■□□□ 1.99
GPAA1-216ENST00000531593 PPRC1Q5VV67 1664 aaKnown RBP27.46■■□□□ 1.99
GPAA1-216ENST00000531593 WDR7Q9Y4E6 1490 aa27.46■■□□□ 1.99
GPAA1-216ENST00000531593 KCNH8Q96L42 1107 aa27.46■■□□□ 1.99
GPAA1-216ENST00000531593 EHMT2Q96KQ7 1210 aa27.41■■□□□ 1.98
GPAA1-216ENST00000531593 MAP3K4Q9Y6R4 1608 aa27.4■■□□□ 1.98
GPAA1-216ENST00000531593 COL17A1Q9UMD9 1497 aaPredicted RBP27.36■■□□□ 1.97
GPAA1-216ENST00000531593 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
GPAA1-216ENST00000531593 TEX14Q8IWB6 1497 aa27.35■■□□□ 1.97
GPAA1-216ENST00000531593 SAMD9Q5K651 1589 aa27.35■■□□□ 1.97
GPAA1-216ENST00000531593 CD109Q6YHK3 1445 aa27.32■■□□□ 1.96
GPAA1-216ENST00000531593 ATP10BO94823 1461 aa27.32■■□□□ 1.96
GPAA1-216ENST00000531593 KDM4FA0A1W2PPD8 638 aa27.31■■□□□ 1.96
GPAA1-216ENST00000531593 FHOD3Q2V2M9 1422 aa27.31■■□□□ 1.96
GPAA1-216ENST00000531593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.29■■□□□ 1.96
GPAA1-216ENST00000531593 HNRNPUL2Q1KMD3 747 aaKnown RBP27.29■■□□□ 1.96
GPAA1-216ENST00000531593 KIF21BO75037 1637 aa27.24■■□□□ 1.95
GPAA1-216ENST00000531593 RAPGEF6Q8TEU7 1601 aa27.24■■□□□ 1.95
GPAA1-216ENST00000531593 MAGI3Q5TCQ9 1506 aa27.21■■□□□ 1.95
GPAA1-216ENST00000531593 UBTFP17480 764 aaKnown RBP27.21■■□□□ 1.95
GPAA1-216ENST00000531593 CFAP43Q8NDM7 1665 aa27.2■■□□□ 1.94
GPAA1-216ENST00000531593 NUP153P49790 1475 aaKnown RBP27.18■■□□□ 1.94
GPAA1-216ENST00000531593 EFCAB5A4FU69 1503 aa27.11■■□□□ 1.93
GPAA1-216ENST00000531593 ADGRL1O94910 1474 aa27.1■■□□□ 1.93
GPAA1-216ENST00000531593 ABCA9Q8IUA7 1624 aa27.05■■□□□ 1.92
GPAA1-216ENST00000531593 PLEKHD1A6NEE1 506 aa27.05■■□□□ 1.92
GPAA1-216ENST00000531593 ATP1B4Q9UN42 357 aaPredicted RBP27.05■■□□□ 1.92
GPAA1-216ENST00000531593 RAPGEF3O95398 923 aa26.98■■□□□ 1.91
GPAA1-216ENST00000531593 CDK13Q14004 1512 aaKnown RBP26.98■■□□□ 1.91
GPAA1-216ENST00000531593 ARAP3Q8WWN8 1544 aa26.98■■□□□ 1.91
GPAA1-216ENST00000531593 ARHGAP35Q9NRY4 1499 aa26.97■■□□□ 1.91
GPAA1-216ENST00000531593 PHLDB1Q86UU1 1377 aa26.92■■□□□ 1.9
GPAA1-216ENST00000531593 NEO1Q92859 1461 aa26.92■■□□□ 1.9
GPAA1-216ENST00000531593 FMN1Q68DA7 1419 aa26.9■■□□□ 1.9
GPAA1-216ENST00000531593 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.88■■□□□ 1.89
GPAA1-216ENST00000531593 TTC37Q6PGP7 1564 aa26.84■■□□□ 1.89
GPAA1-216ENST00000531593 HECW1Q76N89 1606 aa26.83■■□□□ 1.89
GPAA1-216ENST00000531593 AKNAQ7Z591 1439 aa26.82■■□□□ 1.88
GPAA1-216ENST00000531593 FANCAO15360 1455 aa26.82■■□□□ 1.88
GPAA1-216ENST00000531593 FRMPD1Q5SYB0 1578 aa26.8■■□□□ 1.88
GPAA1-216ENST00000531593 DENND4BO75064 1496 aaPredicted RBP26.79■■□□□ 1.88
GPAA1-216ENST00000531593 ARID4BQ4LE39 1312 aaPredicted RBP26.76■■□□□ 1.87
GPAA1-216ENST00000531593 CDK11AQ9UQ88 783 aaPredicted RBP26.76■■□□□ 1.87
GPAA1-216ENST00000531593 PLCH2O75038 1416 aa26.72■■□□□ 1.87
GPAA1-216ENST00000531593 CFAP74Q9C0B2 1584 aa26.71■■□□□ 1.87
GPAA1-216ENST00000531593 TROQ12816 1431 aaPredicted RBP26.69■■□□□ 1.86
GPAA1-216ENST00000531593 KIF14Q15058 1648 aa26.68■■□□□ 1.86
GPAA1-216ENST00000531593 SCAPERQ9BY12 1400 aa26.67■■□□□ 1.86
GPAA1-216ENST00000531593 RICTORQ6R327 1708 aa26.67■■□□□ 1.86
GPAA1-216ENST00000531593 PCF11O94913 1555 aaKnown RBP26.67■■□□□ 1.86
GPAA1-216ENST00000531593 CLIP1P30622 1438 aa26.65■■□□□ 1.86
GPAA1-216ENST00000531593 EFCAB2Q5VUJ9 269 aa26.65■■□□□ 1.86
GPAA1-216ENST00000531593 HECW2Q9P2P5 1572 aa26.65■■□□□ 1.86
GPAA1-216ENST00000531593 LRRIQ1Q96JM4 1722 aa26.65■■□□□ 1.86
GPAA1-216ENST00000531593 CASKIN1Q8WXD9 1431 aa26.65■■□□□ 1.86
GPAA1-216ENST00000531593 ARHGEF40Q8TER5 1519 aa26.64■■□□□ 1.85
GPAA1-216ENST00000531593 YEATS2Q9ULM3 1422 aa26.64■■□□□ 1.85
GPAA1-216ENST00000531593 ADAMTSL3P82987 1691 aa26.6■■□□□ 1.85
GPAA1-216ENST00000531593 POGZQ7Z3K3 1410 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms