RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 CUL7Q14999 1698 aa18.57■□□□□ 0.56
CAPN1-221ENST00000531068 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
CAPN1-221ENST00000531068 SHROOM2Q13796 1616 aa18.55■□□□□ 0.56
CAPN1-221ENST00000531068 NPM1P06748 294 aaKnown RBP eCLIP18.51■□□□□ 0.55
CAPN1-221ENST00000531068 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
CAPN1-221ENST00000531068 RUSC2Q8N2Y8 1516 aa18.49■□□□□ 0.55
CAPN1-221ENST00000531068 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
CAPN1-221ENST00000531068 PTPRGP23470 1445 aa18.44■□□□□ 0.54
CAPN1-221ENST00000531068 CSRNP3Q8WYN3 585 aa18.42■□□□□ 0.54
CAPN1-221ENST00000531068 TNIKQ9UKE5 1360 aa18.41■□□□□ 0.54
CAPN1-221ENST00000531068 TTBK1Q5TCY1 1321 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-221ENST00000531068 PRXQ9BXM0 1461 aa18.36■□□□□ 0.53
CAPN1-221ENST00000531068 IQGAP2Q13576 1575 aa18.35■□□□□ 0.53
CAPN1-221ENST00000531068 EEA1Q15075 1411 aa18.32■□□□□ 0.52
CAPN1-221ENST00000531068 FAM69CQ0P6D2 419 aa18.31■□□□□ 0.52
CAPN1-221ENST00000531068 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
CAPN1-221ENST00000531068 UGGT2Q9NYU1 1516 aa18.29■□□□□ 0.52
CAPN1-221ENST00000531068 DISP1Q96F81 1524 aa18.28■□□□□ 0.52
CAPN1-221ENST00000531068 CHIC1Q5VXU3 224 aa18.28■□□□□ 0.52
CAPN1-221ENST00000531068 UACAQ9BZF9 1416 aa18.27■□□□□ 0.52
CAPN1-221ENST00000531068 GOLGA3Q08378 1498 aa18.25■□□□□ 0.51
CAPN1-221ENST00000531068 ABCC10Q5T3U5 1492 aa18.23■□□□□ 0.51
CAPN1-221ENST00000531068 ADCY10Q96PN6 1610 aa18.23■□□□□ 0.51
CAPN1-221ENST00000531068 MAPKBP1O60336 1514 aa18.23■□□□□ 0.51
CAPN1-221ENST00000531068 UHRF1BP1LA0JNW5 1464 aa18.22■□□□□ 0.51
CAPN1-221ENST00000531068 ABCC2Q92887 1545 aa18.21■□□□□ 0.51
CAPN1-221ENST00000531068 PLB1Q6P1J6 1458 aa18.16■□□□□ 0.5
CAPN1-221ENST00000531068 KIAA0556O60303 1618 aa18.16■□□□□ 0.5
CAPN1-221ENST00000531068 P3H3Q8IVL6 736 aa18.15■□□□□ 0.5
CAPN1-221ENST00000531068 ASXL2Q76L83 1435 aa18.15■□□□□ 0.5
CAPN1-221ENST00000531068 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
CAPN1-221ENST00000531068 RANGAP1P46060 587 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-221ENST00000531068 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
CAPN1-221ENST00000531068 CTTNBP2Q8WZ74 1663 aa18.07■□□□□ 0.48
CAPN1-221ENST00000531068 DIP2BQ9P265 1576 aa18.07■□□□□ 0.48
CAPN1-221ENST00000531068 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.48
CAPN1-221ENST00000531068 KCNH8Q96L42 1107 aa18.02■□□□□ 0.48
CAPN1-221ENST00000531068 EPRSP07814 1512 aaKnown RBP18.01■□□□□ 0.47
CAPN1-221ENST00000531068 ABCA8O94911 1581 aa18■□□□□ 0.47
CAPN1-221ENST00000531068 KIF13AQ9H1H9 1805 aa18■□□□□ 0.47
CAPN1-221ENST00000531068 ARID3CA6NKF2 412 aa17.99■□□□□ 0.47
CAPN1-221ENST00000531068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
CAPN1-221ENST00000531068 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
CAPN1-221ENST00000531068 WDR7Q9Y4E6 1490 aa17.99■□□□□ 0.47
CAPN1-221ENST00000531068 GLI2P10070 1586 aa17.99■□□□□ 0.47
CAPN1-221ENST00000531068 KIF21BO75037 1637 aa17.98■□□□□ 0.47
CAPN1-221ENST00000531068 AEBP2Q6ZN18 517 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-221ENST00000531068 ATP10BO94823 1461 aa17.95■□□□□ 0.46
CAPN1-221ENST00000531068 ZCCHC11Q5TAX3 1644 aaKnown RBP17.94■□□□□ 0.46
CAPN1-221ENST00000531068 FHOD3Q2V2M9 1422 aa17.94■□□□□ 0.46
CAPN1-221ENST00000531068 SAMD9Q5K651 1589 aa17.94■□□□□ 0.46
CAPN1-221ENST00000531068 PLEKHD1A6NEE1 506 aa17.92■□□□□ 0.46
CAPN1-221ENST00000531068 CD109Q6YHK3 1445 aa17.91■□□□□ 0.46
CAPN1-221ENST00000531068 TEX14Q8IWB6 1497 aa17.91■□□□□ 0.46
CAPN1-221ENST00000531068 EFCAB5A4FU69 1503 aa17.89■□□□□ 0.45
CAPN1-221ENST00000531068 KDM6BO15054 1643 aa17.86■□□□□ 0.45
CAPN1-221ENST00000531068 ATP1B4Q9UN42 357 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-221ENST00000531068 MAGI3Q5TCQ9 1506 aa17.84■□□□□ 0.45
CAPN1-221ENST00000531068 NUP153P49790 1475 aaKnown RBP17.84■□□□□ 0.45
CAPN1-221ENST00000531068 FMN1Q68DA7 1419 aa17.83■□□□□ 0.45
CAPN1-221ENST00000531068 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.44
CAPN1-221ENST00000531068 MAP3K4Q9Y6R4 1608 aa17.81■□□□□ 0.44
CAPN1-221ENST00000531068 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
CAPN1-221ENST00000531068 TSPOAP1O95153 1857 aa17.81■□□□□ 0.44
CAPN1-221ENST00000531068 PHLDB1Q86UU1 1377 aa17.8■□□□□ 0.44
CAPN1-221ENST00000531068 COL17A1Q9UMD9 1497 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-221ENST00000531068 ARHGAP35Q9NRY4 1499 aa17.79■□□□□ 0.44
CAPN1-221ENST00000531068 PPRC1Q5VV67 1664 aaKnown RBP17.75■□□□□ 0.43
CAPN1-221ENST00000531068 CFAP43Q8NDM7 1665 aa17.73■□□□□ 0.43
CAPN1-221ENST00000531068 KDM4FA0A1W2PPD8 638 aa17.71■□□□□ 0.43
CAPN1-221ENST00000531068 NEO1Q92859 1461 aa17.69■□□□□ 0.42
CAPN1-221ENST00000531068 ARAP3Q8WWN8 1544 aa17.68■□□□□ 0.42
CAPN1-221ENST00000531068 CLIP1P30622 1438 aa17.68■□□□□ 0.42
CAPN1-221ENST00000531068 ABCA9Q8IUA7 1624 aa17.68■□□□□ 0.42
CAPN1-221ENST00000531068 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
CAPN1-221ENST00000531068 CDK13Q14004 1512 aaKnown RBP17.65■□□□□ 0.42
CAPN1-221ENST00000531068 HECW1Q76N89 1606 aa17.64■□□□□ 0.41
CAPN1-221ENST00000531068 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
CAPN1-221ENST00000531068 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
CAPN1-221ENST00000531068 PLCH2O75038 1416 aa17.61■□□□□ 0.41
CAPN1-221ENST00000531068 AKNAQ7Z591 1439 aa17.61■□□□□ 0.41
CAPN1-221ENST00000531068 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
CAPN1-221ENST00000531068 FANCAO15360 1455 aa17.6■□□□□ 0.41
CAPN1-221ENST00000531068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.6■□□□□ 0.41
CAPN1-221ENST00000531068 DENND4BO75064 1496 aaPredicted RBP17.58■□□□□ 0.41
CAPN1-221ENST00000531068 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
CAPN1-221ENST00000531068 ADGRL1O94910 1474 aa17.55■□□□□ 0.4
CAPN1-221ENST00000531068 LOC105371045A0A1W2PR82 267 aa17.54■□□□□ 0.4
CAPN1-221ENST00000531068 FYCO1Q9BQS8 1478 aa17.54■□□□□ 0.4
CAPN1-221ENST00000531068 SCAPERQ9BY12 1400 aa17.53■□□□□ 0.4
CAPN1-221ENST00000531068 ARID4BQ4LE39 1312 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-221ENST00000531068 CEP162Q5TB80 1403 aa17.51■□□□□ 0.39
CAPN1-221ENST00000531068 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
CAPN1-221ENST00000531068 PCF11O94913 1555 aaKnown RBP17.47■□□□□ 0.39
CAPN1-221ENST00000531068 CFAP74Q9C0B2 1584 aa17.47■□□□□ 0.39
CAPN1-221ENST00000531068 MAGI2Q86UL8 1455 aa17.46■□□□□ 0.39
CAPN1-221ENST00000531068 KIF14Q15058 1648 aa17.46■□□□□ 0.39
CAPN1-221ENST00000531068 MTUS2Q5JR59 1369 aa17.45■□□□□ 0.38
CAPN1-221ENST00000531068 AFAP1Q8N556 730 aa17.44■□□□□ 0.38
CAPN1-221ENST00000531068 MYT1LQ9UL68 1186 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms