RNA–Protein interactions for RNA: ENST00000530923.5

SDHD-207, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-207ENST00000530923 SYNJ1O43426 1573 aa13.53□□□□□ -0.24
SDHD-207ENST00000530923 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
SDHD-207ENST00000530923 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
SDHD-207ENST00000530923 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
SDHD-207ENST00000530923 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
SDHD-207ENST00000530923 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
SDHD-207ENST00000530923 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
SDHD-207ENST00000530923 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
SDHD-207ENST00000530923 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
SDHD-207ENST00000530923 TOP2BQ02880 1626 aa13.4□□□□□ -0.26
SDHD-207ENST00000530923 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
SDHD-207ENST00000530923 ADAMTS12P58397 1594 aa13.4□□□□□ -0.26
SDHD-207ENST00000530923 NUP160Q12769 1436 aa13.39□□□□□ -0.27
SDHD-207ENST00000530923 FHAD1B1AJZ9 1412 aa13.35□□□□□ -0.27
SDHD-207ENST00000530923 SHROOM2Q13796 1616 aa13.33□□□□□ -0.28
SDHD-207ENST00000530923 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
SDHD-207ENST00000530923 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
SDHD-207ENST00000530923 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.29
SDHD-207ENST00000530923 KIF13AQ9H1H9 1805 aa13.23□□□□□ -0.29
SDHD-207ENST00000530923 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
SDHD-207ENST00000530923 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
SDHD-207ENST00000530923 IGF1RP08069 1367 aa13.2□□□□□ -0.3
SDHD-207ENST00000530923 KCNA4P22459 653 aa13.17□□□□□ -0.3
SDHD-207ENST00000530923 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
SDHD-207ENST00000530923 FAM69CQ0P6D2 419 aa13.14□□□□□ -0.31
SDHD-207ENST00000530923 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
SDHD-207ENST00000530923 DCAF8L1A6NGE4 600 aa13.12□□□□□ -0.31
SDHD-207ENST00000530923 KIF27Q86VH2 1401 aa13.12□□□□□ -0.31
SDHD-207ENST00000530923 ABCC10Q5T3U5 1492 aa13.11□□□□□ -0.31
SDHD-207ENST00000530923 CUL7Q14999 1698 aa13.08□□□□□ -0.31
SDHD-207ENST00000530923 MAPKBP1O60336 1514 aa13.08□□□□□ -0.31
SDHD-207ENST00000530923 DIP2BQ9P265 1576 aa13.08□□□□□ -0.32
SDHD-207ENST00000530923 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
SDHD-207ENST00000530923 TTBK1Q5TCY1 1321 aaPredicted RBP13.08□□□□□ -0.32
SDHD-207ENST00000530923 CARMIL1Q5VZK9 1371 aa13.07□□□□□ -0.32
SDHD-207ENST00000530923 RNF39Q9H2S5 420 aa13.06□□□□□ -0.32
SDHD-207ENST00000530923 TSPOAP1O95153 1857 aa13.05□□□□□ -0.32
SDHD-207ENST00000530923 PTPRGP23470 1445 aa13.04□□□□□ -0.32
SDHD-207ENST00000530923 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
SDHD-207ENST00000530923 DISP1Q96F81 1524 aa12.98□□□□□ -0.33
SDHD-207ENST00000530923 KDM4FA0A1W2PPD8 638 aa12.98□□□□□ -0.33
SDHD-207ENST00000530923 IQGAP2Q13576 1575 aa12.98□□□□□ -0.33
SDHD-207ENST00000530923 ABCC2Q92887 1545 aa12.97□□□□□ -0.33
SDHD-207ENST00000530923 KDM6BO15054 1643 aa12.96□□□□□ -0.33
SDHD-207ENST00000530923 CARMIL2Q6F5E8 1435 aa12.96□□□□□ -0.34
SDHD-207ENST00000530923 ASXL2Q76L83 1435 aa12.96□□□□□ -0.34
SDHD-207ENST00000530923 PPRC1Q5VV67 1664 aaKnown RBP12.94□□□□□ -0.34
SDHD-207ENST00000530923 UACAQ9BZF9 1416 aa12.93□□□□□ -0.34
SDHD-207ENST00000530923 UHRF1BP1LA0JNW5 1464 aa12.92□□□□□ -0.34
SDHD-207ENST00000530923 RAPGEF2Q9Y4G8 1499 aa12.92□□□□□ -0.34
SDHD-207ENST00000530923 UGGT2Q9NYU1 1516 aa12.91□□□□□ -0.34
SDHD-207ENST00000530923 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
SDHD-207ENST00000530923 COL17A1Q9UMD9 1497 aaPredicted RBP12.91□□□□□ -0.34
SDHD-207ENST00000530923 GLI2P10070 1586 aa12.9□□□□□ -0.34
SDHD-207ENST00000530923 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
SDHD-207ENST00000530923 KIAA0556O60303 1618 aa12.88□□□□□ -0.35
SDHD-207ENST00000530923 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
SDHD-207ENST00000530923 ZCCHC11Q5TAX3 1644 aaKnown RBP12.87□□□□□ -0.35
SDHD-207ENST00000530923 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
SDHD-207ENST00000530923 CTTNBP2Q8WZ74 1663 aa12.81□□□□□ -0.36
SDHD-207ENST00000530923 PRXQ9BXM0 1461 aa12.8□□□□□ -0.36
SDHD-207ENST00000530923 ABCA8O94911 1581 aa12.79□□□□□ -0.36
SDHD-207ENST00000530923 C1QBPQ07021 282 aaKnown RBP12.79□□□□□ -0.36
SDHD-207ENST00000530923 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
SDHD-207ENST00000530923 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
SDHD-207ENST00000530923 KCNH8Q96L42 1107 aa12.78□□□□□ -0.36
SDHD-207ENST00000530923 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
SDHD-207ENST00000530923 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
SDHD-207ENST00000530923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
SDHD-207ENST00000530923 GOLGA3Q08378 1498 aa12.74□□□□□ -0.37
SDHD-207ENST00000530923 TEX14Q8IWB6 1497 aa12.74□□□□□ -0.37
SDHD-207ENST00000530923 CD109Q6YHK3 1445 aa12.73□□□□□ -0.37
SDHD-207ENST00000530923 POTEHQ6S545 545 aa12.71□□□□□ -0.37
SDHD-207ENST00000530923 MAGI3Q5TCQ9 1506 aa12.71□□□□□ -0.38
SDHD-207ENST00000530923 ATP10BO94823 1461 aa12.71□□□□□ -0.38
SDHD-207ENST00000530923 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
SDHD-207ENST00000530923 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
SDHD-207ENST00000530923 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
SDHD-207ENST00000530923 SAMD9Q5K651 1589 aa12.64□□□□□ -0.39
SDHD-207ENST00000530923 RANGAP1P46060 587 aaPredicted RBP12.64□□□□□ -0.39
SDHD-207ENST00000530923 HECW2Q9P2P5 1572 aa12.64□□□□□ -0.39
SDHD-207ENST00000530923 KIF21BO75037 1637 aa12.63□□□□□ -0.39
SDHD-207ENST00000530923 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
SDHD-207ENST00000530923 RAPGEF3O95398 923 aa12.62□□□□□ -0.39
SDHD-207ENST00000530923 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
SDHD-207ENST00000530923 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
SDHD-207ENST00000530923 RAPGEF6Q8TEU7 1601 aa12.61□□□□□ -0.39
SDHD-207ENST00000530923 FHOD3Q2V2M9 1422 aa12.6□□□□□ -0.39
SDHD-207ENST00000530923 NUP153P49790 1475 aaKnown RBP12.59□□□□□ -0.39
SDHD-207ENST00000530923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
SDHD-207ENST00000530923 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
SDHD-207ENST00000530923 SLC4A1APQ9BWU0 796 aaKnown RBP12.58□□□□□ -0.4
SDHD-207ENST00000530923 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
SDHD-207ENST00000530923 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
SDHD-207ENST00000530923 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
SDHD-207ENST00000530923 NEO1Q92859 1461 aa12.53□□□□□ -0.4
SDHD-207ENST00000530923 PHLDB1Q86UU1 1377 aa12.52□□□□□ -0.41
SDHD-207ENST00000530923 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
SDHD-207ENST00000530923 EEA1Q15075 1411 aa12.51□□□□□ -0.41
SDHD-207ENST00000530923 PTPRMP28827 1452 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms