RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 CUL7Q14999 1698 aa31.86■■■□□ 2.69
PSMC3-208ENST00000530887 KIAA0586Q9BVV6 1533 aa31.82■■■□□ 2.68
PSMC3-208ENST00000530887 IGF1RP08069 1367 aa31.81■■■□□ 2.68
PSMC3-208ENST00000530887 NPM1P06748 294 aaKnown RBP eCLIP31.81■■■□□ 2.68
PSMC3-208ENST00000530887 AEBP2Q6ZN18 517 aaPredicted RBP31.75■■■□□ 2.67
PSMC3-208ENST00000530887 MAPKBP1O60336 1514 aa31.69■■■□□ 2.66
PSMC3-208ENST00000530887 KIF13AQ9H1H9 1805 aa31.67■■■□□ 2.66
PSMC3-208ENST00000530887 ABCC10Q5T3U5 1492 aa31.65■■■□□ 2.66
PSMC3-208ENST00000530887 CARMIL1Q5VZK9 1371 aa31.64■■■□□ 2.66
PSMC3-208ENST00000530887 CARMIL2Q6F5E8 1435 aa31.58■■■□□ 2.65
PSMC3-208ENST00000530887 FAM69CQ0P6D2 419 aa31.58■■■□□ 2.65
PSMC3-208ENST00000530887 ADCY10Q96PN6 1610 aa31.57■■■□□ 2.64
PSMC3-208ENST00000530887 PTPRGP23470 1445 aa31.52■■■□□ 2.64
PSMC3-208ENST00000530887 DIP2BQ9P265 1576 aa31.5■■■□□ 2.63
PSMC3-208ENST00000530887 TNIKQ9UKE5 1360 aa31.49■■■□□ 2.63
PSMC3-208ENST00000530887 IQGAP2Q13576 1575 aa31.46■■■□□ 2.63
PSMC3-208ENST00000530887 ABCC2Q92887 1545 aa31.38■■■□□ 2.61
PSMC3-208ENST00000530887 RAPGEF2Q9Y4G8 1499 aa31.37■■■□□ 2.61
PSMC3-208ENST00000530887 UHRF1BP1LA0JNW5 1464 aa31.35■■■□□ 2.61
PSMC3-208ENST00000530887 PLB1Q6P1J6 1458 aa31.33■■■□□ 2.61
PSMC3-208ENST00000530887 UACAQ9BZF9 1416 aa31.29■■■□□ 2.6
PSMC3-208ENST00000530887 KDM6BO15054 1643 aa31.28■■■□□ 2.6
PSMC3-208ENST00000530887 UGGT2Q9NYU1 1516 aa31.28■■■□□ 2.6
PSMC3-208ENST00000530887 DISP1Q96F81 1524 aa31.25■■■□□ 2.59
PSMC3-208ENST00000530887 GLI2P10070 1586 aa31.23■■■□□ 2.59
PSMC3-208ENST00000530887 TTBK1Q5TCY1 1321 aaPredicted RBP31.23■■■□□ 2.59
PSMC3-208ENST00000530887 ASXL2Q76L83 1435 aa31.22■■■□□ 2.59
PSMC3-208ENST00000530887 TSPOAP1O95153 1857 aa31.19■■■□□ 2.58
PSMC3-208ENST00000530887 KDM5BQ9UGL1 1544 aa31.16■■■□□ 2.58
PSMC3-208ENST00000530887 KIAA0556O60303 1618 aa31.14■■■□□ 2.58
PSMC3-208ENST00000530887 GOLGA3Q08378 1498 aa31.12■■■□□ 2.57
PSMC3-208ENST00000530887 CTTNBP2Q8WZ74 1663 aa31.06■■■□□ 2.56
PSMC3-208ENST00000530887 TEX14Q8IWB6 1497 aa31.05■■■□□ 2.56
PSMC3-208ENST00000530887 EPRSP07814 1512 aaKnown RBP31.04■■■□□ 2.56
PSMC3-208ENST00000530887 FAM9AQ8IZU1 332 aaPredicted RBP31.04■■■□□ 2.56
PSMC3-208ENST00000530887 ZCCHC11Q5TAX3 1644 aaKnown RBP31.01■■■□□ 2.55
PSMC3-208ENST00000530887 PRXQ9BXM0 1461 aa30.99■■■□□ 2.55
PSMC3-208ENST00000530887 PPRC1Q5VV67 1664 aaKnown RBP30.98■■■□□ 2.55
PSMC3-208ENST00000530887 MAP3K4Q9Y6R4 1608 aa30.97■■■□□ 2.55
PSMC3-208ENST00000530887 WDR7Q9Y4E6 1490 aa30.95■■■□□ 2.55
PSMC3-208ENST00000530887 KDM4FA0A1W2PPD8 638 aa30.9■■■□□ 2.54
PSMC3-208ENST00000530887 ABCA8O94911 1581 aa30.87■■■□□ 2.53
PSMC3-208ENST00000530887 CFAP43Q8NDM7 1665 aa30.8■■■□□ 2.52
PSMC3-208ENST00000530887 MAGI3Q5TCQ9 1506 aa30.79■■■□□ 2.52
PSMC3-208ENST00000530887 CD109Q6YHK3 1445 aa30.77■■■□□ 2.52
PSMC3-208ENST00000530887 COL17A1Q9UMD9 1497 aaPredicted RBP30.76■■■□□ 2.51
PSMC3-208ENST00000530887 EEA1Q15075 1411 aa30.75■■■□□ 2.51
PSMC3-208ENST00000530887 CSRNP3Q8WYN3 585 aa30.74■■■□□ 2.51
PSMC3-208ENST00000530887 ADGRL1O94910 1474 aa30.7■■■□□ 2.51
PSMC3-208ENST00000530887 KCNH8Q96L42 1107 aa30.68■■■□□ 2.5
PSMC3-208ENST00000530887 PHLDB1Q86UU1 1377 aa30.65■■■□□ 2.5
PSMC3-208ENST00000530887 SAMD9Q5K651 1589 aa30.62■■■□□ 2.49
PSMC3-208ENST00000530887 ATP10BO94823 1461 aa30.59■■■□□ 2.49
PSMC3-208ENST00000530887 ARAP3Q8WWN8 1544 aa30.55■■■□□ 2.48
PSMC3-208ENST00000530887 P3H3Q8IVL6 736 aa30.54■■■□□ 2.48
PSMC3-208ENST00000530887 RAPGEF6Q8TEU7 1601 aa30.53■■■□□ 2.48
PSMC3-208ENST00000530887 ABCA9Q8IUA7 1624 aa30.51■■■□□ 2.48
PSMC3-208ENST00000530887 NEO1Q92859 1461 aa30.44■■■□□ 2.46
PSMC3-208ENST00000530887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.43■■■□□ 2.46
PSMC3-208ENST00000530887 HNRNPUL2Q1KMD3 747 aaKnown RBP30.43■■■□□ 2.46
PSMC3-208ENST00000530887 ARID3CA6NKF2 412 aa30.42■■■□□ 2.46
PSMC3-208ENST00000530887 EFCAB5A4FU69 1503 aa30.41■■■□□ 2.46
PSMC3-208ENST00000530887 NUP153P49790 1475 aaKnown RBP30.38■■■□□ 2.45
PSMC3-208ENST00000530887 KIF21BO75037 1637 aa30.36■■■□□ 2.45
PSMC3-208ENST00000530887 PLEKHD1A6NEE1 506 aa30.36■■■□□ 2.45
PSMC3-208ENST00000530887 FHOD3Q2V2M9 1422 aa30.33■■■□□ 2.45
PSMC3-208ENST00000530887 HECW2Q9P2P5 1572 aa30.28■■■□□ 2.44
PSMC3-208ENST00000530887 CFAP74Q9C0B2 1584 aa30.25■■■□□ 2.43
PSMC3-208ENST00000530887 RANGAP1P46060 587 aaPredicted RBP30.24■■■□□ 2.43
PSMC3-208ENST00000530887 RAPGEF3O95398 923 aa30.21■■■□□ 2.43
PSMC3-208ENST00000530887 DENND4BO75064 1496 aaPredicted RBP30.19■■■□□ 2.42
PSMC3-208ENST00000530887 FMN1Q68DA7 1419 aa30.16■■■□□ 2.42
PSMC3-208ENST00000530887 AKNAQ7Z591 1439 aa30.15■■■□□ 2.42
PSMC3-208ENST00000530887 FANCAO15360 1455 aa30.15■■■□□ 2.42
PSMC3-208ENST00000530887 ADAMTSL3P82987 1691 aa30.14■■■□□ 2.41
PSMC3-208ENST00000530887 FRMPD1Q5SYB0 1578 aa30.13■■■□□ 2.41
PSMC3-208ENST00000530887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.12■■■□□ 2.413e-6■■□□□ 14
PSMC3-208ENST00000530887 UBTFP17480 764 aaKnown RBP30.11■■■□□ 2.41
PSMC3-208ENST00000530887 CDK11AQ9UQ88 783 aaPredicted RBP30.11■■■□□ 2.41
PSMC3-208ENST00000530887 PTPRMP28827 1452 aa30.1■■■□□ 2.41
PSMC3-208ENST00000530887 ARID4BQ4LE39 1312 aaPredicted RBP30.09■■■□□ 2.41
PSMC3-208ENST00000530887 ARHGEF40Q8TER5 1519 aa30.09■■■□□ 2.41
PSMC3-208ENST00000530887 BCORL1Q5H9F3 1711 aa30.08■■■□□ 2.41
PSMC3-208ENST00000530887 MAGI2Q86UL8 1455 aa30.07■■■□□ 2.4
PSMC3-208ENST00000530887 RICTORQ6R327 1708 aa30.07■■■□□ 2.4
PSMC3-208ENST00000530887 POGZQ7Z3K3 1410 aa30.06■■■□□ 2.4
PSMC3-208ENST00000530887 HECW1Q76N89 1606 aa30.06■■■□□ 2.4
PSMC3-208ENST00000530887 ILDR1Q86SU0 546 aaPredicted RBP30.05■■■□□ 2.4
PSMC3-208ENST00000530887 ZMYM4Q5VZL5 1548 aa30.05■■■□□ 2.4
PSMC3-208ENST00000530887 TTC37Q6PGP7 1564 aa30.03■■■□□ 2.4
PSMC3-208ENST00000530887 PLCH2O75038 1416 aa30.02■■■□□ 2.4
PSMC3-208ENST00000530887 CDK13Q14004 1512 aaKnown RBP30■■■□□ 2.39
PSMC3-208ENST00000530887 ARHGAP35Q9NRY4 1499 aa29.97■■■□□ 2.39
PSMC3-208ENST00000530887 ZFYVE16Q7Z3T8 1539 aa29.96■■■□□ 2.39
PSMC3-208ENST00000530887 CHIC1Q5VXU3 224 aa29.96■■■□□ 2.39
PSMC3-208ENST00000530887 EFCAB2Q5VUJ9 269 aa29.95■■■□□ 2.39
PSMC3-208ENST00000530887 MADDQ8WXG6 1647 aa29.95■■■□□ 2.38
PSMC3-208ENST00000530887 ATP1B4Q9UN42 357 aaPredicted RBP29.93■■■□□ 2.38
PSMC3-208ENST00000530887 CLIP1P30622 1438 aa29.93■■■□□ 2.38
PSMC3-208ENST00000530887 SCAPERQ9BY12 1400 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms