RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 YTHDC1Q96MU7 727 aaKnown RBP28.35■■■□□ 2.13
LTBP3-217ENST00000530785 KANK4Q5T7N3 995 aaPredicted RBP28.3■■■□□ 2.12
LTBP3-217ENST00000530785 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.12
LTBP3-217ENST00000530785 MIER1Q8N108 512 aa28.24■■■□□ 2.11
LTBP3-217ENST00000530785 WDR97A6NE52 1622 aa28.2■■■□□ 2.11
LTBP3-217ENST00000530785 CUL7Q14999 1698 aa28.18■■■□□ 2.1
LTBP3-217ENST00000530785 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
LTBP3-217ENST00000530785 RRBP1Q9P2E9 1410 aaKnown RBP28.13■■■□□ 2.09
LTBP3-217ENST00000530785 WDR62O43379 1518 aa28.12■■■□□ 2.09
LTBP3-217ENST00000530785 TIAM1Q13009 1591 aa28.1■■■□□ 2.09
LTBP3-217ENST00000530785 CLSPNQ9HAW4 1339 aa28.09■■■□□ 2.09
LTBP3-217ENST00000530785 ABCA5Q8WWZ7 1642 aa28.08■■■□□ 2.08
LTBP3-217ENST00000530785 MAP3K1Q13233 1512 aa28.07■■■□□ 2.08
LTBP3-217ENST00000530785 CTTNBP2Q8WZ74 1663 aa28.06■■■□□ 2.08
LTBP3-217ENST00000530785 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
LTBP3-217ENST00000530785 PCF11O94913 1555 aaKnown RBP28.02■■■□□ 2.08
LTBP3-217ENST00000530785 TDRD9Q8NDG6 1382 aaKnown RBP28.01■■■□□ 2.07
LTBP3-217ENST00000530785 EFCAB5A4FU69 1503 aa28■■■□□ 2.07
LTBP3-217ENST00000530785 CCNB3Q8WWL7 1395 aa28■■■□□ 2.07
LTBP3-217ENST00000530785 ANP32EQ9BTT0 268 aa27.98■■■□□ 2.07
LTBP3-217ENST00000530785 P3H3Q8IVL6 736 aa27.98■■■□□ 2.07
LTBP3-217ENST00000530785 TARBP1Q13395 1621 aaKnown RBP27.97■■■□□ 2.07
LTBP3-217ENST00000530785 GAPVD1Q14C86 1478 aa27.97■■■□□ 2.07
LTBP3-217ENST00000530785 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
LTBP3-217ENST00000530785 CFAP43Q8NDM7 1665 aa27.97■■■□□ 2.07
LTBP3-217ENST00000530785 LRRC9Q6ZRR7 1453 aa27.96■■■□□ 2.07
LTBP3-217ENST00000530785 BCL11AQ9H165 835 aa27.94■■■□□ 2.06
LTBP3-217ENST00000530785 SUPT16HQ9Y5B9 1047 aaKnown RBP27.93■■■□□ 2.06
LTBP3-217ENST00000530785 DHX57Q6P158 1386 aaKnown RBP27.89■■■□□ 2.06
LTBP3-217ENST00000530785 FYCO1Q9BQS8 1478 aa27.88■■■□□ 2.05
LTBP3-217ENST00000530785 IFT140Q96RY7 1462 aa27.86■■■□□ 2.05
LTBP3-217ENST00000530785 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
LTBP3-217ENST00000530785 AQRO60306 1485 aaKnown RBP eCLIP27.85■■■□□ 2.056e-7■■■■□ 25.1
LTBP3-217ENST00000530785 TSHZ2Q9NRE2 1034 aa27.85■■■□□ 2.05
LTBP3-217ENST00000530785 CASKIN1Q8WXD9 1431 aa27.84■■■□□ 2.05
LTBP3-217ENST00000530785 PHLDB1Q86UU1 1377 aa27.82■■■□□ 2.04
LTBP3-217ENST00000530785 SAMD9Q5K651 1589 aa27.8■■■□□ 2.04
LTBP3-217ENST00000530785 ATP1B4Q9UN42 357 aaPredicted RBP27.8■■■□□ 2.04
LTBP3-217ENST00000530785 ITGAEP38570 1179 aa27.78■■■□□ 2.04
LTBP3-217ENST00000530785 FMN1Q68DA7 1419 aa27.78■■■□□ 2.04
LTBP3-217ENST00000530785 PBRM1Q86U86 1689 aa27.77■■■□□ 2.04
LTBP3-217ENST00000530785 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.03
LTBP3-217ENST00000530785 EIF4G3O43432 1585 aaKnown RBP27.67■■■□□ 2.02
LTBP3-217ENST00000530785 RAB3GAP2Q9H2M9 1393 aa27.65■■■□□ 2.02
LTBP3-217ENST00000530785 ADAMTS12P58397 1594 aa27.65■■■□□ 2.02
LTBP3-217ENST00000530785 LRRIQ1Q96JM4 1722 aa27.65■■■□□ 2.02
LTBP3-217ENST00000530785 FAM50AQ14320 339 aaKnown RBP27.62■■■□□ 2.01
LTBP3-217ENST00000530785 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
LTBP3-217ENST00000530785 SETD5Q9C0A6 1442 aa27.58■■■□□ 2.01
LTBP3-217ENST00000530785 PRKCSHP14314 528 aaPredicted RBP27.57■■■□□ 2
LTBP3-217ENST00000530785 IQGAP2Q13576 1575 aa27.55■■■□□ 2
LTBP3-217ENST00000530785 MTUS2Q5JR59 1369 aa27.54■■■□□ 2
LTBP3-217ENST00000530785 MAPKBP1O60336 1514 aa27.52■■■□□ 2
LTBP3-217ENST00000530785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.51■■■□□ 2
LTBP3-217ENST00000530785 FGD6Q6ZV73 1430 aa27.51■■□□□ 1.99
LTBP3-217ENST00000530785 EHBP1L1Q8N3D4 1523 aa27.45■■□□□ 1.98
LTBP3-217ENST00000530785 NCOA2Q15596 1464 aa27.44■■□□□ 1.98
LTBP3-217ENST00000530785 SUPT6HQ7KZ85 1726 aaKnown RBP27.43■■□□□ 1.98
LTBP3-217ENST00000530785 HECW1Q76N89 1606 aa27.41■■□□□ 1.98
LTBP3-217ENST00000530785 CCDC18Q5T9S5 1454 aa27.41■■□□□ 1.98
LTBP3-217ENST00000530785 FBLN2P98095 1184 aa27.41■■□□□ 1.98
LTBP3-217ENST00000530785 MAGI3Q5TCQ9 1506 aa27.4■■□□□ 1.98
LTBP3-217ENST00000530785 UGGT2Q9NYU1 1516 aa27.38■■□□□ 1.97
LTBP3-217ENST00000530785 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
LTBP3-217ENST00000530785 MYOM3Q5VTT5 1437 aa27.38■■□□□ 1.97
LTBP3-217ENST00000530785 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
LTBP3-217ENST00000530785 ARHGEF11O15085 1522 aa27.34■■□□□ 1.97
LTBP3-217ENST00000530785 EPRSP07814 1512 aaKnown RBP27.32■■□□□ 1.96
LTBP3-217ENST00000530785 SYNJ2O15056 1496 aa27.31■■□□□ 1.96
LTBP3-217ENST00000530785 KIAA0586Q9BVV6 1533 aa27.31■■□□□ 1.96
LTBP3-217ENST00000530785 PTPRKQ15262 1439 aa27.31■■□□□ 1.96
LTBP3-217ENST00000530785 GRIN2AQ12879 1464 aa27.3■■□□□ 1.96
LTBP3-217ENST00000530785 CDK13Q14004 1512 aaKnown RBP27.28■■□□□ 1.96
LTBP3-217ENST00000530785 PTPN23Q9H3S7 1636 aa27.28■■□□□ 1.96
LTBP3-217ENST00000530785 KIAA0556O60303 1618 aa27.27■■□□□ 1.96
LTBP3-217ENST00000530785 DISP1Q96F81 1524 aa27.25■■□□□ 1.95
LTBP3-217ENST00000530785 HFM1A2PYH4 1435 aa27.25■■□□□ 1.95
LTBP3-217ENST00000530785 SIN3AQ96ST3 1273 aa27.21■■□□□ 1.95
LTBP3-217ENST00000530785 TCOF1Q13428 1488 aaKnown RBP27.18■■□□□ 1.94
LTBP3-217ENST00000530785 NAIPQ13075 1403 aa27.17■■□□□ 1.94
LTBP3-217ENST00000530785 ARID3CA6NKF2 412 aa27.16■■□□□ 1.94
LTBP3-217ENST00000530785 CEP170Q5SW79 1584 aa27.16■■□□□ 1.94
LTBP3-217ENST00000530785 RBM19Q9Y4C8 960 aaKnown RBP27.15■■□□□ 1.94
LTBP3-217ENST00000530785 CHD1O14646 1710 aa27.15■■□□□ 1.94
LTBP3-217ENST00000530785 UACAQ9BZF9 1416 aa27.13■■□□□ 1.93
LTBP3-217ENST00000530785 RAPGEF6Q8TEU7 1601 aa27.12■■□□□ 1.93
LTBP3-217ENST00000530785 ERICH6Q7L0X2 663 aa27.11■■□□□ 1.93
LTBP3-217ENST00000530785 NUP153P49790 1475 aaKnown RBP27.11■■□□□ 1.93
LTBP3-217ENST00000530785 BCANQ96GW7 911 aa27.11■■□□□ 1.93
LTBP3-217ENST00000530785 NUP160Q12769 1436 aa27.09■■□□□ 1.93
LTBP3-217ENST00000530785 MIA2Q96PC5 1412 aa27.08■■□□□ 1.93
LTBP3-217ENST00000530785 FKBP8Q14318 412 aa27.08■■□□□ 1.93
LTBP3-217ENST00000530785 TIMELESSQ9UNS1 1208 aa27.07■■□□□ 1.92
LTBP3-217ENST00000530785 GCC2Q8IWJ2 1684 aa27.06■■□□□ 1.92
LTBP3-217ENST00000530785 KCNH8Q96L42 1107 aa27.04■■□□□ 1.92
LTBP3-217ENST00000530785 AKNAQ7Z591 1439 aa27■■□□□ 1.91
LTBP3-217ENST00000530785 RRP7BPQ9NSQ0 103 aa26.99■■□□□ 1.91
LTBP3-217ENST00000530785 CHIC2Q9UKJ5 165 aa26.99■■□□□ 1.91
LTBP3-217ENST00000530785 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
LTBP3-217ENST00000530785 PLB1Q6P1J6 1458 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms