RNA–Protein interactions for RNA: ENST00000530742.5

CLINT1-210, Transcript of clathrin interactor 1, humanhuman

TSL 5 BASIC

Gene CLINT1, Length 3,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-210ENST00000530742 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
CLINT1-210ENST00000530742 LRRC9Q6ZRR7 1453 aa18.85■□□□□ 0.61
CLINT1-210ENST00000530742 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
CLINT1-210ENST00000530742 KANK4Q5T7N3 995 aaPredicted RBP18.84■□□□□ 0.61
CLINT1-210ENST00000530742 THOC2Q8NI27 1593 aaKnown RBP18.81■□□□□ 0.6
CLINT1-210ENST00000530742 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
CLINT1-210ENST00000530742 TTBK1Q5TCY1 1321 aaPredicted RBP18.8■□□□□ 0.6
CLINT1-210ENST00000530742 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
CLINT1-210ENST00000530742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.79■□□□□ 0.6
CLINT1-210ENST00000530742 DHX57Q6P158 1386 aaKnown RBP18.79■□□□□ 0.6
CLINT1-210ENST00000530742 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
CLINT1-210ENST00000530742 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
CLINT1-210ENST00000530742 LRRIQ1Q96JM4 1722 aa18.74■□□□□ 0.59
CLINT1-210ENST00000530742 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
CLINT1-210ENST00000530742 ZNF316A6NFI3 1004 aaPredicted RBP18.72■□□□□ 0.59
CLINT1-210ENST00000530742 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
CLINT1-210ENST00000530742 FMN1Q68DA7 1419 aa18.7■□□□□ 0.58
CLINT1-210ENST00000530742 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
CLINT1-210ENST00000530742 ADAMTS12P58397 1594 aa18.66■□□□□ 0.58
CLINT1-210ENST00000530742 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
CLINT1-210ENST00000530742 MRC2Q9UBG0 1479 aa18.63■□□□□ 0.57
CLINT1-210ENST00000530742 PHLDB1Q86UU1 1377 aa18.63■□□□□ 0.57
CLINT1-210ENST00000530742 WDR62O43379 1518 aa18.63■□□□□ 0.57
CLINT1-210ENST00000530742 RANGAP1P46060 587 aaPredicted RBP18.63■□□□□ 0.57
CLINT1-210ENST00000530742 ARHGEF11O15085 1522 aa18.63■□□□□ 0.57
CLINT1-210ENST00000530742 FHOD3Q2V2M9 1422 aa18.63■□□□□ 0.57
CLINT1-210ENST00000530742 MAPKBP1O60336 1514 aa18.62■□□□□ 0.57
CLINT1-210ENST00000530742 EHBP1L1Q8N3D4 1523 aa18.56■□□□□ 0.56
CLINT1-210ENST00000530742 SETD5Q9C0A6 1442 aa18.56■□□□□ 0.56
CLINT1-210ENST00000530742 SUPT6HQ7KZ85 1726 aaKnown RBP18.56■□□□□ 0.56
CLINT1-210ENST00000530742 UGGT2Q9NYU1 1516 aa18.55■□□□□ 0.56
CLINT1-210ENST00000530742 IQGAP2Q13576 1575 aa18.54■□□□□ 0.56
CLINT1-210ENST00000530742 CCDC18Q5T9S5 1454 aa18.54■□□□□ 0.56
CLINT1-210ENST00000530742 TDRD9Q8NDG6 1382 aaKnown RBP18.53■□□□□ 0.56
CLINT1-210ENST00000530742 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
CLINT1-210ENST00000530742 RAB3GAP2Q9H2M9 1393 aa18.53■□□□□ 0.56
CLINT1-210ENST00000530742 HECW1Q76N89 1606 aa18.52■□□□□ 0.56
CLINT1-210ENST00000530742 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
CLINT1-210ENST00000530742 TCOF1Q13428 1488 aaKnown RBP18.48■□□□□ 0.55
CLINT1-210ENST00000530742 ACIN1Q9UKV3 1341 aaKnown RBP18.47■□□□□ 0.55
CLINT1-210ENST00000530742 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
CLINT1-210ENST00000530742 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
CLINT1-210ENST00000530742 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
CLINT1-210ENST00000530742 MAGI3Q5TCQ9 1506 aa18.43■□□□□ 0.54
CLINT1-210ENST00000530742 TIMELESSQ9UNS1 1208 aa18.43■□□□□ 0.54
CLINT1-210ENST00000530742 NCOA2Q15596 1464 aa18.43■□□□□ 0.54
CLINT1-210ENST00000530742 MYOM3Q5VTT5 1437 aa18.42■□□□□ 0.54
CLINT1-210ENST00000530742 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
CLINT1-210ENST00000530742 HFM1A2PYH4 1435 aa18.41■□□□□ 0.54
CLINT1-210ENST00000530742 AKNAQ7Z591 1439 aa18.41■□□□□ 0.54
CLINT1-210ENST00000530742 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
CLINT1-210ENST00000530742 KIAA0556O60303 1618 aa18.39■□□□□ 0.53
CLINT1-210ENST00000530742 KIAA0586Q9BVV6 1533 aa18.38■□□□□ 0.53
CLINT1-210ENST00000530742 EPRSP07814 1512 aaKnown RBP18.36■□□□□ 0.53
CLINT1-210ENST00000530742 CENPBP07199 599 aaPredicted RBP18.36■□□□□ 0.53
CLINT1-210ENST00000530742 MIA2Q96PC5 1412 aa18.34■□□□□ 0.53
CLINT1-210ENST00000530742 DISP1Q96F81 1524 aa18.34■□□□□ 0.53
CLINT1-210ENST00000530742 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
CLINT1-210ENST00000530742 NEUROD1Q13562 356 aa18.33■□□□□ 0.53
CLINT1-210ENST00000530742 P3H3Q8IVL6 736 aa18.33■□□□□ 0.52
CLINT1-210ENST00000530742 PTPRKQ15262 1439 aa18.33■□□□□ 0.52
CLINT1-210ENST00000530742 MTUS2Q5JR59 1369 aa18.33■□□□□ 0.52
CLINT1-210ENST00000530742 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
CLINT1-210ENST00000530742 UACAQ9BZF9 1416 aa18.31■□□□□ 0.52
CLINT1-210ENST00000530742 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
CLINT1-210ENST00000530742 ADCY10Q96PN6 1610 aa18.3■□□□□ 0.52
CLINT1-210ENST00000530742 NAIPQ13075 1403 aa18.29■□□□□ 0.52
CLINT1-210ENST00000530742 RAPGEF6Q8TEU7 1601 aa18.29■□□□□ 0.52
CLINT1-210ENST00000530742 MIER1Q8N108 512 aa18.28■□□□□ 0.52
CLINT1-210ENST00000530742 CEP170Q5SW79 1584 aa18.24■□□□□ 0.51
CLINT1-210ENST00000530742 DNMT1P26358 1616 aaKnown RBP18.23■□□□□ 0.51
CLINT1-210ENST00000530742 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
CLINT1-210ENST00000530742 SYNJ2O15056 1496 aa18.22■□□□□ 0.51
CLINT1-210ENST00000530742 FAM50AQ14320 339 aaKnown RBP18.22■□□□□ 0.51
CLINT1-210ENST00000530742 NUP160Q12769 1436 aa18.21■□□□□ 0.51
CLINT1-210ENST00000530742 NUP153P49790 1475 aaKnown RBP18.21■□□□□ 0.51
CLINT1-210ENST00000530742 CDK13Q14004 1512 aaKnown RBP18.2■□□□□ 0.5
CLINT1-210ENST00000530742 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
CLINT1-210ENST00000530742 ROCK1Q13464 1354 aa18.18■□□□□ 0.5
CLINT1-210ENST00000530742 ITGAEP38570 1179 aa18.16■□□□□ 0.5
CLINT1-210ENST00000530742 DENND4BO75064 1496 aaPredicted RBP18.16■□□□□ 0.5
CLINT1-210ENST00000530742 CROCC2H7BZ55 1655 aa18.16■□□□□ 0.5
CLINT1-210ENST00000530742 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
CLINT1-210ENST00000530742 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
CLINT1-210ENST00000530742 KDM6BO15054 1643 aa18.12■□□□□ 0.49
CLINT1-210ENST00000530742 ABCA8O94911 1581 aa18.11■□□□□ 0.49
CLINT1-210ENST00000530742 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
CLINT1-210ENST00000530742 PELP1Q8IZL8 1130 aaKnown RBP18.08■□□□□ 0.49
CLINT1-210ENST00000530742 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
CLINT1-210ENST00000530742 DAPK1P53355 1430 aa18.07■□□□□ 0.48
CLINT1-210ENST00000530742 ADGRL2O95490 1459 aa18.06■□□□□ 0.48
CLINT1-210ENST00000530742 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
CLINT1-210ENST00000530742 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
CLINT1-210ENST00000530742 SIN3AQ96ST3 1273 aa18.05■□□□□ 0.48
CLINT1-210ENST00000530742 ABCC5O15440 1437 aa18.03■□□□□ 0.48
CLINT1-210ENST00000530742 CDC42BPAQ5VT25 1732 aa18.02■□□□□ 0.47
CLINT1-210ENST00000530742 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
CLINT1-210ENST00000530742 POLR1AO95602 1720 aaPredicted RBP18.01■□□□□ 0.47
CLINT1-210ENST00000530742 CARMIL2Q6F5E8 1435 aa18■□□□□ 0.47
CLINT1-210ENST00000530742 KIF14Q15058 1648 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms