RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 NUP160Q12769 1436 aa40.29■■■■■ 4.04
ME3-209ENST00000530520 OSCARQ8IYS5 282 aa40.16■■■■■ 4.02
ME3-209ENST00000530520 KIAA0586Q9BVV6 1533 aa40.15■■■■■ 4.02
ME3-209ENST00000530520 IQGAP2Q13576 1575 aa40.12■■■■■ 4.01
ME3-209ENST00000530520 TNIKQ9UKE5 1360 aa40.11■■■■■ 4.01
ME3-209ENST00000530520 CLASP1Q7Z460 1538 aa40.09■■■■■ 4.01
ME3-209ENST00000530520 RANGAP1P46060 587 aaPredicted RBP39.95■■■■□ 3.99
ME3-209ENST00000530520 SHROOM2Q13796 1616 aa39.91■■■■□ 3.98
ME3-209ENST00000530520 JPH4Q96JJ6 628 aa39.89■■■■□ 3.98
ME3-209ENST00000530520 UGGT2Q9NYU1 1516 aa39.88■■■■□ 3.98
ME3-209ENST00000530520 CEP162Q5TB80 1403 aa39.84■■■■□ 3.97
ME3-209ENST00000530520 CLIP1P30622 1438 aa39.79■■■■□ 3.96
ME3-209ENST00000530520 PRG4Q92954 1404 aaPredicted RBP39.76■■■■□ 3.96
ME3-209ENST00000530520 SAMD9Q5K651 1589 aa39.76■■■■□ 3.96
ME3-209ENST00000530520 EFCAB5A4FU69 1503 aa39.76■■■■□ 3.95
ME3-209ENST00000530520 KIAA0556O60303 1618 aa39.72■■■■□ 3.95
ME3-209ENST00000530520 DISP1Q96F81 1524 aa39.72■■■■□ 3.95
ME3-209ENST00000530520 CARMIL2Q6F5E8 1435 aa39.71■■■■□ 3.95
ME3-209ENST00000530520 ARHGAP35Q9NRY4 1499 aa39.69■■■■□ 3.94
ME3-209ENST00000530520 ERCC6L2Q5T890 1561 aa39.66■■■■□ 3.94
ME3-209ENST00000530520 P3H3Q8IVL6 736 aa39.65■■■■□ 3.94
ME3-209ENST00000530520 FHOD3Q2V2M9 1422 aa39.58■■■■□ 3.93
ME3-209ENST00000530520 ARHGEF11O15085 1522 aa39.55■■■■□ 3.92
ME3-209ENST00000530520 ARAP1Q96P48 1450 aa39.52■■■■□ 3.92
ME3-209ENST00000530520 RIMBP3CA6NJZ7 1639 aa39.48■■■■□ 3.91
ME3-209ENST00000530520 RIMBP3BA6NNM3 1639 aa39.48■■■■□ 3.91
ME3-209ENST00000530520 RIMBP3Q9UFD9 1639 aa39.48■■■■□ 3.91
ME3-209ENST00000530520 TTBK1Q5TCY1 1321 aaPredicted RBP39.47■■■■□ 3.91
ME3-209ENST00000530520 PTPRGP23470 1445 aa39.4■■■■□ 3.9
ME3-209ENST00000530520 FMN1Q68DA7 1419 aa39.37■■■■□ 3.89
ME3-209ENST00000530520 VPS8Q8N3P4 1428 aa39.29■■■■□ 3.88
ME3-209ENST00000530520 DNAJC5Q9H3Z4 198 aa39.27■■■■□ 3.88
ME3-209ENST00000530520 PLB1Q6P1J6 1458 aa39.23■■■■□ 3.87
ME3-209ENST00000530520 PCF11O94913 1555 aaKnown RBP39.23■■■■□ 3.87
ME3-209ENST00000530520 RAPGEF6Q8TEU7 1601 aa39.22■■■■□ 3.87
ME3-209ENST00000530520 ABCA8O94911 1581 aa39.2■■■■□ 3.87
ME3-209ENST00000530520 UACAQ9BZF9 1416 aa39.17■■■■□ 3.86
ME3-209ENST00000530520 CASKIN1Q8WXD9 1431 aa39.15■■■■□ 3.86
ME3-209ENST00000530520 FYCO1Q9BQS8 1478 aa39.14■■■■□ 3.86
ME3-209ENST00000530520 HECW1Q76N89 1606 aa39.13■■■■□ 3.85
ME3-209ENST00000530520 CYB5RLQ6IPT4 315 aa39.12■■■■□ 3.85
ME3-209ENST00000530520 ATP1B4Q9UN42 357 aaPredicted RBP39.12■■■■□ 3.85
ME3-209ENST00000530520 ABCC2Q92887 1545 aa39.11■■■■□ 3.85
ME3-209ENST00000530520 ADCY10Q96PN6 1610 aa39.07■■■■□ 3.84
ME3-209ENST00000530520 UHRF1BP1LA0JNW5 1464 aa39.05■■■■□ 3.84
ME3-209ENST00000530520 NUP153P49790 1475 aaKnown RBP39.04■■■■□ 3.84
ME3-209ENST00000530520 LRRIQ1Q96JM4 1722 aa39.01■■■■□ 3.83
ME3-209ENST00000530520 ARID3CA6NKF2 412 aa38.97■■■■□ 3.83
ME3-209ENST00000530520 EPRSP07814 1512 aaKnown RBP38.94■■■■□ 3.82
ME3-209ENST00000530520 CCDC18Q5T9S5 1454 aa38.92■■■■□ 3.82
ME3-209ENST00000530520 CDK13Q14004 1512 aaKnown RBP38.9■■■■□ 3.82
ME3-209ENST00000530520 ZCCHC11Q5TAX3 1644 aaKnown RBP38.88■■■■□ 3.81
ME3-209ENST00000530520 KDM5BQ9UGL1 1544 aa38.88■■■■□ 3.81
ME3-209ENST00000530520 APLP2Q06481 763 aa38.87■■■■□ 3.81
ME3-209ENST00000530520 ATP10BO94823 1461 aa38.87■■■■□ 3.81
ME3-209ENST00000530520 CFAP43Q8NDM7 1665 aa38.86■■■■□ 3.81
ME3-209ENST00000530520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.86■■■■□ 3.81
ME3-209ENST00000530520 HNRNPUL2Q1KMD3 747 aaKnown RBP38.86■■■■□ 3.81
ME3-209ENST00000530520 TIAM1Q13009 1591 aa38.83■■■■□ 3.81
ME3-209ENST00000530520 NPM1P06748 294 aaKnown RBP eCLIP38.81■■■■□ 3.8
ME3-209ENST00000530520 MAP3K1Q13233 1512 aa38.78■■■■□ 3.8
ME3-209ENST00000530520 CDK11AQ9UQ88 783 aaPredicted RBP38.69■■■■□ 3.78
ME3-209ENST00000530520 MAGI3Q5TCQ9 1506 aa38.63■■■■□ 3.77
ME3-209ENST00000530520 MTUS2Q5JR59 1369 aa38.63■■■■□ 3.77
ME3-209ENST00000530520 PLEKHD1A6NEE1 506 aa38.62■■■■□ 3.77
ME3-209ENST00000530520 LRRC9Q6ZRR7 1453 aa38.62■■■■□ 3.77
ME3-209ENST00000530520 MAPKBP1O60336 1514 aa38.6■■■■□ 3.77
ME3-209ENST00000530520 EHBP1L1Q8N3D4 1523 aa38.6■■■■□ 3.77
ME3-209ENST00000530520 ASXL2Q76L83 1435 aa38.6■■■■□ 3.77
ME3-209ENST00000530520 KANK4Q5T7N3 995 aaPredicted RBP38.59■■■■□ 3.77
ME3-209ENST00000530520 TROQ12816 1431 aaPredicted RBP38.57■■■■□ 3.76
ME3-209ENST00000530520 WDR7Q9Y4E6 1490 aa38.56■■■■□ 3.76
ME3-209ENST00000530520 PPARGC1BQ86YN6 1023 aaKnown RBP38.53■■■■□ 3.76
ME3-209ENST00000530520 SUPT6HQ7KZ85 1726 aaKnown RBP38.47■■■■□ 3.75
ME3-209ENST00000530520 KIF14Q15058 1648 aa38.47■■■■□ 3.75
ME3-209ENST00000530520 KCNH8Q96L42 1107 aa38.44■■■■□ 3.74
ME3-209ENST00000530520 NCOA2Q15596 1464 aa38.35■■■■□ 3.73
ME3-209ENST00000530520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.31■■■■□ 3.72
ME3-209ENST00000530520 TTC37Q6PGP7 1564 aa38.3■■■■□ 3.72
ME3-209ENST00000530520 DIP2BQ9P265 1576 aa38.3■■■■□ 3.72
ME3-209ENST00000530520 ABCC10Q5T3U5 1492 aa38.28■■■■□ 3.72
ME3-209ENST00000530520 ABCA9Q8IUA7 1624 aa38.27■■■■□ 3.72
ME3-209ENST00000530520 GLI2P10070 1586 aa38.23■■■■□ 3.71
ME3-209ENST00000530520 CCNB3Q8WWL7 1395 aa38.22■■■■□ 3.71
ME3-209ENST00000530520 KIF13AQ9H1H9 1805 aa38.21■■■■□ 3.71
ME3-209ENST00000530520 MYO5CQ9NQX4 1742 aa38.21■■■■□ 3.71
ME3-209ENST00000530520 FAM69CQ0P6D2 419 aa38.19■■■■□ 3.7
ME3-209ENST00000530520 ITSN2Q9NZM3 1697 aa38.19■■■■□ 3.7
ME3-209ENST00000530520 CDC42BPAQ5VT25 1732 aa38.19■■■■□ 3.7
ME3-209ENST00000530520 PHLDB1Q86UU1 1377 aa38.19■■■■□ 3.7
ME3-209ENST00000530520 MAP3K4Q9Y6R4 1608 aa38.14■■■■□ 3.7
ME3-209ENST00000530520 PREX2Q70Z35 1606 aa38.14■■■■□ 3.7
ME3-209ENST00000530520 MYOM3Q5VTT5 1437 aa38.14■■■■□ 3.7
ME3-209ENST00000530520 GPATCH8Q9UKJ3 1502 aaKnown RBP38.13■■■■□ 3.69
ME3-209ENST00000530520 CD109Q6YHK3 1445 aa38.1■■■■□ 3.69
ME3-209ENST00000530520 CDC42BPBQ9Y5S2 1711 aa38.09■■■■□ 3.69
ME3-209ENST00000530520 PLCH2O75038 1416 aa38.06■■■■□ 3.68
ME3-209ENST00000530520 TRHP20396 242 aaPredicted RBP38.05■■■■□ 3.68
ME3-209ENST00000530520 ARHGAP5Q13017 1502 aa38.04■■■■□ 3.68
ME3-209ENST00000530520 TSPOAP1O95153 1857 aa38.03■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms