RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 JPH4Q96JJ6 628 aa28.89■■■□□ 2.22
CCS-205ENST00000530384 KIAA0586Q9BVV6 1533 aa28.89■■■□□ 2.21
CCS-205ENST00000530384 PRG4Q92954 1404 aaPredicted RBP28.86■■■□□ 2.21
CCS-205ENST00000530384 RAPGEF2Q9Y4G8 1499 aa28.83■■■□□ 2.21
CCS-205ENST00000530384 IQGAP2Q13576 1575 aa28.71■■■□□ 2.19
CCS-205ENST00000530384 PRXQ9BXM0 1461 aa28.68■■■□□ 2.18
CCS-205ENST00000530384 EEA1Q15075 1411 aa28.66■■■□□ 2.18
CCS-205ENST00000530384 CHIC1Q5VXU3 224 aa28.62■■■□□ 2.17
CCS-205ENST00000530384 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
CCS-205ENST00000530384 CARMIL2Q6F5E8 1435 aa28.6■■■□□ 2.17
CCS-205ENST00000530384 CTTNBP2Q8WZ74 1663 aa28.59■■■□□ 2.17
CCS-205ENST00000530384 TRHP20396 242 aaPredicted RBP28.55■■■□□ 2.16
CCS-205ENST00000530384 UGGT2Q9NYU1 1516 aa28.54■■■□□ 2.16
CCS-205ENST00000530384 TNIKQ9UKE5 1360 aa28.5■■■□□ 2.15
CCS-205ENST00000530384 DISP1Q96F81 1524 aa28.49■■■□□ 2.15
CCS-205ENST00000530384 PTPRGP23470 1445 aa28.49■■■□□ 2.15
CCS-205ENST00000530384 FAM9AQ8IZU1 332 aaPredicted RBP28.44■■■□□ 2.14
CCS-205ENST00000530384 KIAA0556O60303 1618 aa28.43■■■□□ 2.14
CCS-205ENST00000530384 ADCY10Q96PN6 1610 aa28.43■■■□□ 2.14
CCS-205ENST00000530384 GOLGA3Q08378 1498 aa28.4■■■□□ 2.14
CCS-205ENST00000530384 NPM1P06748 294 aaKnown RBP eCLIP28.4■■■□□ 2.14
CCS-205ENST00000530384 TTBK1Q5TCY1 1321 aaPredicted RBP28.39■■■□□ 2.13
CCS-205ENST00000530384 KIF21BO75037 1637 aa28.36■■■□□ 2.13
CCS-205ENST00000530384 MAPKBP1O60336 1514 aa28.31■■■□□ 2.12
CCS-205ENST00000530384 UACAQ9BZF9 1416 aa28.3■■■□□ 2.12
CCS-205ENST00000530384 UHRF1BP1LA0JNW5 1464 aa28.29■■■□□ 2.12
CCS-205ENST00000530384 ABCC2Q92887 1545 aa28.27■■■□□ 2.12
CCS-205ENST00000530384 KIF13AQ9H1H9 1805 aa28.21■■■□□ 2.11
CCS-205ENST00000530384 ABCC10Q5T3U5 1492 aa28.19■■■□□ 2.1
CCS-205ENST00000530384 SAMD9Q5K651 1589 aa28.19■■■□□ 2.1
CCS-205ENST00000530384 KDM5BQ9UGL1 1544 aa28.15■■■□□ 2.1
CCS-205ENST00000530384 PLB1Q6P1J6 1458 aa28.14■■■□□ 2.09
CCS-205ENST00000530384 DIP2BQ9P265 1576 aa28.13■■■□□ 2.09
CCS-205ENST00000530384 ABCA8O94911 1581 aa28.12■■■□□ 2.09
CCS-205ENST00000530384 FAM69CQ0P6D2 419 aa28.12■■■□□ 2.09
CCS-205ENST00000530384 P3H3Q8IVL6 736 aa28.12■■■□□ 2.09
CCS-205ENST00000530384 UBTFP17480 764 aaKnown RBP28.1■■■□□ 2.09
CCS-205ENST00000530384 ZCCHC11Q5TAX3 1644 aaKnown RBP28.09■■■□□ 2.09
CCS-205ENST00000530384 ASXL2Q76L83 1435 aa28.09■■■□□ 2.09
CCS-205ENST00000530384 RANGAP1P46060 587 aaPredicted RBP28.07■■■□□ 2.08
CCS-205ENST00000530384 EHMT2Q96KQ7 1210 aa28.06■■■□□ 2.08
CCS-205ENST00000530384 EFCAB5A4FU69 1503 aa28.06■■■□□ 2.08
CCS-205ENST00000530384 FHOD3Q2V2M9 1422 aa27.99■■■□□ 2.07
CCS-205ENST00000530384 GLI2P10070 1586 aa27.97■■■□□ 2.07
CCS-205ENST00000530384 RAPGEF6Q8TEU7 1601 aa27.96■■■□□ 2.07
CCS-205ENST00000530384 WDR7Q9Y4E6 1490 aa27.94■■■□□ 2.06
CCS-205ENST00000530384 EPRSP07814 1512 aaKnown RBP27.92■■■□□ 2.06
CCS-205ENST00000530384 TSPOAP1O95153 1857 aa27.91■■■□□ 2.06
CCS-205ENST00000530384 ATP10BO94823 1461 aa27.88■■■□□ 2.05
CCS-205ENST00000530384 ARHGAP35Q9NRY4 1499 aa27.85■■■□□ 2.05
CCS-205ENST00000530384 ARID3CA6NKF2 412 aa27.84■■■□□ 2.05
CCS-205ENST00000530384 NUP153P49790 1475 aaKnown RBP27.83■■■□□ 2.05
CCS-205ENST00000530384 MAP3K4Q9Y6R4 1608 aa27.82■■■□□ 2.04
CCS-205ENST00000530384 FMN1Q68DA7 1419 aa27.8■■■□□ 2.04
CCS-205ENST00000530384 PPRC1Q5VV67 1664 aaKnown RBP27.79■■■□□ 2.04
CCS-205ENST00000530384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.77■■■□□ 2.04
CCS-205ENST00000530384 HNRNPUL2Q1KMD3 747 aaKnown RBP27.77■■■□□ 2.04
CCS-205ENST00000530384 KCNH8Q96L42 1107 aa27.77■■■□□ 2.04
CCS-205ENST00000530384 CFAP43Q8NDM7 1665 aa27.75■■■□□ 2.03
CCS-205ENST00000530384 KDM6BO15054 1643 aa27.74■■■□□ 2.03
CCS-205ENST00000530384 TEX14Q8IWB6 1497 aa27.73■■■□□ 2.03
CCS-205ENST00000530384 CD109Q6YHK3 1445 aa27.69■■■□□ 2.02
CCS-205ENST00000530384 HECW1Q76N89 1606 aa27.69■■■□□ 2.02
CCS-205ENST00000530384 MAGI3Q5TCQ9 1506 aa27.66■■■□□ 2.02
CCS-205ENST00000530384 PLEKHD1A6NEE1 506 aa27.65■■■□□ 2.02
CCS-205ENST00000530384 CLIP1P30622 1438 aa27.65■■■□□ 2.02
CCS-205ENST00000530384 ABCA9Q8IUA7 1624 aa27.63■■■□□ 2.01
CCS-205ENST00000530384 ATP1B4Q9UN42 357 aaPredicted RBP27.62■■■□□ 2.01
CCS-205ENST00000530384 CDK13Q14004 1512 aaKnown RBP27.62■■■□□ 2.01
CCS-205ENST00000530384 CASKIN1Q8WXD9 1431 aa27.54■■■□□ 2
CCS-205ENST00000530384 CDK11AQ9UQ88 783 aaPredicted RBP27.53■■■□□ 2
CCS-205ENST00000530384 PCF11O94913 1555 aaKnown RBP27.52■■■□□ 2
CCS-205ENST00000530384 COL17A1Q9UMD9 1497 aaPredicted RBP27.51■■■□□ 2
CCS-205ENST00000530384 LRRIQ1Q96JM4 1722 aa27.5■■□□□ 1.99
CCS-205ENST00000530384 CCDC18Q5T9S5 1454 aa27.48■■□□□ 1.99
CCS-205ENST00000530384 FYCO1Q9BQS8 1478 aa27.48■■□□□ 1.99
CCS-205ENST00000530384 CEP162Q5TB80 1403 aa27.48■■□□□ 1.99
CCS-205ENST00000530384 PHLDB1Q86UU1 1377 aa27.47■■□□□ 1.99
CCS-205ENST00000530384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.46■■□□□ 1.99
CCS-205ENST00000530384 NEO1Q92859 1461 aa27.44■■□□□ 1.98
CCS-205ENST00000530384 TTC37Q6PGP7 1564 aa27.43■■□□□ 1.98
CCS-205ENST00000530384 ARAP3Q8WWN8 1544 aa27.42■■□□□ 1.98
CCS-205ENST00000530384 LOC105371045A0A1W2PR82 267 aa27.42■■□□□ 1.98
CCS-205ENST00000530384 AEBP2Q6ZN18 517 aaPredicted RBP27.42■■□□□ 1.98
CCS-205ENST00000530384 TROQ12816 1431 aaPredicted RBP27.41■■□□□ 1.98
CCS-205ENST00000530384 KIF14Q15058 1648 aa27.38■■□□□ 1.97
CCS-205ENST00000530384 CFAP74Q9C0B2 1584 aa27.36■■□□□ 1.97
CCS-205ENST00000530384 FANCAO15360 1455 aa27.33■■□□□ 1.97
CCS-205ENST00000530384 MYO5CQ9NQX4 1742 aa27.31■■□□□ 1.96
CCS-205ENST00000530384 PLCH2O75038 1416 aa27.31■■□□□ 1.96
CCS-205ENST00000530384 AKNAQ7Z591 1439 aa27.29■■□□□ 1.96
CCS-205ENST00000530384 RAPGEF3O95398 923 aa27.23■■□□□ 1.95
CCS-205ENST00000530384 DENND4BO75064 1496 aaPredicted RBP27.23■■□□□ 1.95
CCS-205ENST00000530384 EFCAB2Q5VUJ9 269 aa27.22■■□□□ 1.95
CCS-205ENST00000530384 FRMPD1Q5SYB0 1578 aa27.21■■□□□ 1.95
CCS-205ENST00000530384 ADGRL1O94910 1474 aa27.19■■□□□ 1.94
CCS-205ENST00000530384 RICTORQ6R327 1708 aa27.19■■□□□ 1.94
CCS-205ENST00000530384 ARHGAP5Q13017 1502 aa27.18■■□□□ 1.94
CCS-205ENST00000530384 KDM4FA0A1W2PPD8 638 aa27.18■■□□□ 1.94
CCS-205ENST00000530384 VPS8Q8N3P4 1428 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms