RNA–Protein interactions for RNA: ENST00000530302.1

CLINT1-209, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-209ENST00000530302 CEP170Q5SW79 1584 aa12.62□□□□□ -0.39
CLINT1-209ENST00000530302 KIF27Q86VH2 1401 aa12.61□□□□□ -0.39
CLINT1-209ENST00000530302 NUP160Q12769 1436 aa12.59□□□□□ -0.39
CLINT1-209ENST00000530302 IGF1RP08069 1367 aa12.58□□□□□ -0.4
CLINT1-209ENST00000530302 RUSC2Q8N2Y8 1516 aa12.58□□□□□ -0.4
CLINT1-209ENST00000530302 CUL7Q14999 1698 aa12.57□□□□□ -0.4
CLINT1-209ENST00000530302 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
CLINT1-209ENST00000530302 ARAP1Q96P48 1450 aa12.56□□□□□ -0.4
CLINT1-209ENST00000530302 ERCC6L2Q5T890 1561 aa12.54□□□□□ -0.4
CLINT1-209ENST00000530302 SHROOM2Q13796 1616 aa12.53□□□□□ -0.4
CLINT1-209ENST00000530302 CARMIL1Q5VZK9 1371 aa12.49□□□□□ -0.41
CLINT1-209ENST00000530302 CYB5RLQ6IPT4 315 aa12.47□□□□□ -0.41
CLINT1-209ENST00000530302 KIAA0586Q9BVV6 1533 aa12.43□□□□□ -0.42
CLINT1-209ENST00000530302 PRG4Q92954 1404 aaPredicted RBP12.43□□□□□ -0.42
CLINT1-209ENST00000530302 RAPGEF2Q9Y4G8 1499 aa12.42□□□□□ -0.42
CLINT1-209ENST00000530302 PRXQ9BXM0 1461 aa12.4□□□□□ -0.42
CLINT1-209ENST00000530302 JPH4Q96JJ6 628 aa12.4□□□□□ -0.42
CLINT1-209ENST00000530302 IQGAP2Q13576 1575 aa12.39□□□□□ -0.43
CLINT1-209ENST00000530302 CTTNBP2Q8WZ74 1663 aa12.36□□□□□ -0.43
CLINT1-209ENST00000530302 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
CLINT1-209ENST00000530302 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
CLINT1-209ENST00000530302 EEA1Q15075 1411 aa12.32□□□□□ -0.44
CLINT1-209ENST00000530302 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
CLINT1-209ENST00000530302 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
CLINT1-209ENST00000530302 UGGT2Q9NYU1 1516 aa12.32□□□□□ -0.44
CLINT1-209ENST00000530302 ADCY10Q96PN6 1610 aa12.3□□□□□ -0.44
CLINT1-209ENST00000530302 KIAA0556O60303 1618 aa12.29□□□□□ -0.44
CLINT1-209ENST00000530302 KIF21BO75037 1637 aa12.27□□□□□ -0.44
CLINT1-209ENST00000530302 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
CLINT1-209ENST00000530302 CARMIL2Q6F5E8 1435 aa12.25□□□□□ -0.45
CLINT1-209ENST00000530302 PTPRGP23470 1445 aa12.24□□□□□ -0.45
CLINT1-209ENST00000530302 TTBK1Q5TCY1 1321 aaPredicted RBP12.24□□□□□ -0.45
CLINT1-209ENST00000530302 TNIKQ9UKE5 1360 aa12.24□□□□□ -0.45
CLINT1-209ENST00000530302 SAMD9Q5K651 1589 aa12.21□□□□□ -0.46
CLINT1-209ENST00000530302 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
CLINT1-209ENST00000530302 EHMT2Q96KQ7 1210 aa12.2□□□□□ -0.46
CLINT1-209ENST00000530302 KIF13AQ9H1H9 1805 aa12.19□□□□□ -0.46
CLINT1-209ENST00000530302 ABCC2Q92887 1545 aa12.18□□□□□ -0.46
CLINT1-209ENST00000530302 GOLGA3Q08378 1498 aa12.18□□□□□ -0.46
CLINT1-209ENST00000530302 MAPKBP1O60336 1514 aa12.17□□□□□ -0.46
CLINT1-209ENST00000530302 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
CLINT1-209ENST00000530302 PLB1Q6P1J6 1458 aa12.17□□□□□ -0.46
CLINT1-209ENST00000530302 UACAQ9BZF9 1416 aa12.17□□□□□ -0.46
CLINT1-209ENST00000530302 ABCA8O94911 1581 aa12.15□□□□□ -0.46
CLINT1-209ENST00000530302 P3H3Q8IVL6 736 aa12.15□□□□□ -0.46
CLINT1-209ENST00000530302 DIP2BQ9P265 1576 aa12.14□□□□□ -0.47
CLINT1-209ENST00000530302 RANGAP1P46060 587 aaPredicted RBP12.14□□□□□ -0.47
CLINT1-209ENST00000530302 ZCCHC11Q5TAX3 1644 aaKnown RBP12.14□□□□□ -0.47
CLINT1-209ENST00000530302 FHOD3Q2V2M9 1422 aa12.12□□□□□ -0.47
CLINT1-209ENST00000530302 KDM5BQ9UGL1 1544 aa12.12□□□□□ -0.47
CLINT1-209ENST00000530302 ABCC10Q5T3U5 1492 aa12.11□□□□□ -0.47
CLINT1-209ENST00000530302 ASXL2Q76L83 1435 aa12.1□□□□□ -0.47
CLINT1-209ENST00000530302 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLINT1-209ENST00000530302 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
CLINT1-209ENST00000530302 EFCAB5A4FU69 1503 aa12.09□□□□□ -0.47
CLINT1-209ENST00000530302 RAPGEF6Q8TEU7 1601 aa12.08□□□□□ -0.48
CLINT1-209ENST00000530302 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
CLINT1-209ENST00000530302 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
CLINT1-209ENST00000530302 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
CLINT1-209ENST00000530302 FAM69CQ0P6D2 419 aa12.05□□□□□ -0.48
CLINT1-209ENST00000530302 NUP153P49790 1475 aaKnown RBP12.04□□□□□ -0.48
CLINT1-209ENST00000530302 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
CLINT1-209ENST00000530302 PPRC1Q5VV67 1664 aaKnown RBP12.03□□□□□ -0.48
CLINT1-209ENST00000530302 ATP10BO94823 1461 aa12.03□□□□□ -0.48
CLINT1-209ENST00000530302 WDR7Q9Y4E6 1490 aa12.03□□□□□ -0.48
CLINT1-209ENST00000530302 EPRSP07814 1512 aaKnown RBP12.03□□□□□ -0.48
CLINT1-209ENST00000530302 GLI2P10070 1586 aa12.02□□□□□ -0.49
CLINT1-209ENST00000530302 MAP3K4Q9Y6R4 1608 aa12□□□□□ -0.49
CLINT1-209ENST00000530302 LRRIQ1Q96JM4 1722 aa11.98□□□□□ -0.49
CLINT1-209ENST00000530302 CDK13Q14004 1512 aaKnown RBP11.97□□□□□ -0.49
CLINT1-209ENST00000530302 PCF11O94913 1555 aaKnown RBP11.96□□□□□ -0.5
CLINT1-209ENST00000530302 CLIP1P30622 1438 aa11.95□□□□□ -0.5
CLINT1-209ENST00000530302 HECW1Q76N89 1606 aa11.95□□□□□ -0.5
CLINT1-209ENST00000530302 FMN1Q68DA7 1419 aa11.94□□□□□ -0.5
CLINT1-209ENST00000530302 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
CLINT1-209ENST00000530302 KCNH8Q96L42 1107 aa11.93□□□□□ -0.5
CLINT1-209ENST00000530302 KDM6BO15054 1643 aa11.93□□□□□ -0.5
CLINT1-209ENST00000530302 LOC105371045A0A1W2PR82 267 aa11.92□□□□□ -0.5
CLINT1-209ENST00000530302 ABCA9Q8IUA7 1624 aa11.92□□□□□ -0.5
CLINT1-209ENST00000530302 POTEHQ6S545 545 aa11.91□□□□□ -0.5
CLINT1-209ENST00000530302 CEP162Q5TB80 1403 aa11.91□□□□□ -0.5
CLINT1-209ENST00000530302 COL17A1Q9UMD9 1497 aaPredicted RBP11.9□□□□□ -0.5
CLINT1-209ENST00000530302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
CLINT1-209ENST00000530302 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
CLINT1-209ENST00000530302 TTC37Q6PGP7 1564 aa11.89□□□□□ -0.51
CLINT1-209ENST00000530302 CD109Q6YHK3 1445 aa11.89□□□□□ -0.51
CLINT1-209ENST00000530302 CASKIN1Q8WXD9 1431 aa11.88□□□□□ -0.51
CLINT1-209ENST00000530302 MAGI3Q5TCQ9 1506 aa11.88□□□□□ -0.51
CLINT1-209ENST00000530302 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLINT1-209ENST00000530302 KIF14Q15058 1648 aa11.87□□□□□ -0.51
CLINT1-209ENST00000530302 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
CLINT1-209ENST00000530302 TEX14Q8IWB6 1497 aa11.87□□□□□ -0.51
CLINT1-209ENST00000530302 FYCO1Q9BQS8 1478 aa11.86□□□□□ -0.51
CLINT1-209ENST00000530302 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
CLINT1-209ENST00000530302 PLEKHD1A6NEE1 506 aa11.83□□□□□ -0.52
CLINT1-209ENST00000530302 CCDC18Q5T9S5 1454 aa11.82□□□□□ -0.52
CLINT1-209ENST00000530302 TROQ12816 1431 aaPredicted RBP11.81□□□□□ -0.52
CLINT1-209ENST00000530302 DCAF8L1A6NGE4 600 aa11.81□□□□□ -0.52
CLINT1-209ENST00000530302 FRMPD1Q5SYB0 1578 aa11.79□□□□□ -0.52
CLINT1-209ENST00000530302 C1QBPQ07021 282 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms