RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 JPH4Q96JJ6 628 aa32.2■■■□□ 2.75
PCNX3-203ENST00000530174 PRG4Q92954 1404 aaPredicted RBP32.18■■■□□ 2.74
PCNX3-203ENST00000530174 KIAA0586Q9BVV6 1533 aa32.15■■■□□ 2.74
PCNX3-203ENST00000530174 TRHP20396 242 aaPredicted RBP32.05■■■□□ 2.72
PCNX3-203ENST00000530174 RAPGEF2Q9Y4G8 1499 aa32■■■□□ 2.71
PCNX3-203ENST00000530174 IQGAP2Q13576 1575 aa31.93■■■□□ 2.7
PCNX3-203ENST00000530174 PRXQ9BXM0 1461 aa31.81■■■□□ 2.68
PCNX3-203ENST00000530174 CARMIL2Q6F5E8 1435 aa31.81■■■□□ 2.68
PCNX3-203ENST00000530174 ADCY10Q96PN6 1610 aa31.76■■■□□ 2.67
PCNX3-203ENST00000530174 PTPRGP23470 1445 aa31.75■■■□□ 2.67
PCNX3-203ENST00000530174 TNIKQ9UKE5 1360 aa31.74■■■□□ 2.67
PCNX3-203ENST00000530174 DISP1Q96F81 1524 aa31.74■■■□□ 2.67
PCNX3-203ENST00000530174 UGGT2Q9NYU1 1516 aa31.74■■■□□ 2.67
PCNX3-203ENST00000530174 CTTNBP2Q8WZ74 1663 aa31.73■■■□□ 2.67
PCNX3-203ENST00000530174 TTBK1Q5TCY1 1321 aaPredicted RBP31.7■■■□□ 2.66
PCNX3-203ENST00000530174 CSRNP3Q8WYN3 585 aa31.67■■■□□ 2.66
PCNX3-203ENST00000530174 NPM1P06748 294 aaKnown RBP eCLIP31.66■■■□□ 2.66
PCNX3-203ENST00000530174 EEA1Q15075 1411 aa31.64■■■□□ 2.66
PCNX3-203ENST00000530174 KIAA0556O60303 1618 aa31.64■■■□□ 2.65
PCNX3-203ENST00000530174 MAPKBP1O60336 1514 aa31.61■■■□□ 2.65
PCNX3-203ENST00000530174 KIF13AQ9H1H9 1805 aa31.57■■■□□ 2.64
PCNX3-203ENST00000530174 CHIC1Q5VXU3 224 aa31.55■■■□□ 2.64
PCNX3-203ENST00000530174 UACAQ9BZF9 1416 aa31.53■■■□□ 2.64
PCNX3-203ENST00000530174 ABCC2Q92887 1545 aa31.52■■■□□ 2.64
PCNX3-203ENST00000530174 UHRF1BP1LA0JNW5 1464 aa31.52■■■□□ 2.64
PCNX3-203ENST00000530174 GOLGA3Q08378 1498 aa31.52■■■□□ 2.64
PCNX3-203ENST00000530174 ABCC10Q5T3U5 1492 aa31.52■■■□□ 2.64
PCNX3-203ENST00000530174 FAM9AQ8IZU1 332 aaPredicted RBP31.51■■■□□ 2.63
PCNX3-203ENST00000530174 DIP2BQ9P265 1576 aa31.47■■■□□ 2.63
PCNX3-203ENST00000530174 FAM69CQ0P6D2 419 aa31.45■■■□□ 2.63
PCNX3-203ENST00000530174 KDM5BQ9UGL1 1544 aa31.38■■■□□ 2.61
PCNX3-203ENST00000530174 KIF21BO75037 1637 aa31.37■■■□□ 2.61
PCNX3-203ENST00000530174 PLB1Q6P1J6 1458 aa31.36■■■□□ 2.61
PCNX3-203ENST00000530174 ASXL2Q76L83 1435 aa31.36■■■□□ 2.61
PCNX3-203ENST00000530174 ZCCHC11Q5TAX3 1644 aaKnown RBP31.31■■■□□ 2.6
PCNX3-203ENST00000530174 ABCA8O94911 1581 aa31.31■■■□□ 2.6
PCNX3-203ENST00000530174 SAMD9Q5K651 1589 aa31.3■■■□□ 2.6
PCNX3-203ENST00000530174 P3H3Q8IVL6 736 aa31.29■■■□□ 2.6
PCNX3-203ENST00000530174 TSPOAP1O95153 1857 aa31.21■■■□□ 2.59
PCNX3-203ENST00000530174 GLI2P10070 1586 aa31.21■■■□□ 2.59
PCNX3-203ENST00000530174 RANGAP1P46060 587 aaPredicted RBP31.2■■■□□ 2.59
PCNX3-203ENST00000530174 EPRSP07814 1512 aaKnown RBP31.18■■■□□ 2.58
PCNX3-203ENST00000530174 EHMT2Q96KQ7 1210 aa31.15■■■□□ 2.58
PCNX3-203ENST00000530174 WDR7Q9Y4E6 1490 aa31.14■■■□□ 2.58
PCNX3-203ENST00000530174 FHOD3Q2V2M9 1422 aa31.11■■■□□ 2.57
PCNX3-203ENST00000530174 UBTFP17480 764 aaKnown RBP31.09■■■□□ 2.57
PCNX3-203ENST00000530174 EFCAB5A4FU69 1503 aa31.08■■■□□ 2.57
PCNX3-203ENST00000530174 PPRC1Q5VV67 1664 aaKnown RBP31.08■■■□□ 2.57
PCNX3-203ENST00000530174 RAPGEF6Q8TEU7 1601 aa31.07■■■□□ 2.56
PCNX3-203ENST00000530174 MAP3K4Q9Y6R4 1608 aa31.06■■■□□ 2.56
PCNX3-203ENST00000530174 ARID3CA6NKF2 412 aa31.06■■■□□ 2.56
PCNX3-203ENST00000530174 KDM6BO15054 1643 aa31.05■■■□□ 2.56
PCNX3-203ENST00000530174 ATP10BO94823 1461 aa31.04■■■□□ 2.56
PCNX3-203ENST00000530174 KCNH8Q96L42 1107 aa30.97■■■□□ 2.55
PCNX3-203ENST00000530174 NUP153P49790 1475 aaKnown RBP30.96■■■□□ 2.55
PCNX3-203ENST00000530174 TEX14Q8IWB6 1497 aa30.93■■■□□ 2.54
PCNX3-203ENST00000530174 CFAP43Q8NDM7 1665 aa30.91■■■□□ 2.54
PCNX3-203ENST00000530174 CD109Q6YHK3 1445 aa30.89■■■□□ 2.53
PCNX3-203ENST00000530174 ARHGAP35Q9NRY4 1499 aa30.89■■■□□ 2.53
PCNX3-203ENST00000530174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.87■■■□□ 2.53
PCNX3-203ENST00000530174 HNRNPUL2Q1KMD3 747 aaKnown RBP30.87■■■□□ 2.53
PCNX3-203ENST00000530174 MAGI3Q5TCQ9 1506 aa30.84■■■□□ 2.53
PCNX3-203ENST00000530174 COL17A1Q9UMD9 1497 aaPredicted RBP30.82■■■□□ 2.52
PCNX3-203ENST00000530174 FMN1Q68DA7 1419 aa30.79■■■□□ 2.52
PCNX3-203ENST00000530174 ABCA9Q8IUA7 1624 aa30.78■■■□□ 2.52
PCNX3-203ENST00000530174 CDK13Q14004 1512 aaKnown RBP30.73■■■□□ 2.51
PCNX3-203ENST00000530174 PLEKHD1A6NEE1 506 aa30.71■■■□□ 2.51
PCNX3-203ENST00000530174 HECW1Q76N89 1606 aa30.7■■■□□ 2.51
PCNX3-203ENST00000530174 AEBP2Q6ZN18 517 aaPredicted RBP30.69■■■□□ 2.5
PCNX3-203ENST00000530174 ATP1B4Q9UN42 357 aaPredicted RBP30.66■■■□□ 2.5
PCNX3-203ENST00000530174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.58■■■□□ 2.49
PCNX3-203ENST00000530174 ARAP3Q8WWN8 1544 aa30.58■■■□□ 2.49
PCNX3-203ENST00000530174 CLIP1P30622 1438 aa30.58■■■□□ 2.49
PCNX3-203ENST00000530174 NEO1Q92859 1461 aa30.56■■■□□ 2.48
PCNX3-203ENST00000530174 PHLDB1Q86UU1 1377 aa30.55■■■□□ 2.48
PCNX3-203ENST00000530174 PCF11O94913 1555 aaKnown RBP30.55■■■□□ 2.48
PCNX3-203ENST00000530174 TTC37Q6PGP7 1564 aa30.55■■■□□ 2.48
PCNX3-203ENST00000530174 LRRIQ1Q96JM4 1722 aa30.54■■■□□ 2.48
PCNX3-203ENST00000530174 CASKIN1Q8WXD9 1431 aa30.53■■■□□ 2.48
PCNX3-203ENST00000530174 KDM4FA0A1W2PPD8 638 aa30.5■■■□□ 2.47
PCNX3-203ENST00000530174 CDK11AQ9UQ88 783 aaPredicted RBP30.5■■■□□ 2.47
PCNX3-203ENST00000530174 TROQ12816 1431 aaPredicted RBP30.45■■■□□ 2.46
PCNX3-203ENST00000530174 FANCAO15360 1455 aa30.44■■■□□ 2.46
PCNX3-203ENST00000530174 CCDC18Q5T9S5 1454 aa30.44■■■□□ 2.46
PCNX3-203ENST00000530174 FYCO1Q9BQS8 1478 aa30.44■■■□□ 2.46
PCNX3-203ENST00000530174 CFAP74Q9C0B2 1584 aa30.43■■■□□ 2.46
PCNX3-203ENST00000530174 RAPGEF3O95398 923 aa30.42■■■□□ 2.46
PCNX3-203ENST00000530174 KIF14Q15058 1648 aa30.42■■■□□ 2.46
PCNX3-203ENST00000530174 AKNAQ7Z591 1439 aa30.4■■■□□ 2.46
PCNX3-203ENST00000530174 ADGRL1O94910 1474 aa30.4■■■□□ 2.46
PCNX3-203ENST00000530174 FRMPD1Q5SYB0 1578 aa30.4■■■□□ 2.46
PCNX3-203ENST00000530174 PLCH2O75038 1416 aa30.39■■■□□ 2.45
PCNX3-203ENST00000530174 CEP162Q5TB80 1403 aa30.37■■■□□ 2.45
PCNX3-203ENST00000530174 DENND4BO75064 1496 aaPredicted RBP30.35■■■□□ 2.45
PCNX3-203ENST00000530174 MYO5CQ9NQX4 1742 aa30.35■■■□□ 2.45
PCNX3-203ENST00000530174 RICTORQ6R327 1708 aa30.31■■■□□ 2.44
PCNX3-203ENST00000530174 LOC105371045A0A1W2PR82 267 aa30.27■■■□□ 2.44
PCNX3-203ENST00000530174 EFCAB2Q5VUJ9 269 aa30.25■■■□□ 2.43
PCNX3-203ENST00000530174 SCAPERQ9BY12 1400 aa30.23■■■□□ 2.43
PCNX3-203ENST00000530174 ARHGAP5Q13017 1502 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms