RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 RTL5Q5HYW3 569 aaPredicted RBP13.63□□□□□ -0.23
CCDC90B-214ENST00000529689 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
CCDC90B-214ENST00000529689 CLSPNQ9HAW4 1339 aa13.62□□□□□ -0.23
CCDC90B-214ENST00000529689 NBR1Q14596 966 aa13.58□□□□□ -0.24
CCDC90B-214ENST00000529689 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC90B-214ENST00000529689 FOXD1Q16676 465 aa13.56□□□□□ -0.24
CCDC90B-214ENST00000529689 RAB3GAP2Q9H2M9 1393 aa13.55□□□□□ -0.24
CCDC90B-214ENST00000529689 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
CCDC90B-214ENST00000529689 CUX2O14529 1486 aa13.53□□□□□ -0.24
CCDC90B-214ENST00000529689 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
CCDC90B-214ENST00000529689 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
CCDC90B-214ENST00000529689 CARMIL1Q5VZK9 1371 aa13.52□□□□□ -0.24
CCDC90B-214ENST00000529689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.24
CCDC90B-214ENST00000529689 CCDC136Q96JN2 1154 aa13.52□□□□□ -0.25
CCDC90B-214ENST00000529689 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
CCDC90B-214ENST00000529689 ANP32EQ9BTT0 268 aa13.51□□□□□ -0.25
CCDC90B-214ENST00000529689 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
CCDC90B-214ENST00000529689 B4GALNT3Q6L9W6 998 aa13.49□□□□□ -0.25
CCDC90B-214ENST00000529689 ANP32AP39687 249 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-214ENST00000529689 RGL3Q3MIN7 710 aa13.46□□□□□ -0.25
CCDC90B-214ENST00000529689 SETD5Q9C0A6 1442 aa13.46□□□□□ -0.25
CCDC90B-214ENST00000529689 RBM19Q9Y4C8 960 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-214ENST00000529689 SMARCA4P51532 1647 aa13.44□□□□□ -0.26
CCDC90B-214ENST00000529689 PPP1R15AO75807 674 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-214ENST00000529689 SMARCA2P51531 1590 aa13.43□□□□□ -0.26
CCDC90B-214ENST00000529689 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
CCDC90B-214ENST00000529689 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
CCDC90B-214ENST00000529689 ATAD2BQ9ULI0 1458 aa13.4□□□□□ -0.26
CCDC90B-214ENST00000529689 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
CCDC90B-214ENST00000529689 TSPY4P0CV99 314 aa13.38□□□□□ -0.27
CCDC90B-214ENST00000529689 TSPY10P0CW01 314 aa13.38□□□□□ -0.27
CCDC90B-214ENST00000529689 FHOD3Q2V2M9 1422 aa13.37□□□□□ -0.27
CCDC90B-214ENST00000529689 CHMP7Q8WUX9 453 aaPredicted RBP13.36□□□□□ -0.27
CCDC90B-214ENST00000529689 CFDP1Q9UEE9 299 aaPredicted RBP13.36□□□□□ -0.27
CCDC90B-214ENST00000529689 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
CCDC90B-214ENST00000529689 ZBTB47Q9UFB7 747 aaPredicted RBP13.35□□□□□ -0.27
CCDC90B-214ENST00000529689 CHGAP10645 457 aaKnown RBP13.35□□□□□ -0.27
CCDC90B-214ENST00000529689 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
CCDC90B-214ENST00000529689 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
CCDC90B-214ENST00000529689 CARD11Q9BXL7 1154 aa13.32□□□□□ -0.28
CCDC90B-214ENST00000529689 L3MBTL2Q969R5 705 aa13.31□□□□□ -0.28
CCDC90B-214ENST00000529689 PPP4R2Q9NY27 417 aa13.31□□□□□ -0.28
CCDC90B-214ENST00000529689 KIF21BO75037 1637 aa13.29□□□□□ -0.28
CCDC90B-214ENST00000529689 ARHGAP35Q9NRY4 1499 aa13.29□□□□□ -0.28
CCDC90B-214ENST00000529689 MPHOSPH9Q99550 1183 aa13.29□□□□□ -0.28
CCDC90B-214ENST00000529689 TIMELESSQ9UNS1 1208 aa13.28□□□□□ -0.28
CCDC90B-214ENST00000529689 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.29
CCDC90B-214ENST00000529689 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
CCDC90B-214ENST00000529689 SYNJ1O43426 1573 aa13.26□□□□□ -0.29
CCDC90B-214ENST00000529689 ARXQ96QS3 562 aa13.26□□□□□ -0.29
CCDC90B-214ENST00000529689 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
CCDC90B-214ENST00000529689 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
CCDC90B-214ENST00000529689 DCAF11Q8TEB1 546 aa13.25□□□□□ -0.29
CCDC90B-214ENST00000529689 PHLDB1Q86UU1 1377 aa13.25□□□□□ -0.29
CCDC90B-214ENST00000529689 IGF1RP08069 1367 aa13.25□□□□□ -0.29
CCDC90B-214ENST00000529689 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
CCDC90B-214ENST00000529689 PKD2Q13563 968 aa13.23□□□□□ -0.29
CCDC90B-214ENST00000529689 WDR43Q15061 677 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC90B-214ENST00000529689 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
CCDC90B-214ENST00000529689 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-214ENST00000529689 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
CCDC90B-214ENST00000529689 EIF5BO60841 1220 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-214ENST00000529689 RGS3P49796 1198 aa13.16□□□□□ -0.3
CCDC90B-214ENST00000529689 NOP58Q9Y2X3 529 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-214ENST00000529689 TNNT2P45379 298 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-214ENST00000529689 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
CCDC90B-214ENST00000529689 ZNF644Q9H582 1327 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-214ENST00000529689 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-214ENST00000529689 CCDC184Q52MB2 194 aa13.13□□□□□ -0.31
CCDC90B-214ENST00000529689 FMN1Q68DA7 1419 aa13.12□□□□□ -0.31
CCDC90B-214ENST00000529689 DEKP35659 375 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-214ENST00000529689 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
CCDC90B-214ENST00000529689 KNSTRNQ9Y448 316 aa13.1□□□□□ -0.31
CCDC90B-214ENST00000529689 WASHC2AQ641Q2 1341 aa13.09□□□□□ -0.31
CCDC90B-214ENST00000529689 NEFMP07197 916 aa13.09□□□□□ -0.31
CCDC90B-214ENST00000529689 CCDC18Q5T9S5 1454 aa13.09□□□□□ -0.31
CCDC90B-214ENST00000529689 FGD5Q6ZNL6 1462 aa13.09□□□□□ -0.31
CCDC90B-214ENST00000529689 NUP155O75694 1391 aa13.08□□□□□ -0.32
CCDC90B-214ENST00000529689 PRXQ9BXM0 1461 aa13.07□□□□□ -0.32
CCDC90B-214ENST00000529689 ST20-MTHFSA0A0A6YYL1 179 aa13.07□□□□□ -0.32
CCDC90B-214ENST00000529689 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC90B-214ENST00000529689 LRRC9Q6ZRR7 1453 aa13.07□□□□□ -0.32
CCDC90B-214ENST00000529689 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-214ENST00000529689 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-214ENST00000529689 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-214ENST00000529689 PLIN1O60240 522 aa13.05□□□□□ -0.32
CCDC90B-214ENST00000529689 PLPPR3Q6T4P5 718 aa13.05□□□□□ -0.32
CCDC90B-214ENST00000529689 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
CCDC90B-214ENST00000529689 RCAN3Q9UKA8 241 aa13.04□□□□□ -0.32
CCDC90B-214ENST00000529689 WDR97A6NE52 1622 aa13.03□□□□□ -0.32
CCDC90B-214ENST00000529689 NUDCQ9Y266 331 aa13.03□□□□□ -0.32
CCDC90B-214ENST00000529689 FGD6Q6ZV73 1430 aa13.03□□□□□ -0.32
CCDC90B-214ENST00000529689 UPF2Q9HAU5 1272 aaKnown RBP13□□□□□ -0.33
CCDC90B-214ENST00000529689 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
CCDC90B-214ENST00000529689 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
CCDC90B-214ENST00000529689 CUX1P39880 1505 aa13□□□□□ -0.33
CCDC90B-214ENST00000529689 EXOC6Q8TAG9 804 aa12.99□□□□□ -0.33
CCDC90B-214ENST00000529689 HSP90AA1P07900 732 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-214ENST00000529689 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
CCDC90B-214ENST00000529689 PPM1GO15355 546 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms