RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 PBRM1Q86U86 1689 aa25.81■■□□□ 1.72
CAPRIN1-207ENST00000529307 GRIN2BQ13224 1484 aa25.76■■□□□ 1.71
CAPRIN1-207ENST00000529307 SCAF1Q9H7N4 1312 aaKnown RBP25.74■■□□□ 1.71
CAPRIN1-207ENST00000529307 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
CAPRIN1-207ENST00000529307 CTTNBP2Q8WZ74 1663 aa25.71■■□□□ 1.71
CAPRIN1-207ENST00000529307 ADAMTS12P58397 1594 aa25.71■■□□□ 1.71
CAPRIN1-207ENST00000529307 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
CAPRIN1-207ENST00000529307 APLP2Q06481 763 aa25.63■■□□□ 1.69
CAPRIN1-207ENST00000529307 P3H3Q8IVL6 736 aa25.62■■□□□ 1.69
CAPRIN1-207ENST00000529307 SNAPC4Q5SXM2 1469 aa25.61■■□□□ 1.69
CAPRIN1-207ENST00000529307 EFCAB5A4FU69 1503 aa25.58■■□□□ 1.69
CAPRIN1-207ENST00000529307 FHOD3Q2V2M9 1422 aa25.58■■□□□ 1.69
CAPRIN1-207ENST00000529307 KANK4Q5T7N3 995 aaPredicted RBP25.54■■□□□ 1.68
CAPRIN1-207ENST00000529307 SAMD9Q5K651 1589 aa25.51■■□□□ 1.67
CAPRIN1-207ENST00000529307 MAGI1Q96QZ7 1491 aaPredicted RBP25.49■■□□□ 1.67
CAPRIN1-207ENST00000529307 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
CAPRIN1-207ENST00000529307 PCF11O94913 1555 aaKnown RBP25.46■■□□□ 1.67
CAPRIN1-207ENST00000529307 IQGAP2Q13576 1575 aa25.45■■□□□ 1.66
CAPRIN1-207ENST00000529307 SYNJ2O15056 1496 aa25.42■■□□□ 1.66
CAPRIN1-207ENST00000529307 TIAM1Q13009 1591 aa25.4■■□□□ 1.66
CAPRIN1-207ENST00000529307 MAP3K1Q13233 1512 aa25.39■■□□□ 1.66
CAPRIN1-207ENST00000529307 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.65
CAPRIN1-207ENST00000529307 CASKIN1Q8WXD9 1431 aa25.38■■□□□ 1.65
CAPRIN1-207ENST00000529307 FMN1Q68DA7 1419 aa25.38■■□□□ 1.65
CAPRIN1-207ENST00000529307 KIAA0586Q9BVV6 1533 aa25.38■■□□□ 1.65
CAPRIN1-207ENST00000529307 FYCO1Q9BQS8 1478 aa25.37■■□□□ 1.65
CAPRIN1-207ENST00000529307 UGGT2Q9NYU1 1516 aa25.34■■□□□ 1.65
CAPRIN1-207ENST00000529307 FBLN2P98095 1184 aa25.34■■□□□ 1.65
CAPRIN1-207ENST00000529307 CEP170Q5SW79 1584 aa25.33■■□□□ 1.65
CAPRIN1-207ENST00000529307 ATP1B4Q9UN42 357 aaPredicted RBP25.33■■□□□ 1.65
CAPRIN1-207ENST00000529307 LRRC9Q6ZRR7 1453 aa25.3■■□□□ 1.64
CAPRIN1-207ENST00000529307 CFAP43Q8NDM7 1665 aa25.3■■□□□ 1.64
CAPRIN1-207ENST00000529307 NUP160Q12769 1436 aa25.28■■□□□ 1.64
CAPRIN1-207ENST00000529307 DISP1Q96F81 1524 aa25.26■■□□□ 1.63
CAPRIN1-207ENST00000529307 ZEB1P37275 1124 aaPredicted RBP25.22■■□□□ 1.63
CAPRIN1-207ENST00000529307 HNRNPUL2Q1KMD3 747 aaKnown RBP25.21■■□□□ 1.63
CAPRIN1-207ENST00000529307 KIAA0556O60303 1618 aa25.21■■□□□ 1.63
CAPRIN1-207ENST00000529307 RRBP1Q9P2E9 1410 aaKnown RBP25.21■■□□□ 1.63
CAPRIN1-207ENST00000529307 LRRIQ1Q96JM4 1722 aa25.21■■□□□ 1.63
CAPRIN1-207ENST00000529307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.2■■□□□ 1.62
CAPRIN1-207ENST00000529307 PHLDB1Q86UU1 1377 aa25.15■■□□□ 1.62
CAPRIN1-207ENST00000529307 JPH4Q96JJ6 628 aa25.12■■□□□ 1.61
CAPRIN1-207ENST00000529307 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
CAPRIN1-207ENST00000529307 CHD1O14646 1710 aa25.09■■□□□ 1.61
CAPRIN1-207ENST00000529307 HECW1Q76N89 1606 aa25.08■■□□□ 1.61
CAPRIN1-207ENST00000529307 CCER1Q8TC90 406 aaPredicted RBP25.05■■□□□ 1.6
CAPRIN1-207ENST00000529307 EPRSP07814 1512 aaKnown RBP25.05■■□□□ 1.6
CAPRIN1-207ENST00000529307 MTUS2Q5JR59 1369 aa25.05■■□□□ 1.6
CAPRIN1-207ENST00000529307 CCDC18Q5T9S5 1454 aa25.04■■□□□ 1.6
CAPRIN1-207ENST00000529307 MAGI3Q5TCQ9 1506 aa25.04■■□□□ 1.6
CAPRIN1-207ENST00000529307 CDK13Q14004 1512 aaKnown RBP25.02■■□□□ 1.6
CAPRIN1-207ENST00000529307 CARMIL2Q6F5E8 1435 aa25.01■■□□□ 1.59
CAPRIN1-207ENST00000529307 ACIN1Q9UKV3 1341 aaKnown RBP25■■□□□ 1.59
CAPRIN1-207ENST00000529307 ARID3CA6NKF2 412 aa25■■□□□ 1.59
CAPRIN1-207ENST00000529307 NUP153P49790 1475 aaKnown RBP24.98■■□□□ 1.59
CAPRIN1-207ENST00000529307 EHBP1L1Q8N3D4 1523 aa24.97■■□□□ 1.59
CAPRIN1-207ENST00000529307 RAPGEF6Q8TEU7 1601 aa24.97■■□□□ 1.59
CAPRIN1-207ENST00000529307 PLB1Q6P1J6 1458 aa24.95■■□□□ 1.59
CAPRIN1-207ENST00000529307 NCOA2Q15596 1464 aa24.95■■□□□ 1.58
CAPRIN1-207ENST00000529307 PRG4Q92954 1404 aaPredicted RBP24.94■■□□□ 1.58
CAPRIN1-207ENST00000529307 ITGAEP38570 1179 aa24.93■■□□□ 1.58
CAPRIN1-207ENST00000529307 ARHGEF11O15085 1522 aa24.9■■□□□ 1.58
CAPRIN1-207ENST00000529307 SUPT6HQ7KZ85 1726 aaKnown RBP24.9■■□□□ 1.58
CAPRIN1-207ENST00000529307 FAM50AQ14320 339 aaKnown RBP24.9■■□□□ 1.58
CAPRIN1-207ENST00000529307 FGD6Q6ZV73 1430 aa24.89■■□□□ 1.58
CAPRIN1-207ENST00000529307 SHROOM2Q13796 1616 aa24.87■■□□□ 1.57
CAPRIN1-207ENST00000529307 MYOM3Q5VTT5 1437 aa24.85■■□□□ 1.57
CAPRIN1-207ENST00000529307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.84■■□□□ 1.57
CAPRIN1-207ENST00000529307 ABCA8O94911 1581 aa24.83■■□□□ 1.57
CAPRIN1-207ENST00000529307 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
CAPRIN1-207ENST00000529307 NEUROD1Q13562 356 aa24.8■■□□□ 1.56
CAPRIN1-207ENST00000529307 ERCC6L2Q5T890 1561 aa24.8■■□□□ 1.56
CAPRIN1-207ENST00000529307 PTPRGP23470 1445 aa24.79■■□□□ 1.56
CAPRIN1-207ENST00000529307 GTF3C3Q9Y5Q9 886 aa24.74■■□□□ 1.55
CAPRIN1-207ENST00000529307 CDK11AQ9UQ88 783 aaPredicted RBP24.73■■□□□ 1.55
CAPRIN1-207ENST00000529307 PTPN23Q9H3S7 1636 aa24.72■■□□□ 1.55
CAPRIN1-207ENST00000529307 ATP10BO94823 1461 aa24.72■■□□□ 1.55
CAPRIN1-207ENST00000529307 TROQ12816 1431 aaPredicted RBP24.72■■□□□ 1.55
CAPRIN1-207ENST00000529307 DHX57Q6P158 1386 aaKnown RBP24.72■■□□□ 1.55
CAPRIN1-207ENST00000529307 PTPRKQ15262 1439 aa24.71■■□□□ 1.55
CAPRIN1-207ENST00000529307 RAB3GAP2Q9H2M9 1393 aa24.71■■□□□ 1.55
CAPRIN1-207ENST00000529307 TCOF1Q13428 1488 aaKnown RBP24.68■■□□□ 1.54
CAPRIN1-207ENST00000529307 SETD5Q9C0A6 1442 aa24.68■■□□□ 1.54
CAPRIN1-207ENST00000529307 MIA2Q96PC5 1412 aa24.66■■□□□ 1.54
CAPRIN1-207ENST00000529307 UACAQ9BZF9 1416 aa24.65■■□□□ 1.54
CAPRIN1-207ENST00000529307 CENPBP07199 599 aaPredicted RBP24.64■■□□□ 1.53
CAPRIN1-207ENST00000529307 KIF14Q15058 1648 aa24.63■■□□□ 1.53
CAPRIN1-207ENST00000529307 ADCY10Q96PN6 1610 aa24.61■■□□□ 1.53
CAPRIN1-207ENST00000529307 PLEKHD1A6NEE1 506 aa24.59■■□□□ 1.53
CAPRIN1-207ENST00000529307 ZNF644Q9H582 1327 aaPredicted RBP24.55■■□□□ 1.52
CAPRIN1-207ENST00000529307 ABCC2Q92887 1545 aa24.55■■□□□ 1.52
CAPRIN1-207ENST00000529307 GPATCH8Q9UKJ3 1502 aaKnown RBP24.55■■□□□ 1.52
CAPRIN1-207ENST00000529307 CLSPNQ9HAW4 1339 aa24.54■■□□□ 1.52
CAPRIN1-207ENST00000529307 HFM1A2PYH4 1435 aa24.54■■□□□ 1.52
CAPRIN1-207ENST00000529307 ABCC10Q5T3U5 1492 aa24.52■■□□□ 1.52
CAPRIN1-207ENST00000529307 NAIPQ13075 1403 aa24.5■■□□□ 1.51
CAPRIN1-207ENST00000529307 CHIC2Q9UKJ5 165 aa24.49■■□□□ 1.51
CAPRIN1-207ENST00000529307 CFDP1Q9UEE9 299 aaPredicted RBP24.48■■□□□ 1.51
CAPRIN1-207ENST00000529307 ITSN2Q9NZM3 1697 aa24.47■■□□□ 1.51
CAPRIN1-207ENST00000529307 OSCARQ8IYS5 282 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms