RNA–Protein interactions for RNA: ENST00000529268.1

PDGFD-203, Transcript of platelet derived growth factor D, humanhuman

TSL 5

Gene PDGFD, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-203ENST00000529268 SHROOM2Q13796 1616 aa17.86■□□□□ 0.45
PDGFD-203ENST00000529268 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
PDGFD-203ENST00000529268 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
PDGFD-203ENST00000529268 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
PDGFD-203ENST00000529268 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
PDGFD-203ENST00000529268 RUSC2Q8N2Y8 1516 aa17.76■□□□□ 0.43
PDGFD-203ENST00000529268 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
PDGFD-203ENST00000529268 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
PDGFD-203ENST00000529268 PTPRGP23470 1445 aa17.71■□□□□ 0.43
PDGFD-203ENST00000529268 CUL7Q14999 1698 aa17.71■□□□□ 0.42
PDGFD-203ENST00000529268 TNIKQ9UKE5 1360 aa17.65■□□□□ 0.42
PDGFD-203ENST00000529268 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.42
PDGFD-203ENST00000529268 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
PDGFD-203ENST00000529268 ABCC10Q5T3U5 1492 aa17.62■□□□□ 0.41
PDGFD-203ENST00000529268 ADCY10Q96PN6 1610 aa17.59■□□□□ 0.41
PDGFD-203ENST00000529268 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
PDGFD-203ENST00000529268 IQGAP2Q13576 1575 aa17.56■□□□□ 0.4
PDGFD-203ENST00000529268 DISP1Q96F81 1524 aa17.55■□□□□ 0.4
PDGFD-203ENST00000529268 UACAQ9BZF9 1416 aa17.53■□□□□ 0.4
PDGFD-203ENST00000529268 KIF13AQ9H1H9 1805 aa17.51■□□□□ 0.39
PDGFD-203ENST00000529268 ABCC2Q92887 1545 aa17.51■□□□□ 0.39
PDGFD-203ENST00000529268 UGGT2Q9NYU1 1516 aa17.49■□□□□ 0.39
PDGFD-203ENST00000529268 UHRF1BP1LA0JNW5 1464 aa17.49■□□□□ 0.39
PDGFD-203ENST00000529268 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
PDGFD-203ENST00000529268 DIP2BQ9P265 1576 aa17.48■□□□□ 0.39
PDGFD-203ENST00000529268 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
PDGFD-203ENST00000529268 PRXQ9BXM0 1461 aa17.46■□□□□ 0.39
PDGFD-203ENST00000529268 PLB1Q6P1J6 1458 aa17.45■□□□□ 0.38
PDGFD-203ENST00000529268 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
PDGFD-203ENST00000529268 KDM5BQ9UGL1 1544 aa17.41■□□□□ 0.38
PDGFD-203ENST00000529268 KIAA0556O60303 1618 aa17.39■□□□□ 0.37
PDGFD-203ENST00000529268 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
PDGFD-203ENST00000529268 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
PDGFD-203ENST00000529268 KCNH8Q96L42 1107 aa17.37■□□□□ 0.37
PDGFD-203ENST00000529268 EPRSP07814 1512 aaKnown RBP17.35■□□□□ 0.37
PDGFD-203ENST00000529268 GLI2P10070 1586 aa17.33■□□□□ 0.37
PDGFD-203ENST00000529268 KDM4FA0A1W2PPD8 638 aa17.33■□□□□ 0.36
PDGFD-203ENST00000529268 ARID3CA6NKF2 412 aa17.33■□□□□ 0.36
PDGFD-203ENST00000529268 RANGAP1P46060 587 aaPredicted RBP17.32■□□□□ 0.36
PDGFD-203ENST00000529268 KDM6BO15054 1643 aa17.32■□□□□ 0.36
PDGFD-203ENST00000529268 TSPOAP1O95153 1857 aa17.31■□□□□ 0.36
PDGFD-203ENST00000529268 POTEDQ86YR6 584 aa17.3■□□□□ 0.36
PDGFD-203ENST00000529268 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
PDGFD-203ENST00000529268 WDR7Q9Y4E6 1490 aa17.28■□□□□ 0.36
PDGFD-203ENST00000529268 ZCCHC11Q5TAX3 1644 aaKnown RBP17.27■□□□□ 0.36
PDGFD-203ENST00000529268 EEA1Q15075 1411 aa17.26■□□□□ 0.35
PDGFD-203ENST00000529268 ABCA8O94911 1581 aa17.26■□□□□ 0.35
PDGFD-203ENST00000529268 CTTNBP2Q8WZ74 1663 aa17.25■□□□□ 0.35
PDGFD-203ENST00000529268 CD109Q6YHK3 1445 aa17.23■□□□□ 0.35
PDGFD-203ENST00000529268 ATP10BO94823 1461 aa17.23■□□□□ 0.35
PDGFD-203ENST00000529268 TEX14Q8IWB6 1497 aa17.22■□□□□ 0.35
PDGFD-203ENST00000529268 PPRC1Q5VV67 1664 aaKnown RBP17.21■□□□□ 0.35
PDGFD-203ENST00000529268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
PDGFD-203ENST00000529268 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
PDGFD-203ENST00000529268 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
PDGFD-203ENST00000529268 MAP3K4Q9Y6R4 1608 aa17.18■□□□□ 0.34
PDGFD-203ENST00000529268 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
PDGFD-203ENST00000529268 UBTFP17480 764 aaKnown RBP17.15■□□□□ 0.34
PDGFD-203ENST00000529268 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
PDGFD-203ENST00000529268 SAMD9Q5K651 1589 aa17.12■□□□□ 0.33
PDGFD-203ENST00000529268 PLEKHD1A6NEE1 506 aa17.11■□□□□ 0.33
PDGFD-203ENST00000529268 NUP153P49790 1475 aaKnown RBP17.07■□□□□ 0.32
PDGFD-203ENST00000529268 ADGRL1O94910 1474 aa17.06■□□□□ 0.32
PDGFD-203ENST00000529268 RAPGEF3O95398 923 aa17.06■□□□□ 0.32
PDGFD-203ENST00000529268 PHLDB1Q86UU1 1377 aa17.04■□□□□ 0.32
PDGFD-203ENST00000529268 CFAP43Q8NDM7 1665 aa17.04■□□□□ 0.32
PDGFD-203ENST00000529268 RAPGEF6Q8TEU7 1601 aa17.04■□□□□ 0.32
PDGFD-203ENST00000529268 ATP1B4Q9UN42 357 aaPredicted RBP17.04■□□□□ 0.32
PDGFD-203ENST00000529268 KIF21BO75037 1637 aa17.03■□□□□ 0.32
PDGFD-203ENST00000529268 ARAP3Q8WWN8 1544 aa17.02■□□□□ 0.32
PDGFD-203ENST00000529268 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
PDGFD-203ENST00000529268 ABCA9Q8IUA7 1624 aa16.97■□□□□ 0.31
PDGFD-203ENST00000529268 NEO1Q92859 1461 aa16.96■□□□□ 0.31
PDGFD-203ENST00000529268 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
PDGFD-203ENST00000529268 CDK11AQ9UQ88 783 aaPredicted RBP16.93■□□□□ 0.3
PDGFD-203ENST00000529268 FMN1Q68DA7 1419 aa16.92■□□□□ 0.3
PDGFD-203ENST00000529268 AKNAQ7Z591 1439 aa16.91■□□□□ 0.3
PDGFD-203ENST00000529268 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
PDGFD-203ENST00000529268 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
PDGFD-203ENST00000529268 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.88■□□□□ 0.29
PDGFD-203ENST00000529268 FANCAO15360 1455 aa16.87■□□□□ 0.29
PDGFD-203ENST00000529268 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
PDGFD-203ENST00000529268 PLCH2O75038 1416 aa16.86■□□□□ 0.29
PDGFD-203ENST00000529268 EFCAB2Q5VUJ9 269 aa16.85■□□□□ 0.29
PDGFD-203ENST00000529268 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
PDGFD-203ENST00000529268 FRMPD1Q5SYB0 1578 aa16.8■□□□□ 0.28
PDGFD-203ENST00000529268 TTC37Q6PGP7 1564 aa16.8■□□□□ 0.28
PDGFD-203ENST00000529268 TROQ12816 1431 aaPredicted RBP16.79■□□□□ 0.28
PDGFD-203ENST00000529268 AFAP1Q8N556 730 aa16.77■□□□□ 0.28
PDGFD-203ENST00000529268 PTPRMP28827 1452 aa16.77■□□□□ 0.28
PDGFD-203ENST00000529268 YEATS2Q9ULM3 1422 aa16.77■□□□□ 0.27
PDGFD-203ENST00000529268 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
PDGFD-203ENST00000529268 MLECQ14165 292 aa16.76■□□□□ 0.27
PDGFD-203ENST00000529268 HECW2Q9P2P5 1572 aa16.76■□□□□ 0.27
PDGFD-203ENST00000529268 CASKIN1Q8WXD9 1431 aa16.75■□□□□ 0.27
PDGFD-203ENST00000529268 CLIP1P30622 1438 aa16.74■□□□□ 0.27
PDGFD-203ENST00000529268 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
PDGFD-203ENST00000529268 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
PDGFD-203ENST00000529268 MAGI2Q86UL8 1455 aa16.73■□□□□ 0.27
PDGFD-203ENST00000529268 POGZQ7Z3K3 1410 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms