RNA–Protein interactions for RNA: ENST00000529011.1

TRIM29-211, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-211ENST00000529011 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
TRIM29-211ENST00000529011 CUL7Q14999 1698 aa17.29■□□□□ 0.36
TRIM29-211ENST00000529011 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
TRIM29-211ENST00000529011 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
TRIM29-211ENST00000529011 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
TRIM29-211ENST00000529011 RAPGEF2Q9Y4G8 1499 aa17.25■□□□□ 0.35
TRIM29-211ENST00000529011 ERCC6L2Q5T890 1561 aa17.24■□□□□ 0.35
TRIM29-211ENST00000529011 FAM9AQ8IZU1 332 aaPredicted RBP17.24■□□□□ 0.35
TRIM29-211ENST00000529011 SHROOM2Q13796 1616 aa17.19■□□□□ 0.34
TRIM29-211ENST00000529011 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
TRIM29-211ENST00000529011 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
TRIM29-211ENST00000529011 TTBK1Q5TCY1 1321 aaPredicted RBP17.16■□□□□ 0.34
TRIM29-211ENST00000529011 EEA1Q15075 1411 aa17.13■□□□□ 0.33
TRIM29-211ENST00000529011 CARMIL2Q6F5E8 1435 aa17.11■□□□□ 0.33
TRIM29-211ENST00000529011 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRIM29-211ENST00000529011 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
TRIM29-211ENST00000529011 PTPRGP23470 1445 aa17.09■□□□□ 0.33
TRIM29-211ENST00000529011 IQGAP2Q13576 1575 aa17.08■□□□□ 0.32
TRIM29-211ENST00000529011 TNIKQ9UKE5 1360 aa17.07■□□□□ 0.32
TRIM29-211ENST00000529011 EHMT2Q96KQ7 1210 aa17.05■□□□□ 0.32
TRIM29-211ENST00000529011 DISP1Q96F81 1524 aa17.02■□□□□ 0.32
TRIM29-211ENST00000529011 UGGT2Q9NYU1 1516 aa17.01■□□□□ 0.31
TRIM29-211ENST00000529011 RANGAP1P46060 587 aaPredicted RBP17.01■□□□□ 0.31
TRIM29-211ENST00000529011 P3H3Q8IVL6 736 aa17■□□□□ 0.31
TRIM29-211ENST00000529011 UBTFP17480 764 aaKnown RBP16.98■□□□□ 0.31
TRIM29-211ENST00000529011 GOLGA3Q08378 1498 aa16.95■□□□□ 0.3
TRIM29-211ENST00000529011 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
TRIM29-211ENST00000529011 FAM69CQ0P6D2 419 aa16.91■□□□□ 0.3
TRIM29-211ENST00000529011 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
TRIM29-211ENST00000529011 ADCY10Q96PN6 1610 aa16.9■□□□□ 0.3
TRIM29-211ENST00000529011 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
TRIM29-211ENST00000529011 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
TRIM29-211ENST00000529011 KIF21BO75037 1637 aa16.88■□□□□ 0.29
TRIM29-211ENST00000529011 UHRF1BP1LA0JNW5 1464 aa16.87■□□□□ 0.29
TRIM29-211ENST00000529011 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
TRIM29-211ENST00000529011 PLB1Q6P1J6 1458 aa16.86■□□□□ 0.29
TRIM29-211ENST00000529011 MAPKBP1O60336 1514 aa16.82■□□□□ 0.28
TRIM29-211ENST00000529011 ABCC10Q5T3U5 1492 aa16.82■□□□□ 0.28
TRIM29-211ENST00000529011 ARID3CA6NKF2 412 aa16.82■□□□□ 0.28
TRIM29-211ENST00000529011 ASXL2Q76L83 1435 aa16.8■□□□□ 0.28
TRIM29-211ENST00000529011 KDM5BQ9UGL1 1544 aa16.8■□□□□ 0.28
TRIM29-211ENST00000529011 FHOD3Q2V2M9 1422 aa16.78■□□□□ 0.28
TRIM29-211ENST00000529011 SAMD9Q5K651 1589 aa16.77■□□□□ 0.27
TRIM29-211ENST00000529011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.76■□□□□ 0.27
TRIM29-211ENST00000529011 HNRNPUL2Q1KMD3 747 aaKnown RBP16.76■□□□□ 0.27
TRIM29-211ENST00000529011 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
TRIM29-211ENST00000529011 ABCA8O94911 1581 aa16.76■□□□□ 0.27
TRIM29-211ENST00000529011 ATP1B4Q9UN42 357 aaPredicted RBP16.71■□□□□ 0.27
TRIM29-211ENST00000529011 ATP10BO94823 1461 aa16.71■□□□□ 0.27
TRIM29-211ENST00000529011 DIP2BQ9P265 1576 aa16.7■□□□□ 0.26
TRIM29-211ENST00000529011 EFCAB5A4FU69 1503 aa16.7■□□□□ 0.26
TRIM29-211ENST00000529011 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
TRIM29-211ENST00000529011 ZCCHC11Q5TAX3 1644 aaKnown RBP16.68■□□□□ 0.26
TRIM29-211ENST00000529011 EPRSP07814 1512 aaKnown RBP16.67■□□□□ 0.26
TRIM29-211ENST00000529011 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
TRIM29-211ENST00000529011 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
TRIM29-211ENST00000529011 KIF13AQ9H1H9 1805 aa16.66■□□□□ 0.26
TRIM29-211ENST00000529011 PLEKHD1A6NEE1 506 aa16.66■□□□□ 0.26
TRIM29-211ENST00000529011 NUP153P49790 1475 aaKnown RBP16.64■□□□□ 0.25
TRIM29-211ENST00000529011 RAPGEF6Q8TEU7 1601 aa16.63■□□□□ 0.25
TRIM29-211ENST00000529011 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
TRIM29-211ENST00000529011 GLI2P10070 1586 aa16.63■□□□□ 0.25
TRIM29-211ENST00000529011 CLIP1P30622 1438 aa16.6■□□□□ 0.25
TRIM29-211ENST00000529011 CD109Q6YHK3 1445 aa16.59■□□□□ 0.25
TRIM29-211ENST00000529011 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
TRIM29-211ENST00000529011 TSPOAP1O95153 1857 aa16.54■□□□□ 0.24
TRIM29-211ENST00000529011 TEX14Q8IWB6 1497 aa16.51■□□□□ 0.23
TRIM29-211ENST00000529011 MAP3K4Q9Y6R4 1608 aa16.5■□□□□ 0.23
TRIM29-211ENST00000529011 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
TRIM29-211ENST00000529011 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
TRIM29-211ENST00000529011 CASKIN1Q8WXD9 1431 aa16.49■□□□□ 0.23
TRIM29-211ENST00000529011 MAGI3Q5TCQ9 1506 aa16.49■□□□□ 0.23
TRIM29-211ENST00000529011 COL17A1Q9UMD9 1497 aaPredicted RBP16.48■□□□□ 0.23
TRIM29-211ENST00000529011 KDM6BO15054 1643 aa16.46■□□□□ 0.23
TRIM29-211ENST00000529011 PPRC1Q5VV67 1664 aaKnown RBP16.46■□□□□ 0.23
TRIM29-211ENST00000529011 HECW1Q76N89 1606 aa16.45■□□□□ 0.22
TRIM29-211ENST00000529011 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
TRIM29-211ENST00000529011 PHLDB1Q86UU1 1377 aa16.42■□□□□ 0.22
TRIM29-211ENST00000529011 ABCA9Q8IUA7 1624 aa16.41■□□□□ 0.22
TRIM29-211ENST00000529011 RAPGEF3O95398 923 aa16.41■□□□□ 0.22
TRIM29-211ENST00000529011 TROQ12816 1431 aaPredicted RBP16.41■□□□□ 0.22
TRIM29-211ENST00000529011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.4■□□□□ 0.22
TRIM29-211ENST00000529011 CCDC18Q5T9S5 1454 aa16.39■□□□□ 0.21
TRIM29-211ENST00000529011 FYCO1Q9BQS8 1478 aa16.39■□□□□ 0.21
TRIM29-211ENST00000529011 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
TRIM29-211ENST00000529011 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
TRIM29-211ENST00000529011 PLCH2O75038 1416 aa16.36■□□□□ 0.21
TRIM29-211ENST00000529011 NEO1Q92859 1461 aa16.36■□□□□ 0.21
TRIM29-211ENST00000529011 ARAP3Q8WWN8 1544 aa16.35■□□□□ 0.21
TRIM29-211ENST00000529011 AKNAQ7Z591 1439 aa16.35■□□□□ 0.21
TRIM29-211ENST00000529011 FANCAO15360 1455 aa16.34■□□□□ 0.21
TRIM29-211ENST00000529011 TTC37Q6PGP7 1564 aa16.31■□□□□ 0.2
TRIM29-211ENST00000529011 MTUS2Q5JR59 1369 aa16.31■□□□□ 0.2
TRIM29-211ENST00000529011 LRRIQ1Q96JM4 1722 aa16.31■□□□□ 0.2
TRIM29-211ENST00000529011 KDM4FA0A1W2PPD8 638 aa16.29■□□□□ 0.2
TRIM29-211ENST00000529011 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
TRIM29-211ENST00000529011 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
TRIM29-211ENST00000529011 SCAPERQ9BY12 1400 aa16.28■□□□□ 0.2
TRIM29-211ENST00000529011 KIF14Q15058 1648 aa16.28■□□□□ 0.2
TRIM29-211ENST00000529011 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms