RNA–Protein interactions for RNA: ENST00000528730.1

PDZD3-209, Transcript of PDZ domain containing 3, humanhuman

TSL 3

Gene PDZD3, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-209ENST00000528730 PRG4Q92954 1404 aaPredicted RBP22.03■■□□□ 1.12
PDZD3-209ENST00000528730 JPH4Q96JJ6 628 aa22.02■■□□□ 1.12
PDZD3-209ENST00000528730 KIAA0586Q9BVV6 1533 aa22■■□□□ 1.11
PDZD3-209ENST00000528730 RAPGEF2Q9Y4G8 1499 aa21.97■■□□□ 1.11
PDZD3-209ENST00000528730 TRHP20396 242 aaPredicted RBP21.94■■□□□ 1.1
PDZD3-209ENST00000528730 IQGAP2Q13576 1575 aa21.91■■□□□ 1.1
PDZD3-209ENST00000528730 TTBK1Q5TCY1 1321 aaPredicted RBP21.89■■□□□ 1.1
PDZD3-209ENST00000528730 FAM9AQ8IZU1 332 aaPredicted RBP21.87■■□□□ 1.09
PDZD3-209ENST00000528730 CTTNBP2Q8WZ74 1663 aa21.85■■□□□ 1.09
PDZD3-209ENST00000528730 CARMIL2Q6F5E8 1435 aa21.84■■□□□ 1.09
PDZD3-209ENST00000528730 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
PDZD3-209ENST00000528730 CSRNP3Q8WYN3 585 aa21.82■■□□□ 1.08
PDZD3-209ENST00000528730 EEA1Q15075 1411 aa21.8■■□□□ 1.08
PDZD3-209ENST00000528730 PRXQ9BXM0 1461 aa21.8■■□□□ 1.08
PDZD3-209ENST00000528730 NPM1P06748 294 aaKnown RBP eCLIP21.76■■□□□ 1.07
PDZD3-209ENST00000528730 PTPRGP23470 1445 aa21.75■■□□□ 1.07
PDZD3-209ENST00000528730 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
PDZD3-209ENST00000528730 UGGT2Q9NYU1 1516 aa21.72■■□□□ 1.07
PDZD3-209ENST00000528730 KIAA0556O60303 1618 aa21.69■■□□□ 1.06
PDZD3-209ENST00000528730 ADCY10Q96PN6 1610 aa21.69■■□□□ 1.06
PDZD3-209ENST00000528730 DISP1Q96F81 1524 aa21.69■■□□□ 1.06
PDZD3-209ENST00000528730 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
PDZD3-209ENST00000528730 GOLGA3Q08378 1498 aa21.65■■□□□ 1.06
PDZD3-209ENST00000528730 RANGAP1P46060 587 aaPredicted RBP21.63■■□□□ 1.05
PDZD3-209ENST00000528730 KIF21BO75037 1637 aa21.61■■□□□ 1.05
PDZD3-209ENST00000528730 UACAQ9BZF9 1416 aa21.58■■□□□ 1.05
PDZD3-209ENST00000528730 P3H3Q8IVL6 736 aa21.58■■□□□ 1.05
PDZD3-209ENST00000528730 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
PDZD3-209ENST00000528730 ABCC2Q92887 1545 aa21.55■■□□□ 1.04
PDZD3-209ENST00000528730 UBTFP17480 764 aaKnown RBP21.54■■□□□ 1.04
PDZD3-209ENST00000528730 KIF13AQ9H1H9 1805 aa21.54■■□□□ 1.04
PDZD3-209ENST00000528730 UHRF1BP1LA0JNW5 1464 aa21.52■■□□□ 1.03
PDZD3-209ENST00000528730 FAM69CQ0P6D2 419 aa21.51■■□□□ 1.03
PDZD3-209ENST00000528730 PLB1Q6P1J6 1458 aa21.49■■□□□ 1.03
PDZD3-209ENST00000528730 ABCC10Q5T3U5 1492 aa21.47■■□□□ 1.03
PDZD3-209ENST00000528730 SAMD9Q5K651 1589 aa21.47■■□□□ 1.03
PDZD3-209ENST00000528730 DIP2BQ9P265 1576 aa21.47■■□□□ 1.03
PDZD3-209ENST00000528730 ZCCHC11Q5TAX3 1644 aaKnown RBP21.47■■□□□ 1.03
PDZD3-209ENST00000528730 ASXL2Q76L83 1435 aa21.44■■□□□ 1.02
PDZD3-209ENST00000528730 TSPOAP1O95153 1857 aa21.43■■□□□ 1.02
PDZD3-209ENST00000528730 ARID3CA6NKF2 412 aa21.42■■□□□ 1.02
PDZD3-209ENST00000528730 ABCA8O94911 1581 aa21.42■■□□□ 1.02
PDZD3-209ENST00000528730 KDM5BQ9UGL1 1544 aa21.42■■□□□ 1.02
PDZD3-209ENST00000528730 FHOD3Q2V2M9 1422 aa21.39■■□□□ 1.02
PDZD3-209ENST00000528730 EFCAB5A4FU69 1503 aa21.38■■□□□ 1.01
PDZD3-209ENST00000528730 RAPGEF6Q8TEU7 1601 aa21.36■■□□□ 1.01
PDZD3-209ENST00000528730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
PDZD3-209ENST00000528730 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
PDZD3-209ENST00000528730 WDR7Q9Y4E6 1490 aa21.32■■□□□ 1
PDZD3-209ENST00000528730 KCNH8Q96L42 1107 aa21.29■■□□□ 1
PDZD3-209ENST00000528730 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
PDZD3-209ENST00000528730 GLI2P10070 1586 aa21.27■■□□□ 1
PDZD3-209ENST00000528730 ATP1B4Q9UN42 357 aaPredicted RBP21.27■■□□□ 1
PDZD3-209ENST00000528730 ATP10BO94823 1461 aa21.25■□□□□ 0.99
PDZD3-209ENST00000528730 KDM6BO15054 1643 aa21.23■□□□□ 0.99
PDZD3-209ENST00000528730 ARHGAP35Q9NRY4 1499 aa21.23■□□□□ 0.99
PDZD3-209ENST00000528730 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
PDZD3-209ENST00000528730 NUP153P49790 1475 aaKnown RBP21.21■□□□□ 0.99
PDZD3-209ENST00000528730 FMN1Q68DA7 1419 aa21.2■□□□□ 0.98
PDZD3-209ENST00000528730 PPRC1Q5VV67 1664 aaKnown RBP21.18■□□□□ 0.98
PDZD3-209ENST00000528730 CFAP43Q8NDM7 1665 aa21.18■□□□□ 0.98
PDZD3-209ENST00000528730 TEX14Q8IWB6 1497 aa21.17■□□□□ 0.98
PDZD3-209ENST00000528730 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
PDZD3-209ENST00000528730 CD109Q6YHK3 1445 aa21.14■□□□□ 0.98
PDZD3-209ENST00000528730 PLEKHD1A6NEE1 506 aa21.12■□□□□ 0.97
PDZD3-209ENST00000528730 CDK13Q14004 1512 aaKnown RBP21.12■□□□□ 0.97
PDZD3-209ENST00000528730 CLIP1P30622 1438 aa21.12■□□□□ 0.97
PDZD3-209ENST00000528730 ABCA9Q8IUA7 1624 aa21.06■□□□□ 0.96
PDZD3-209ENST00000528730 PCF11O94913 1555 aaKnown RBP21.05■□□□□ 0.96
PDZD3-209ENST00000528730 MAGI3Q5TCQ9 1506 aa21.04■□□□□ 0.96
PDZD3-209ENST00000528730 CDK11AQ9UQ88 783 aaPredicted RBP21.03■□□□□ 0.96
PDZD3-209ENST00000528730 LRRIQ1Q96JM4 1722 aa20.99■□□□□ 0.95
PDZD3-209ENST00000528730 CEP162Q5TB80 1403 aa20.98■□□□□ 0.95
PDZD3-209ENST00000528730 CASKIN1Q8WXD9 1431 aa20.98■□□□□ 0.95
PDZD3-209ENST00000528730 LOC105371045A0A1W2PR82 267 aa20.98■□□□□ 0.95
PDZD3-209ENST00000528730 CCDC18Q5T9S5 1454 aa20.96■□□□□ 0.95
PDZD3-209ENST00000528730 AEBP2Q6ZN18 517 aaPredicted RBP20.96■□□□□ 0.95
PDZD3-209ENST00000528730 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
PDZD3-209ENST00000528730 COL17A1Q9UMD9 1497 aaPredicted RBP20.95■□□□□ 0.94
PDZD3-209ENST00000528730 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.95■□□□□ 0.94
PDZD3-209ENST00000528730 TTC37Q6PGP7 1564 aa20.95■□□□□ 0.94
PDZD3-209ENST00000528730 KIF14Q15058 1648 aa20.94■□□□□ 0.94
PDZD3-209ENST00000528730 CFAP74Q9C0B2 1584 aa20.9■□□□□ 0.94
PDZD3-209ENST00000528730 TROQ12816 1431 aaPredicted RBP20.9■□□□□ 0.94
PDZD3-209ENST00000528730 NEO1Q92859 1461 aa20.89■□□□□ 0.94
PDZD3-209ENST00000528730 MYO5CQ9NQX4 1742 aa20.89■□□□□ 0.93
PDZD3-209ENST00000528730 FANCAO15360 1455 aa20.88■□□□□ 0.93
PDZD3-209ENST00000528730 PHLDB1Q86UU1 1377 aa20.87■□□□□ 0.93
PDZD3-209ENST00000528730 ARAP3Q8WWN8 1544 aa20.86■□□□□ 0.93
PDZD3-209ENST00000528730 RAPGEF3O95398 923 aa20.83■□□□□ 0.93
PDZD3-209ENST00000528730 AKNAQ7Z591 1439 aa20.82■□□□□ 0.92
PDZD3-209ENST00000528730 ARHGAP5Q13017 1502 aa20.81■□□□□ 0.92
PDZD3-209ENST00000528730 PLCH2O75038 1416 aa20.8■□□□□ 0.92
PDZD3-209ENST00000528730 DENND4BO75064 1496 aaPredicted RBP20.79■□□□□ 0.92
PDZD3-209ENST00000528730 MTUS2Q5JR59 1369 aa20.78■□□□□ 0.92
PDZD3-209ENST00000528730 EFCAB2Q5VUJ9 269 aa20.78■□□□□ 0.92
PDZD3-209ENST00000528730 ADGRL1O94910 1474 aa20.77■□□□□ 0.92
PDZD3-209ENST00000528730 FRMPD1Q5SYB0 1578 aa20.75■□□□□ 0.91
PDZD3-209ENST00000528730 RICTORQ6R327 1708 aa20.74■□□□□ 0.91
PDZD3-209ENST00000528730 SCAPERQ9BY12 1400 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms