RNA–Protein interactions for RNA: ENST00000528534.1

CHID1-214, Transcript of chitinase domain containing 1, humanhuman

TSL 3

Gene CHID1, Length 321 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-214ENST00000528534 SHROOM2Q13796 1616 aa22.47■■□□□ 1.19
CHID1-214ENST00000528534 PRG4Q92954 1404 aaPredicted RBP22.47■■□□□ 1.19
CHID1-214ENST00000528534 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
CHID1-214ENST00000528534 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.18
CHID1-214ENST00000528534 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
CHID1-214ENST00000528534 CSRNP3Q8WYN3 585 aa22.34■■□□□ 1.17
CHID1-214ENST00000528534 PRXQ9BXM0 1461 aa22.32■■□□□ 1.16
CHID1-214ENST00000528534 EEA1Q15075 1411 aa22.31■■□□□ 1.16
CHID1-214ENST00000528534 IQGAP2Q13576 1575 aa22.31■■□□□ 1.16
CHID1-214ENST00000528534 FAM9AQ8IZU1 332 aaPredicted RBP22.29■■□□□ 1.16
CHID1-214ENST00000528534 TRHP20396 242 aaPredicted RBP22.28■■□□□ 1.16
CHID1-214ENST00000528534 CARMIL2Q6F5E8 1435 aa22.27■■□□□ 1.16
CHID1-214ENST00000528534 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
CHID1-214ENST00000528534 TNIKQ9UKE5 1360 aa22.2■■□□□ 1.14
CHID1-214ENST00000528534 PTPRGP23470 1445 aa22.2■■□□□ 1.14
CHID1-214ENST00000528534 UGGT2Q9NYU1 1516 aa22.18■■□□□ 1.14
CHID1-214ENST00000528534 NPM1P06748 294 aaKnown RBP eCLIP22.16■■□□□ 1.14
CHID1-214ENST00000528534 DISP1Q96F81 1524 aa22.16■■□□□ 1.14
CHID1-214ENST00000528534 CTTNBP2Q8WZ74 1663 aa22.15■■□□□ 1.14
CHID1-214ENST00000528534 GOLGA3Q08378 1498 aa22.09■■□□□ 1.13
CHID1-214ENST00000528534 KIAA0556O60303 1618 aa22.09■■□□□ 1.13
CHID1-214ENST00000528534 ADCY10Q96PN6 1610 aa22.06■■□□□ 1.12
CHID1-214ENST00000528534 KIF21BO75037 1637 aa22.04■■□□□ 1.12
CHID1-214ENST00000528534 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
CHID1-214ENST00000528534 UACAQ9BZF9 1416 aa22.03■■□□□ 1.12
CHID1-214ENST00000528534 RANGAP1P46060 587 aaPredicted RBP22■■□□□ 1.11
CHID1-214ENST00000528534 P3H3Q8IVL6 736 aa22■■□□□ 1.11
CHID1-214ENST00000528534 UHRF1BP1LA0JNW5 1464 aa21.98■■□□□ 1.11
CHID1-214ENST00000528534 ABCC2Q92887 1545 aa21.98■■□□□ 1.11
CHID1-214ENST00000528534 UBTFP17480 764 aaKnown RBP21.98■■□□□ 1.11
CHID1-214ENST00000528534 MAPKBP1O60336 1514 aa21.96■■□□□ 1.11
CHID1-214ENST00000528534 FAM69CQ0P6D2 419 aa21.93■■□□□ 1.1
CHID1-214ENST00000528534 PLB1Q6P1J6 1458 aa21.91■■□□□ 1.1
CHID1-214ENST00000528534 ABCC10Q5T3U5 1492 aa21.9■■□□□ 1.1
CHID1-214ENST00000528534 SAMD9Q5K651 1589 aa21.89■■□□□ 1.09
CHID1-214ENST00000528534 KDM5BQ9UGL1 1544 aa21.88■■□□□ 1.09
CHID1-214ENST00000528534 ASXL2Q76L83 1435 aa21.86■■□□□ 1.09
CHID1-214ENST00000528534 ABCA8O94911 1581 aa21.85■■□□□ 1.09
CHID1-214ENST00000528534 FHOD3Q2V2M9 1422 aa21.83■■□□□ 1.09
CHID1-214ENST00000528534 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
CHID1-214ENST00000528534 KIF13AQ9H1H9 1805 aa21.82■■□□□ 1.08
CHID1-214ENST00000528534 EFCAB5A4FU69 1503 aa21.8■■□□□ 1.08
CHID1-214ENST00000528534 ZCCHC11Q5TAX3 1644 aaKnown RBP21.8■■□□□ 1.08
CHID1-214ENST00000528534 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
CHID1-214ENST00000528534 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
CHID1-214ENST00000528534 WDR7Q9Y4E6 1490 aa21.72■■□□□ 1.07
CHID1-214ENST00000528534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
CHID1-214ENST00000528534 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
CHID1-214ENST00000528534 EPRSP07814 1512 aaKnown RBP21.71■■□□□ 1.07
CHID1-214ENST00000528534 ATP10BO94823 1461 aa21.71■■□□□ 1.07
CHID1-214ENST00000528534 KCNH8Q96L42 1107 aa21.7■■□□□ 1.06
CHID1-214ENST00000528534 ARHGAP35Q9NRY4 1499 aa21.7■■□□□ 1.06
CHID1-214ENST00000528534 GLI2P10070 1586 aa21.7■■□□□ 1.06
CHID1-214ENST00000528534 NUP153P49790 1475 aaKnown RBP21.65■■□□□ 1.06
CHID1-214ENST00000528534 FMN1Q68DA7 1419 aa21.65■■□□□ 1.06
CHID1-214ENST00000528534 TSPOAP1O95153 1857 aa21.64■■□□□ 1.05
CHID1-214ENST00000528534 ATP1B4Q9UN42 357 aaPredicted RBP21.63■■□□□ 1.05
CHID1-214ENST00000528534 CLIP1P30622 1438 aa21.58■■□□□ 1.05
CHID1-214ENST00000528534 PLEKHD1A6NEE1 506 aa21.58■■□□□ 1.05
CHID1-214ENST00000528534 MAP3K4Q9Y6R4 1608 aa21.57■■□□□ 1.04
CHID1-214ENST00000528534 CD109Q6YHK3 1445 aa21.56■■□□□ 1.04
CHID1-214ENST00000528534 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
CHID1-214ENST00000528534 KDM6BO15054 1643 aa21.53■■□□□ 1.04
CHID1-214ENST00000528534 HECW1Q76N89 1606 aa21.52■■□□□ 1.04
CHID1-214ENST00000528534 PPRC1Q5VV67 1664 aaKnown RBP21.52■■□□□ 1.04
CHID1-214ENST00000528534 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
CHID1-214ENST00000528534 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
CHID1-214ENST00000528534 LOC105371045A0A1W2PR82 267 aa21.49■■□□□ 1.03
CHID1-214ENST00000528534 MAGI3Q5TCQ9 1506 aa21.49■■□□□ 1.03
CHID1-214ENST00000528534 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
CHID1-214ENST00000528534 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
CHID1-214ENST00000528534 CEP162Q5TB80 1403 aa21.44■■□□□ 1.02
CHID1-214ENST00000528534 ABCA9Q8IUA7 1624 aa21.44■■□□□ 1.02
CHID1-214ENST00000528534 PCF11O94913 1555 aaKnown RBP21.41■■□□□ 1.02
CHID1-214ENST00000528534 COL17A1Q9UMD9 1497 aaPredicted RBP21.39■■□□□ 1.02
CHID1-214ENST00000528534 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.01
CHID1-214ENST00000528534 FYCO1Q9BQS8 1478 aa21.39■■□□□ 1.01
CHID1-214ENST00000528534 PHLDB1Q86UU1 1377 aa21.36■■□□□ 1.01
CHID1-214ENST00000528534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHID1-214ENST00000528534 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
CHID1-214ENST00000528534 NEO1Q92859 1461 aa21.32■■□□□ 1
CHID1-214ENST00000528534 TTC37Q6PGP7 1564 aa21.31■■□□□ 1
CHID1-214ENST00000528534 LRRIQ1Q96JM4 1722 aa21.31■■□□□ 1
CHID1-214ENST00000528534 ARAP3Q8WWN8 1544 aa21.29■■□□□ 1
CHID1-214ENST00000528534 KIF14Q15058 1648 aa21.29■■□□□ 1
CHID1-214ENST00000528534 FANCAO15360 1455 aa21.27■■□□□ 1
CHID1-214ENST00000528534 PLCH2O75038 1416 aa21.26■□□□□ 0.99
CHID1-214ENST00000528534 RAPGEF3O95398 923 aa21.25■□□□□ 0.99
CHID1-214ENST00000528534 AKNAQ7Z591 1439 aa21.25■□□□□ 0.99
CHID1-214ENST00000528534 EFCAB2Q5VUJ9 269 aa21.24■□□□□ 0.99
CHID1-214ENST00000528534 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
CHID1-214ENST00000528534 CFAP74Q9C0B2 1584 aa21.23■□□□□ 0.99
CHID1-214ENST00000528534 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
CHID1-214ENST00000528534 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
CHID1-214ENST00000528534 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
CHID1-214ENST00000528534 MYO5CQ9NQX4 1742 aa21.18■□□□□ 0.98
CHID1-214ENST00000528534 ARHGAP5Q13017 1502 aa21.17■□□□□ 0.98
CHID1-214ENST00000528534 ADGRL1O94910 1474 aa21.16■□□□□ 0.98
CHID1-214ENST00000528534 SCAPERQ9BY12 1400 aa21.15■□□□□ 0.98
CHID1-214ENST00000528534 FRMPD1Q5SYB0 1578 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms