RNA–Protein interactions for RNA: ENST00000528450.5

SLC43A1-204, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-204ENST00000528450 CUL7Q14999 1698 aa24.23■■□□□ 1.47
SLC43A1-204ENST00000528450 NEUROD1Q13562 356 aa24.21■■□□□ 1.47
SLC43A1-204ENST00000528450 TARBP1Q13395 1621 aaKnown RBP24.19■■□□□ 1.46
SLC43A1-204ENST00000528450 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
SLC43A1-204ENST00000528450 ATP1B4Q9UN42 357 aaPredicted RBP24.15■■□□□ 1.46
SLC43A1-204ENST00000528450 FHOD3Q2V2M9 1422 aa24.14■■□□□ 1.45
SLC43A1-204ENST00000528450 AQRO60306 1485 aaKnown RBP eCLIP24.14■■□□□ 1.454e-7■■■■□ 21.6
SLC43A1-204ENST00000528450 CTTNBP2Q8WZ74 1663 aa24.12■■□□□ 1.45
SLC43A1-204ENST00000528450 CENPBP07199 599 aaPredicted RBP24.1■■□□□ 1.45
SLC43A1-204ENST00000528450 GTF3C3Q9Y5Q9 886 aa24.05■■□□□ 1.44
SLC43A1-204ENST00000528450 PCF11O94913 1555 aaKnown RBP24.04■■□□□ 1.44
SLC43A1-204ENST00000528450 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
SLC43A1-204ENST00000528450 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
SLC43A1-204ENST00000528450 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
SLC43A1-204ENST00000528450 TIAM1Q13009 1591 aa24.02■■□□□ 1.44
SLC43A1-204ENST00000528450 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
SLC43A1-204ENST00000528450 DIEXFQ68CQ4 756 aaKnown RBP23.99■■□□□ 1.43
SLC43A1-204ENST00000528450 WDR62O43379 1518 aa23.99■■□□□ 1.43
SLC43A1-204ENST00000528450 ITGAEP38570 1179 aa23.98■■□□□ 1.43
SLC43A1-204ENST00000528450 EFCAB5A4FU69 1503 aa23.97■■□□□ 1.43
SLC43A1-204ENST00000528450 LRRC9Q6ZRR7 1453 aa23.94■■□□□ 1.42
SLC43A1-204ENST00000528450 RRBP1Q9P2E9 1410 aaKnown RBP23.94■■□□□ 1.42
SLC43A1-204ENST00000528450 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
SLC43A1-204ENST00000528450 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
SLC43A1-204ENST00000528450 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
SLC43A1-204ENST00000528450 ADAMTS12P58397 1594 aa23.9■■□□□ 1.42
SLC43A1-204ENST00000528450 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
SLC43A1-204ENST00000528450 CFAP43Q8NDM7 1665 aa23.88■■□□□ 1.41
SLC43A1-204ENST00000528450 CASKIN1Q8WXD9 1431 aa23.87■■□□□ 1.41
SLC43A1-204ENST00000528450 SAMD9Q5K651 1589 aa23.87■■□□□ 1.41
SLC43A1-204ENST00000528450 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
SLC43A1-204ENST00000528450 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
SLC43A1-204ENST00000528450 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
SLC43A1-204ENST00000528450 FMN1Q68DA7 1419 aa23.84■■□□□ 1.41
SLC43A1-204ENST00000528450 EIF4G3O43432 1585 aaKnown RBP23.82■■□□□ 1.4
SLC43A1-204ENST00000528450 SNAPC4Q5SXM2 1469 aa23.82■■□□□ 1.4
SLC43A1-204ENST00000528450 FAM50AQ14320 339 aaKnown RBP23.79■■□□□ 1.4
SLC43A1-204ENST00000528450 LRRIQ1Q96JM4 1722 aa23.77■■□□□ 1.4
SLC43A1-204ENST00000528450 IQGAP2Q13576 1575 aa23.77■■□□□ 1.4
SLC43A1-204ENST00000528450 ARID3CA6NKF2 412 aa23.73■■□□□ 1.39
SLC43A1-204ENST00000528450 FBLN2P98095 1184 aa23.73■■□□□ 1.39
SLC43A1-204ENST00000528450 DHX57Q6P158 1386 aaKnown RBP23.71■■□□□ 1.39
SLC43A1-204ENST00000528450 MTUS2Q5JR59 1369 aa23.7■■□□□ 1.38
SLC43A1-204ENST00000528450 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
SLC43A1-204ENST00000528450 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
SLC43A1-204ENST00000528450 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.37
SLC43A1-204ENST00000528450 RAB3GAP2Q9H2M9 1393 aa23.61■■□□□ 1.37
SLC43A1-204ENST00000528450 KIAA0586Q9BVV6 1533 aa23.6■■□□□ 1.37
SLC43A1-204ENST00000528450 UGGT2Q9NYU1 1516 aa23.6■■□□□ 1.37
SLC43A1-204ENST00000528450 MAGI3Q5TCQ9 1506 aa23.58■■□□□ 1.37
SLC43A1-204ENST00000528450 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
SLC43A1-204ENST00000528450 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
SLC43A1-204ENST00000528450 CDK13Q14004 1512 aaKnown RBP23.56■■□□□ 1.36
SLC43A1-204ENST00000528450 DISP1Q96F81 1524 aa23.56■■□□□ 1.36
SLC43A1-204ENST00000528450 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
SLC43A1-204ENST00000528450 FGD6Q6ZV73 1430 aa23.55■■□□□ 1.36
SLC43A1-204ENST00000528450 CEP170Q5SW79 1584 aa23.55■■□□□ 1.36
SLC43A1-204ENST00000528450 KIAA0556O60303 1618 aa23.53■■□□□ 1.36
SLC43A1-204ENST00000528450 HECW1Q76N89 1606 aa23.53■■□□□ 1.36
SLC43A1-204ENST00000528450 SETD5Q9C0A6 1442 aa23.53■■□□□ 1.36
SLC43A1-204ENST00000528450 EPRSP07814 1512 aaKnown RBP23.52■■□□□ 1.36
SLC43A1-204ENST00000528450 SUPT6HQ7KZ85 1726 aaKnown RBP23.5■■□□□ 1.35
SLC43A1-204ENST00000528450 EHBP1L1Q8N3D4 1523 aa23.5■■□□□ 1.35
SLC43A1-204ENST00000528450 CCDC18Q5T9S5 1454 aa23.49■■□□□ 1.35
SLC43A1-204ENST00000528450 MYOM3Q5VTT5 1437 aa23.46■■□□□ 1.35
SLC43A1-204ENST00000528450 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
SLC43A1-204ENST00000528450 PTPRKQ15262 1439 aa23.44■■□□□ 1.34
SLC43A1-204ENST00000528450 JPH4Q96JJ6 628 aa23.43■■□□□ 1.34
SLC43A1-204ENST00000528450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.42■■□□□ 1.34
SLC43A1-204ENST00000528450 NUP160Q12769 1436 aa23.4■■□□□ 1.34
SLC43A1-204ENST00000528450 MAPKBP1O60336 1514 aa23.39■■□□□ 1.34
SLC43A1-204ENST00000528450 NUP153P49790 1475 aaKnown RBP23.39■■□□□ 1.34
SLC43A1-204ENST00000528450 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
SLC43A1-204ENST00000528450 RAPGEF6Q8TEU7 1601 aa23.38■■□□□ 1.33
SLC43A1-204ENST00000528450 PTPN23Q9H3S7 1636 aa23.38■■□□□ 1.33
SLC43A1-204ENST00000528450 PLB1Q6P1J6 1458 aa23.37■■□□□ 1.33
SLC43A1-204ENST00000528450 YTHDC1Q96MU7 727 aaKnown RBP23.37■■□□□ 1.33
SLC43A1-204ENST00000528450 MIER1Q8N108 512 aa23.35■■□□□ 1.33
SLC43A1-204ENST00000528450 CHIC2Q9UKJ5 165 aa23.35■■□□□ 1.33
SLC43A1-204ENST00000528450 SIN3AQ96ST3 1273 aa23.33■■□□□ 1.33
SLC43A1-204ENST00000528450 CARMIL2Q6F5E8 1435 aa23.3■■□□□ 1.32
SLC43A1-204ENST00000528450 RRP7BPQ9NSQ0 103 aa23.29■■□□□ 1.32
SLC43A1-204ENST00000528450 PRG4Q92954 1404 aaPredicted RBP23.27■■□□□ 1.32
SLC43A1-204ENST00000528450 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
SLC43A1-204ENST00000528450 CHD1O14646 1710 aa23.24■■□□□ 1.31
SLC43A1-204ENST00000528450 ZNF644Q9H582 1327 aaPredicted RBP23.24■■□□□ 1.31
SLC43A1-204ENST00000528450 NAIPQ13075 1403 aa23.23■■□□□ 1.31
SLC43A1-204ENST00000528450 TCOF1Q13428 1488 aaKnown RBP23.23■■□□□ 1.31
SLC43A1-204ENST00000528450 CDK11AQ9UQ88 783 aaPredicted RBP23.22■■□□□ 1.31
SLC43A1-204ENST00000528450 MIA2Q96PC5 1412 aa23.18■■□□□ 1.3
SLC43A1-204ENST00000528450 TROQ12816 1431 aaPredicted RBP23.16■■□□□ 1.3
SLC43A1-204ENST00000528450 KIF14Q15058 1648 aa23.15■■□□□ 1.3
SLC43A1-204ENST00000528450 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
SLC43A1-204ENST00000528450 KDM6BO15054 1643 aa23.12■■□□□ 1.29
SLC43A1-204ENST00000528450 ABCA8O94911 1581 aa23.12■■□□□ 1.29
SLC43A1-204ENST00000528450 UACAQ9BZF9 1416 aa23.12■■□□□ 1.29
SLC43A1-204ENST00000528450 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
SLC43A1-204ENST00000528450 PTPRGP23470 1445 aa23.1■■□□□ 1.29
SLC43A1-204ENST00000528450 ATP10BO94823 1461 aa23.1■■□□□ 1.29
SLC43A1-204ENST00000528450 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms