RNA–Protein interactions for RNA: ENST00000528298.5

MS4A3-206, Transcript of membrane spanning 4-domains A3, humanhuman

TSL 3

Gene MS4A3, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3-206ENST00000528298 SHROOM2Q13796 1616 aa19.78■□□□□ 0.76
MS4A3-206ENST00000528298 KIAA0586Q9BVV6 1533 aa19.76■□□□□ 0.75
MS4A3-206ENST00000528298 PRG4Q92954 1404 aaPredicted RBP19.73■□□□□ 0.75
MS4A3-206ENST00000528298 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
MS4A3-206ENST00000528298 ERCC6L2Q5T890 1561 aa19.69■□□□□ 0.74
MS4A3-206ENST00000528298 RAPGEF2Q9Y4G8 1499 aa19.68■□□□□ 0.74
MS4A3-206ENST00000528298 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
MS4A3-206ENST00000528298 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
MS4A3-206ENST00000528298 CARMIL2Q6F5E8 1435 aa19.58■□□□□ 0.72
MS4A3-206ENST00000528298 EEA1Q15075 1411 aa19.57■□□□□ 0.72
MS4A3-206ENST00000528298 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
MS4A3-206ENST00000528298 IQGAP2Q13576 1575 aa19.56■□□□□ 0.72
MS4A3-206ENST00000528298 NPM1P06748 294 aaKnown RBP eCLIP19.52■□□□□ 0.72
MS4A3-206ENST00000528298 PTPRGP23470 1445 aa19.51■□□□□ 0.71
MS4A3-206ENST00000528298 TNIKQ9UKE5 1360 aa19.51■□□□□ 0.71
MS4A3-206ENST00000528298 UGGT2Q9NYU1 1516 aa19.48■□□□□ 0.71
MS4A3-206ENST00000528298 DISP1Q96F81 1524 aa19.44■□□□□ 0.7
MS4A3-206ENST00000528298 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
MS4A3-206ENST00000528298 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
MS4A3-206ENST00000528298 FAM9AQ8IZU1 332 aaPredicted RBP19.4■□□□□ 0.7
MS4A3-206ENST00000528298 TTBK1Q5TCY1 1321 aaPredicted RBP19.4■□□□□ 0.7
MS4A3-206ENST00000528298 ADCY10Q96PN6 1610 aa19.37■□□□□ 0.69
MS4A3-206ENST00000528298 UACAQ9BZF9 1416 aa19.35■□□□□ 0.69
MS4A3-206ENST00000528298 KIAA0556O60303 1618 aa19.35■□□□□ 0.69
MS4A3-206ENST00000528298 UHRF1BP1LA0JNW5 1464 aa19.35■□□□□ 0.69
MS4A3-206ENST00000528298 MAPKBP1O60336 1514 aa19.34■□□□□ 0.69
MS4A3-206ENST00000528298 ABCC2Q92887 1545 aa19.31■□□□□ 0.68
MS4A3-206ENST00000528298 FAM69CQ0P6D2 419 aa19.29■□□□□ 0.68
MS4A3-206ENST00000528298 KIF21BO75037 1637 aa19.29■□□□□ 0.68
MS4A3-206ENST00000528298 ABCC10Q5T3U5 1492 aa19.28■□□□□ 0.68
MS4A3-206ENST00000528298 PLB1Q6P1J6 1458 aa19.24■□□□□ 0.67
MS4A3-206ENST00000528298 KIF13AQ9H1H9 1805 aa19.24■□□□□ 0.67
MS4A3-206ENST00000528298 KDM5BQ9UGL1 1544 aa19.24■□□□□ 0.67
MS4A3-206ENST00000528298 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
MS4A3-206ENST00000528298 P3H3Q8IVL6 736 aa19.23■□□□□ 0.67
MS4A3-206ENST00000528298 ASXL2Q76L83 1435 aa19.2■□□□□ 0.66
MS4A3-206ENST00000528298 SAMD9Q5K651 1589 aa19.19■□□□□ 0.66
MS4A3-206ENST00000528298 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
MS4A3-206ENST00000528298 ABCA8O94911 1581 aa19.18■□□□□ 0.66
MS4A3-206ENST00000528298 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
MS4A3-206ENST00000528298 ZCCHC11Q5TAX3 1644 aaKnown RBP19.14■□□□□ 0.65
MS4A3-206ENST00000528298 GLI2P10070 1586 aa19.12■□□□□ 0.65
MS4A3-206ENST00000528298 EFCAB5A4FU69 1503 aa19.11■□□□□ 0.65
MS4A3-206ENST00000528298 EHMT2Q96KQ7 1210 aa19.11■□□□□ 0.65
MS4A3-206ENST00000528298 EPRSP07814 1512 aaKnown RBP19.08■□□□□ 0.64
MS4A3-206ENST00000528298 WDR7Q9Y4E6 1490 aa19.08■□□□□ 0.64
MS4A3-206ENST00000528298 FHOD3Q2V2M9 1422 aa19.07■□□□□ 0.64
MS4A3-206ENST00000528298 ATP10BO94823 1461 aa19.06■□□□□ 0.64
MS4A3-206ENST00000528298 RAPGEF6Q8TEU7 1601 aa19.04■□□□□ 0.64
MS4A3-206ENST00000528298 TSPOAP1O95153 1857 aa19.04■□□□□ 0.64
MS4A3-206ENST00000528298 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
MS4A3-206ENST00000528298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
MS4A3-206ENST00000528298 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
MS4A3-206ENST00000528298 ARID3CA6NKF2 412 aa18.99■□□□□ 0.63
MS4A3-206ENST00000528298 FMN1Q68DA7 1419 aa18.99■□□□□ 0.63
MS4A3-206ENST00000528298 PLEKHD1A6NEE1 506 aa18.98■□□□□ 0.63
MS4A3-206ENST00000528298 MAP3K4Q9Y6R4 1608 aa18.98■□□□□ 0.63
MS4A3-206ENST00000528298 NUP153P49790 1475 aaKnown RBP18.97■□□□□ 0.63
MS4A3-206ENST00000528298 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
MS4A3-206ENST00000528298 ARHGAP35Q9NRY4 1499 aa18.97■□□□□ 0.63
MS4A3-206ENST00000528298 CD109Q6YHK3 1445 aa18.96■□□□□ 0.63
MS4A3-206ENST00000528298 KDM6BO15054 1643 aa18.93■□□□□ 0.62
MS4A3-206ENST00000528298 PPRC1Q5VV67 1664 aaKnown RBP18.93■□□□□ 0.62
MS4A3-206ENST00000528298 CFAP43Q8NDM7 1665 aa18.93■□□□□ 0.62
MS4A3-206ENST00000528298 MAGI3Q5TCQ9 1506 aa18.92■□□□□ 0.62
MS4A3-206ENST00000528298 ATP1B4Q9UN42 357 aaPredicted RBP18.9■□□□□ 0.62
MS4A3-206ENST00000528298 CDK11AQ9UQ88 783 aaPredicted RBP18.89■□□□□ 0.61
MS4A3-206ENST00000528298 PHLDB1Q86UU1 1377 aa18.86■□□□□ 0.61
MS4A3-206ENST00000528298 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
MS4A3-206ENST00000528298 CLIP1P30622 1438 aa18.84■□□□□ 0.61
MS4A3-206ENST00000528298 HECW1Q76N89 1606 aa18.83■□□□□ 0.61
MS4A3-206ENST00000528298 COL17A1Q9UMD9 1497 aaPredicted RBP18.82■□□□□ 0.6
MS4A3-206ENST00000528298 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
MS4A3-206ENST00000528298 CDK13Q14004 1512 aaKnown RBP18.79■□□□□ 0.6
MS4A3-206ENST00000528298 ARAP3Q8WWN8 1544 aa18.77■□□□□ 0.6
MS4A3-206ENST00000528298 NEO1Q92859 1461 aa18.76■□□□□ 0.59
MS4A3-206ENST00000528298 CCDC18Q5T9S5 1454 aa18.74■□□□□ 0.59
MS4A3-206ENST00000528298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.73■□□□□ 0.59
MS4A3-206ENST00000528298 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
MS4A3-206ENST00000528298 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
MS4A3-206ENST00000528298 FYCO1Q9BQS8 1478 aa18.71■□□□□ 0.59
MS4A3-206ENST00000528298 TROQ12816 1431 aaPredicted RBP18.71■□□□□ 0.59
MS4A3-206ENST00000528298 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
MS4A3-206ENST00000528298 PLCH2O75038 1416 aa18.69■□□□□ 0.58
MS4A3-206ENST00000528298 EFCAB2Q5VUJ9 269 aa18.68■□□□□ 0.58
MS4A3-206ENST00000528298 PCF11O94913 1555 aaKnown RBP18.68■□□□□ 0.58
MS4A3-206ENST00000528298 AKNAQ7Z591 1439 aa18.67■□□□□ 0.58
MS4A3-206ENST00000528298 LRRIQ1Q96JM4 1722 aa18.67■□□□□ 0.58
MS4A3-206ENST00000528298 FANCAO15360 1455 aa18.66■□□□□ 0.58
MS4A3-206ENST00000528298 TTC37Q6PGP7 1564 aa18.65■□□□□ 0.58
MS4A3-206ENST00000528298 CFAP74Q9C0B2 1584 aa18.65■□□□□ 0.58
MS4A3-206ENST00000528298 RAPGEF3O95398 923 aa18.65■□□□□ 0.58
MS4A3-206ENST00000528298 KDM4FA0A1W2PPD8 638 aa18.63■□□□□ 0.57
MS4A3-206ENST00000528298 KIF14Q15058 1648 aa18.63■□□□□ 0.57
MS4A3-206ENST00000528298 DENND4BO75064 1496 aaPredicted RBP18.62■□□□□ 0.57
MS4A3-206ENST00000528298 MYO5CQ9NQX4 1742 aa18.59■□□□□ 0.57
MS4A3-206ENST00000528298 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
MS4A3-206ENST00000528298 ADGRL1O94910 1474 aa18.56■□□□□ 0.56
MS4A3-206ENST00000528298 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
MS4A3-206ENST00000528298 MAGI2Q86UL8 1455 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms