RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ANP32AP39687 249 aaKnown RBP17.22■□□□□ 0.35
TSKU-203ENST00000527881 RAB3GAP2Q9H2M9 1393 aa17.21■□□□□ 0.35
TSKU-203ENST00000527881 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
TSKU-203ENST00000527881 CCNB3Q8WWL7 1395 aa17.2■□□□□ 0.34
TSKU-203ENST00000527881 KIF21BO75037 1637 aa17.19■□□□□ 0.34
TSKU-203ENST00000527881 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
TSKU-203ENST00000527881 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
TSKU-203ENST00000527881 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
TSKU-203ENST00000527881 NACADO15069 1562 aa17.17■□□□□ 0.34
TSKU-203ENST00000527881 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
TSKU-203ENST00000527881 EIF5BO60841 1220 aaKnown RBP17.14■□□□□ 0.33
TSKU-203ENST00000527881 SMARCA2P51531 1590 aa17.14■□□□□ 0.33
TSKU-203ENST00000527881 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
TSKU-203ENST00000527881 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
TSKU-203ENST00000527881 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
TSKU-203ENST00000527881 RRBP1Q9P2E9 1410 aaKnown RBP17.08■□□□□ 0.33
TSKU-203ENST00000527881 IPO9Q96P70 1041 aaKnown RBP17.07■□□□□ 0.32
TSKU-203ENST00000527881 ATP1B4Q9UN42 357 aaPredicted RBP17.05■□□□□ 0.32
TSKU-203ENST00000527881 TONSLQ96HA7 1378 aa17.05■□□□□ 0.32
TSKU-203ENST00000527881 MAPKBP1O60336 1514 aa17.05■□□□□ 0.32
TSKU-203ENST00000527881 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
TSKU-203ENST00000527881 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
TSKU-203ENST00000527881 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
TSKU-203ENST00000527881 NEFMP07197 916 aa17.01■□□□□ 0.31
TSKU-203ENST00000527881 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
TSKU-203ENST00000527881 CUX2O14529 1486 aa16.99■□□□□ 0.31
TSKU-203ENST00000527881 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
TSKU-203ENST00000527881 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
TSKU-203ENST00000527881 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
TSKU-203ENST00000527881 UBE2Q2Q8WVN8 375 aa16.97■□□□□ 0.31
TSKU-203ENST00000527881 CCDC184Q52MB2 194 aa16.93■□□□□ 0.3
TSKU-203ENST00000527881 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
TSKU-203ENST00000527881 SMARCA4P51532 1647 aa16.91■□□□□ 0.3
TSKU-203ENST00000527881 BRPF3Q9ULD4 1205 aa16.88■□□□□ 0.29
TSKU-203ENST00000527881 ZBED9Q6R2W3 1325 aa16.84■□□□□ 0.29
TSKU-203ENST00000527881 HSPA5P11021 654 aaKnown RBP16.83■□□□□ 0.29
TSKU-203ENST00000527881 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
TSKU-203ENST00000527881 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
TSKU-203ENST00000527881 PPM1GO15355 546 aaPredicted RBP16.8■□□□□ 0.28
TSKU-203ENST00000527881 AKNAQ7Z591 1439 aa16.79■□□□□ 0.28
TSKU-203ENST00000527881 P3H3Q8IVL6 736 aa16.79■□□□□ 0.28
TSKU-203ENST00000527881 USP35Q9P2H5 1018 aa16.79■□□□□ 0.28
TSKU-203ENST00000527881 EIF4G2P78344 907 aaKnown RBP eCLIP16.78■□□□□ 0.28
TSKU-203ENST00000527881 DAXXQ9UER7 740 aaPredicted RBP16.78■□□□□ 0.28
TSKU-203ENST00000527881 PHLDB1Q86UU1 1377 aa16.78■□□□□ 0.28
TSKU-203ENST00000527881 PRKRIP1Q9H875 184 aaPredicted RBP16.77■□□□□ 0.28
TSKU-203ENST00000527881 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
TSKU-203ENST00000527881 GSE1Q14687 1217 aa16.73■□□□□ 0.27
TSKU-203ENST00000527881 PRXQ9BXM0 1461 aa16.72■□□□□ 0.27
TSKU-203ENST00000527881 ARHGAP35Q9NRY4 1499 aa16.72■□□□□ 0.27
TSKU-203ENST00000527881 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
TSKU-203ENST00000527881 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
TSKU-203ENST00000527881 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
TSKU-203ENST00000527881 PDE4AP27815 886 aa16.7■□□□□ 0.26
TSKU-203ENST00000527881 FHAD1B1AJZ9 1412 aa16.68■□□□□ 0.26
TSKU-203ENST00000527881 WASHC2CQ9Y4E1 1318 aa16.68■□□□□ 0.26
TSKU-203ENST00000527881 CNTLNQ9NXG0 1405 aa16.68■□□□□ 0.26
TSKU-203ENST00000527881 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
TSKU-203ENST00000527881 PKNOX2Q96KN3 472 aa16.66■□□□□ 0.26
TSKU-203ENST00000527881 FRAT1Q92837 279 aaPredicted RBP16.65■□□□□ 0.26
TSKU-203ENST00000527881 SLC4A3P48751 1232 aa16.65■□□□□ 0.26
TSKU-203ENST00000527881 LRRC9Q6ZRR7 1453 aa16.64■□□□□ 0.26
TSKU-203ENST00000527881 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
TSKU-203ENST00000527881 DDRGK1Q96HY6 314 aa16.63■□□□□ 0.25
TSKU-203ENST00000527881 NFKBIBQ15653 356 aa16.62■□□□□ 0.25
TSKU-203ENST00000527881 TIAM1Q13009 1591 aa16.62■□□□□ 0.25
TSKU-203ENST00000527881 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
TSKU-203ENST00000527881 SMG6Q86US8 1419 aaKnown RBP16.62■□□□□ 0.25
TSKU-203ENST00000527881 EXOC6Q8TAG9 804 aa16.62■□□□□ 0.25
TSKU-203ENST00000527881 CCDC18Q5T9S5 1454 aa16.61■□□□□ 0.25
TSKU-203ENST00000527881 GLIPR1L2Q4G1C9 344 aa16.61■□□□□ 0.25
TSKU-203ENST00000527881 BACH2Q9BYV9 841 aa16.59■□□□□ 0.25
TSKU-203ENST00000527881 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
TSKU-203ENST00000527881 TMC1Q8TDI8 760 aa16.58■□□□□ 0.24
TSKU-203ENST00000527881 RRP7BPQ9NSQ0 103 aa16.57■□□□□ 0.24
TSKU-203ENST00000527881 CHIC2Q9UKJ5 165 aa16.57■□□□□ 0.24
TSKU-203ENST00000527881 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
TSKU-203ENST00000527881 UACAQ9BZF9 1416 aa16.55■□□□□ 0.24
TSKU-203ENST00000527881 SKAP1Q86WV1 359 aa16.53■□□□□ 0.24
TSKU-203ENST00000527881 L3MBTL2Q969R5 705 aa16.53■□□□□ 0.24
TSKU-203ENST00000527881 ARXQ96QS3 562 aa16.52■□□□□ 0.24
TSKU-203ENST00000527881 RRP1P56182 461 aaKnown RBP16.52■□□□□ 0.24
TSKU-203ENST00000527881 VSIG10Q8N0Z9 540 aa16.52■□□□□ 0.24
TSKU-203ENST00000527881 FOXD1Q16676 465 aa16.51■□□□□ 0.23
TSKU-203ENST00000527881 ZNF326Q5BKZ1 582 aaKnown RBP16.51■□□□□ 0.23
TSKU-203ENST00000527881 MS4A1P11836 297 aa16.51■□□□□ 0.23
TSKU-203ENST00000527881 KIF7Q2M1P5 1343 aa16.5■□□□□ 0.23
TSKU-203ENST00000527881 RNF123Q5XPI4 1314 aa16.5■□□□□ 0.23
TSKU-203ENST00000527881 FAM43AQ8N2R8 423 aa16.49■□□□□ 0.23
TSKU-203ENST00000527881 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
TSKU-203ENST00000527881 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
TSKU-203ENST00000527881 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
TSKU-203ENST00000527881 MTUS2Q5JR59 1369 aa16.47■□□□□ 0.23
TSKU-203ENST00000527881 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
TSKU-203ENST00000527881 NAP1L5Q96NT1 182 aaPredicted RBP16.46■□□□□ 0.22
TSKU-203ENST00000527881 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
TSKU-203ENST00000527881 NCOA1Q15788 1441 aa16.45■□□□□ 0.22
TSKU-203ENST00000527881 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
TSKU-203ENST00000527881 FMN1Q68DA7 1419 aa16.44■□□□□ 0.22
TSKU-203ENST00000527881 PLIN1O60240 522 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms